RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 NWD2Q9ULI1 1742 aa0.18□□□□□ -2.38
LEMD3-206ENST00000545026 AHCTF1Q8WYP5 2266 aa0.18□□□□□ -2.38
LEMD3-206ENST00000545026 HIVEP3Q5T1R4 2406 aa0.18□□□□□ -2.38
LEMD3-206ENST00000545026 UBR5O95071 2799 aaPredicted RBP0.17□□□□□ -2.38
LEMD3-206ENST00000545026 PIGBOS1A0A0B4J2F0 54 aa0.16□□□□□ -2.38
LEMD3-206ENST00000545026 PPP1R17O96001 155 aa0.16□□□□□ -2.38
LEMD3-206ENST00000545026 CFAP126Q5VTH2 177 aa0.16□□□□□ -2.38
LEMD3-206ENST00000545026 FAM208BQ5VWN6 2430 aa0.16□□□□□ -2.38
LEMD3-206ENST00000545026 PIN1P1O15428 100 aa0.15□□□□□ -2.39
LEMD3-206ENST00000545026 NAA60Q9H7X0 242 aa0.15□□□□□ -2.39
LEMD3-206ENST00000545026 CELSR1Q9NYQ6 3014 aa0.15□□□□□ -2.39
LEMD3-206ENST00000545026 MBD5Q9P267 1494 aa0.15□□□□□ -2.39
LEMD3-206ENST00000545026 C10orf128Q5T292 105 aa0.14□□□□□ -2.39
LEMD3-206ENST00000545026 AQP10Q96PS8 301 aa0.14□□□□□ -2.39
LEMD3-206ENST00000545026 SPTBN2O15020 2390 aa0.13□□□□□ -2.39
LEMD3-206ENST00000545026 BTG2P78543 158 aa0.13□□□□□ -2.39
LEMD3-206ENST00000545026 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.13□□□□□ -2.39
LEMD3-206ENST00000545026 MRC1P22897 1456 aa0.13□□□□□ -2.39
LEMD3-206ENST00000545026 R4GMQ9 66 aa0.12□□□□□ -2.39
LEMD3-206ENST00000545026 COL7A1Q02388 2944 aa0.12□□□□□ -2.39
LEMD3-206ENST00000545026 CACNA1CQ13936 2221 aa0.11□□□□□ -2.39
LEMD3-206ENST00000545026 FOCADQ5VW36 1801 aa0.11□□□□□ -2.39
LEMD3-206ENST00000545026 PRDM2Q13029 1718 aa0.11□□□□□ -2.39
LEMD3-206ENST00000545026 LOC100130705A0A1B0GUX0 176 aa0.11□□□□□ -2.39
LEMD3-206ENST00000545026 ARAP2Q8WZ64 1704 aa0.1□□□□□ -2.39
LEMD3-206ENST00000545026 TTC9CQ8N5M4 171 aa0.1□□□□□ -2.39
LEMD3-206ENST00000545026 C1orf54Q8WWF1 131 aa0.1□□□□□ -2.39
LEMD3-206ENST00000545026 LENEPQ9Y5L5 61 aa0.1□□□□□ -2.39
LEMD3-206ENST00000545026 ZNF609O15014 1411 aa0.1□□□□□ -2.39
LEMD3-206ENST00000545026 MYH9P35579 1960 aaKnown RBP0.1□□□□□ -2.39
LEMD3-206ENST00000545026 ZNF292O60281 2723 aa0.09□□□□□ -2.39
LEMD3-206ENST00000545026 M0R135 149 aa0.09□□□□□ -2.4
LEMD3-206ENST00000545026 SPINK8P0C7L1 97 aa0.09□□□□□ -2.4
LEMD3-206ENST00000545026 CNFNQ9BYD5 112 aa0.09□□□□□ -2.4
LEMD3-206ENST00000545026 U3KQA8 63 aa0.09□□□□□ -2.4
LEMD3-206ENST00000545026 PPIP5K1Q6PFW1 1433 aa0.08□□□□□ -2.4
LEMD3-206ENST00000545026 FGF7P21781 194 aa0.08□□□□□ -2.4
LEMD3-206ENST00000545026 Q56UQ5 140 aa0.08□□□□□ -2.4
LEMD3-206ENST00000545026 CYP4F30PQ9H0H9 118 aa0.08□□□□□ -2.4
LEMD3-206ENST00000545026 NPVFQ9HCQ7 196 aa0.07□□□□□ -2.4
LEMD3-206ENST00000545026 SCN3BQ9NY72 215 aa0.07□□□□□ -2.4
LEMD3-206ENST00000545026 NAIPQ13075 1403 aa0.06□□□□□ -2.4
LEMD3-206ENST00000545026 DOCK1Q14185 1865 aa0.06□□□□□ -2.4
LEMD3-206ENST00000545026 A0A0D9SFI3 127 aa0.06□□□□□ -2.4
LEMD3-206ENST00000545026 MIF4GDA9UHW6 222 aaKnown RBP0.06□□□□□ -2.4
LEMD3-206ENST00000545026 SPAG11BQ08648 103 aa0.06□□□□□ -2.4
LEMD3-206ENST00000545026 SPAG11AQ6PDA7 123 aa0.06□□□□□ -2.4
LEMD3-206ENST00000545026 PATJQ8NI35 1801 aa0.06□□□□□ -2.4
LEMD3-206ENST00000545026 BCL9LQ86UU0 1499 aa0.05□□□□□ -2.4
LEMD3-206ENST00000545026 PPP3R2Q96LZ3 170 aa0.05□□□□□ -2.4
LEMD3-206ENST00000545026 PRO0255Q9UI72 69 aa0.05□□□□□ -2.4
LEMD3-206ENST00000545026 V9GYH0 126 aa0.04□□□□□ -2.4
LEMD3-206ENST00000545026 MYH7P12883 1935 aa0.03□□□□□ -2.4
LEMD3-206ENST00000545026 BIVM-ERCC5R4GMW8 1640 aa0.03□□□□□ -2.4
LEMD3-206ENST00000545026 CTXND1A0A1B0GTU2 59 aa0.03□□□□□ -2.4
LEMD3-206ENST00000545026 PI4KAP42356 2102 aa0.03□□□□□ -2.4
LEMD3-206ENST00000545026 C2CD3Q4AC94 2353 aa0.03□□□□□ -2.41
LEMD3-206ENST00000545026 MYH8P13535 1937 aa0.03□□□□□ -2.41
LEMD3-206ENST00000545026 APOC2P02655 101 aa0.02□□□□□ -2.41
LEMD3-206ENST00000545026 CATR1Q13166 79 aa0.02□□□□□ -2.41
LEMD3-206ENST00000545026 SMIM4Q8WVI0 70 aa0.02□□□□□ -2.41
LEMD3-206ENST00000545026 CPSF1Q10570 1443 aaKnown RBP0.02□□□□□ -2.41
LEMD3-206ENST00000545026 DSTQ03001 7570 aaKnown RBP0.01□□□□□ -2.41
LEMD3-206ENST00000545026 AMELXQ99217 191 aa0.01□□□□□ -2.41
LEMD3-206ENST00000545026 NDUFA4L2Q9NRX3 87 aa0.01□□□□□ -2.41
LEMD3-206ENST00000545026 ROCK2O75116 1388 aaKnown RBP0.01□□□□□ -2.41
LEMD3-206ENST00000545026 ABCA2Q9BZC7 2435 aa0.01□□□□□ -2.41
LEMD3-206ENST00000545026 SPANXDQ9BXN6 97 aa0□□□□□ -2.41
LEMD3-206ENST00000545026 WNK2Q9Y3S1 2297 aa-0.01□□□□□ -2.41
LEMD3-206ENST00000545026 LRRC37A2A6NM11 1700 aa-0.01□□□□□ -2.41
LEMD3-206ENST00000545026 NHSL1Q5SYE7 1610 aa-0.01□□□□□ -2.41
LEMD3-206ENST00000545026 AKAIN1P0CW23 69 aa-0.01□□□□□ -2.41
LEMD3-206ENST00000545026 SPRR2GQ9BYE4 73 aa-0.01□□□□□ -2.41
LEMD3-206ENST00000545026 AKAP6Q13023 2319 aa-0.01□□□□□ -2.41
LEMD3-206ENST00000545026 NCOR1O75376 2440 aa-0.02□□□□□ -2.41
LEMD3-206ENST00000545026 IFITM1P13164 125 aa-0.02□□□□□ -2.41
LEMD3-206ENST00000545026 RPL13AP3Q6NVV1 102 aa-0.02□□□□□ -2.41
LEMD3-206ENST00000545026 TSLPQ969D9 159 aa-0.02□□□□□ -2.41
LEMD3-206ENST00000545026 CACNA1AO00555 2505 aa-0.02□□□□□ -2.41
LEMD3-206ENST00000545026 SHROOM2Q13796 1616 aa-0.02□□□□□ -2.41
LEMD3-206ENST00000545026 KDM3BQ7LBC6 1761 aa-0.03□□□□□ -2.41
LEMD3-206ENST00000545026 TRBV7-3A0A075B6L6 115 aa-0.03□□□□□ -2.41
LEMD3-206ENST00000545026 C8orf59Q8N0T1 100 aaPredicted RBP-0.03□□□□□ -2.41
LEMD3-206ENST00000545026 PP6455Q8WZ26 134 aa-0.03□□□□□ -2.41
LEMD3-206ENST00000545026 QRICH2Q9H0J4 1663 aa-0.03□□□□□ -2.41
LEMD3-206ENST00000545026 PTPRQQ9UMZ3 2332 aa-0.03□□□□□ -2.41
LEMD3-206ENST00000545026 A2ML1A8K2U0 1454 aa-0.03□□□□□ -2.41
LEMD3-206ENST00000545026 HAMPP81172 84 aa-0.04□□□□□ -2.42
LEMD3-206ENST00000545026 C5orf38Q86SI9 138 aa-0.04□□□□□ -2.42
LEMD3-206ENST00000545026 MGST2Q99735 147 aa-0.04□□□□□ -2.42
LEMD3-206ENST00000545026 CSMD3Q7Z407 3707 aa-0.04□□□□□ -2.42
LEMD3-206ENST00000545026 MYCBP2O75592 4640 aa-0.05□□□□□ -2.42
LEMD3-206ENST00000545026 ZNF236Q9UL36 1845 aa-0.05□□□□□ -2.42
LEMD3-206ENST00000545026 EFCAB10A6NFE3 127 aa-0.05□□□□□ -2.42
LEMD3-206ENST00000545026 BCE1O60756 84 aa-0.05□□□□□ -2.42
LEMD3-206ENST00000545026 DYNLRB1Q9NP97 96 aa-0.05□□□□□ -2.42
LEMD3-206ENST00000545026 NEBP20929 6669 aa-0.05□□□□□ -2.42
LEMD3-206ENST00000545026 LRP6O75581 1613 aa-0.05□□□□□ -2.42
LEMD3-206ENST00000545026 LAMC1P11047 1609 aa-0.05□□□□□ -2.42
LEMD3-206ENST00000545026 DOCK2Q92608 1830 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms