RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, humanhuman

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-205ENST00000544506 FOCADQ5VW36 1801 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 TECPR2O15040 1411 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 DIP2BQ9P265 1576 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 LRP5O75197 1615 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 LRP6O75581 1613 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 PAPPAQ13219 1627 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 TET3O43151 1660 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 FAM208AQ9UK61 1670 aaKnown RBP1.04□□□□□ -2.24
LEMD3-205ENST00000544506 NWD2Q9ULI1 1742 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 STRCQ7RTU9 1775 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 BTAF1O14981 1849 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 SBF2Q86WG5 1849 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 PLXNA4Q9HCM2 1894 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 TRAV12-2A0A075B6T6 113 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 CTXND1A0A1B0GTU2 59 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 UBE2L5PA0A1B0GUS4 154 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 RBP4P02753 201 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 ASAH2BP0C7U1 165 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 MGST1P10620 155 aaKnown RBP1.04□□□□□ -2.24
LEMD3-205ENST00000544506 FGF6P10767 208 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 CRYGAP11844 174 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 CYBAP13498 195 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 COX7CP15954 63 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 CBLN1P23435 193 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 SSR2P43308 183 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 FXYD2P54710 66 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 FOXA3P55318 350 aaPredicted RBP1.04□□□□□ -2.24
LEMD3-205ENST00000544506 CCL8P80075 99 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 RPL18Q07020 188 aaKnown RBP1.04□□□□□ -2.24
LEMD3-205ENST00000544506 WFDC2Q14508 124 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 C10orf55Q5SWW7 151 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 TMEM170BQ5T4T1 132 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 FKBP1CQ5VVH2 108 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 NCBP2-AS2Q69YL0 99 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 HRCT1Q6UXD1 115 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 OR5AS1Q8N127 324 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 TMEM86BQ8N661 226 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 OTOSQ8NHW6 89 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 TSKUQ8WUA8 353 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 DPH3Q96FX2 82 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 GPX7Q96SL4 187 aaPredicted RBP1.04□□□□□ -2.24
LEMD3-205ENST00000544506 TRGV9Q99603 122 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 C20orf78Q9BR46 151 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 AGPAT4-IT1Q9H0P7 198 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 RNASE7Q9H1E1 156 aaKnown RBP1.04□□□□□ -2.24
LEMD3-205ENST00000544506 DYNLRB1Q9NP97 96 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 SERP1Q9Y6X1 66 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 EML6Q6ZMW3 1958 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 DOCK4Q8N1I0 1966 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 KIAA1549Q9HCM3 1950 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 CASP8AP2Q9UKL3 1982 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 SCN7AQ01118 1682 aa1.04□□□□□ -2.24
LEMD3-205ENST00000544506 TJP1Q07157 1748 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 COL24A1Q17RW2 1714 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 RICTORQ6R327 1708 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 PKD1L3Q7Z443 1732 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 TIAM2Q8IVF5 1701 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 BCORQ6W2J9 1755 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 UBR2Q8IWV8 1755 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 KIDINS220Q9ULH0 1771 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 ARFGEF1Q9Y6D6 1849 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 NUP210Q8TEM1 1887 aaPredicted RBP1.03□□□□□ -2.24
LEMD3-205ENST00000544506 HEATR1Q9H583 2144 aaKnown RBP1.03□□□□□ -2.24
LEMD3-205ENST00000544506 TECTAO75443 2155 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 POLEQ07864 2286 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 ROS1P08922 2347 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 TRBV19A0A075B6N1 114 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 TRAV26-2A0A0B4J265 109 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 LOC107984156A0A0G2JMH3 177 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 LOC107984640A0A0U1RRK4 108 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 FAM236DA0A1B0GTK5 79 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 MYMXA0A1B0GTQ4 84 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 A0A1B0GWA3 101 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 LOC107986453A0A1B0GWG9 222 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 LINC01549A6NIU2 74 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 C2orf70A6NJV1 201 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 OOSP1A8MZH6 123 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 H3BVH4 76 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 NDUFC1O43677 76 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 NUPR1O60356 82 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 IGKCP01834 107 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 GYPBP06028 91 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 FAM236CP0DP71 79 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 HLA-DRB4P13762 266 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 GCHFRP30047 84 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 FCER1GP30273 86 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 SUPT4H1P63272 117 aaKnown RBP1.03□□□□□ -2.24
LEMD3-205ENST00000544506 ATXN8Q156A1 80 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 S100A7L2Q5SY68 101 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 CFAP126Q5VTH2 177 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 C22orf39Q6P5X5 142 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 TMEM14EPQ6UXP3 125 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 RPS27LQ71UM5 84 aaKnown RBP1.03□□□□□ -2.24
LEMD3-205ENST00000544506 AAED1Q7RTV5 226 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 LINC00305Q7Z4B0 112 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 ARL17AQ8IVW1 177 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 C1orf158Q8N1D5 194 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 FAM19A2Q8N3H0 131 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 SERP2Q8N6R1 65 aa1.03□□□□□ -2.24
LEMD3-205ENST00000544506 MYOZ3Q8TDC0 251 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms