RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 CBLN1P23435 193 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 SDIM1Q6ZPB5 146 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 TMEM167AQ8TBQ9 72 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 ACOT12Q8WYK0 555 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 BORCS5Q969J3 196 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 APOBP04114 4563 aaKnown RBP1.79□□□□□ -2.12
SCFD1-207ENST00000544052 TRAV1-2A0A0B4J238 106 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 TRAV4A0A0B4J268 109 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 TRDV1A0A1B0GX56 115 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 SDHAF1A6NFY7 115 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 FAM223BA6NKX1 122 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 PPBPP02775 128 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 CTSGP08311 255 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 ZNF705DP0CH99 300 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-207ENST00000544052 RPL7P18124 248 aaKnown RBP1.79□□□□□ -2.12
SCFD1-207ENST00000544052 WT1-ASQ06250 92 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 FAM223AQ8IWN6 122 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 OR10P1Q8NGE3 313 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 OR5C1Q8NGR4 320 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 USMG5Q96IX5 58 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 DNAJC30Q96LL9 226 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 FXYD6Q9H0Q3 95 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 TXNL4BQ9NX01 149 aaKnown RBP1.79□□□□□ -2.12
SCFD1-207ENST00000544052 TAS2R8Q9NYW2 309 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 LRP1BQ9NZR2 4599 aa1.79□□□□□ -2.12
SCFD1-207ENST00000544052 MEIS3P1A6NDR6 274 aa1.78□□□□□ -2.12
SCFD1-207ENST00000544052 K7EIM0 57 aa1.78□□□□□ -2.12
SCFD1-207ENST00000544052 GGCTO75223 188 aaKnown RBP1.78□□□□□ -2.12
SCFD1-207ENST00000544052 CDS2O95674 445 aa1.78□□□□□ -2.12
SCFD1-207ENST00000544052 IGKV1-5P01602 117 aa1.78□□□□□ -2.12
SCFD1-207ENST00000544052 RPL27AP46776 148 aaKnown RBP1.78□□□□□ -2.12
SCFD1-207ENST00000544052 ZNF80P51504 273 aaPredicted RBP1.78□□□□□ -2.12
SCFD1-207ENST00000544052 RTL8BQ17RB0 113 aa1.78□□□□□ -2.12
SCFD1-207ENST00000544052 DEFB135Q30KP9 77 aa1.78□□□□□ -2.12
SCFD1-207ENST00000544052 VMA21Q3ZAQ7 101 aa1.78□□□□□ -2.12
SCFD1-207ENST00000544052 IZUMO2Q6UXV1 221 aa1.78□□□□□ -2.12
SCFD1-207ENST00000544052 ZNF818PQ6ZRF7 136 aa1.78□□□□□ -2.12
SCFD1-207ENST00000544052 PBDC1Q9BVG4 233 aa1.78□□□□□ -2.12
SCFD1-207ENST00000544052 COMMD5Q9GZQ3 224 aa1.78□□□□□ -2.12
SCFD1-207ENST00000544052 CCDC90BQ9GZT6 254 aa1.78□□□□□ -2.12
SCFD1-207ENST00000544052 ATG5Q9H1Y0 275 aa1.78□□□□□ -2.12
SCFD1-207ENST00000544052 SH3BGRL3Q9H299 93 aa1.78□□□□□ -2.12
SCFD1-207ENST00000544052 C11orf1Q9H5F2 150 aa1.78□□□□□ -2.12
SCFD1-207ENST00000544052 MRPL36Q9P0J6 103 aaKnown RBP1.78□□□□□ -2.12
SCFD1-207ENST00000544052 PPYP01298 95 aa1.78□□□□□ -2.13
SCFD1-207ENST00000544052 SDC2P34741 201 aa1.78□□□□□ -2.13
SCFD1-207ENST00000544052 DYNLRB2Q8TF09 96 aa1.78□□□□□ -2.13
SCFD1-207ENST00000544052 GPR146Q96CH1 333 aa1.78□□□□□ -2.13
SCFD1-207ENST00000544052 GINS4Q9BRT9 223 aa1.78□□□□□ -2.13
SCFD1-207ENST00000544052 UPK3BQ9BT76 320 aa1.78□□□□□ -2.13
SCFD1-207ENST00000544052 C6orf62Q9GZU0 229 aaPredicted RBP1.78□□□□□ -2.13
SCFD1-207ENST00000544052 TUBA4BQ9H853 241 aa1.78□□□□□ -2.13
SCFD1-207ENST00000544052 SCN3BQ9NY72 215 aa1.78□□□□□ -2.13
SCFD1-207ENST00000544052 BET1LQ9NYM9 111 aa1.78□□□□□ -2.13
SCFD1-207ENST00000544052 TPRKBQ9Y3C4 175 aa1.78□□□□□ -2.13
SCFD1-207ENST00000544052 HSPB11Q9Y547 144 aa1.78□□□□□ -2.13
SCFD1-207ENST00000544052 A0A087WX48 190 aa1.77□□□□□ -2.13
SCFD1-207ENST00000544052 I3L2K1 104 aa1.77□□□□□ -2.13
SCFD1-207ENST00000544052 IGHV3-30-3P0DP02 117 aa1.77□□□□□ -2.13
SCFD1-207ENST00000544052 SCGB1A1P11684 91 aa1.77□□□□□ -2.13
SCFD1-207ENST00000544052 AKR1C2P52895 323 aa1.77□□□□□ -2.13
SCFD1-207ENST00000544052 PIGPP57054 158 aa1.77□□□□□ -2.13
SCFD1-207ENST00000544052 TAS2R45P59539 299 aa1.77□□□□□ -2.13
SCFD1-207ENST00000544052 FXYD4P59646 89 aa1.77□□□□□ -2.13
SCFD1-207ENST00000544052 Q6Q795 121 aa1.77□□□□□ -2.13
SCFD1-207ENST00000544052 AMTNQ6UX39 209 aa1.77□□□□□ -2.13
SCFD1-207ENST00000544052 HRCT1Q6UXD1 115 aa1.77□□□□□ -2.13
SCFD1-207ENST00000544052 TCF24Q7RTU0 167 aa1.77□□□□□ -2.13
SCFD1-207ENST00000544052 DCANP1Q8TF63 244 aa1.77□□□□□ -2.13
SCFD1-207ENST00000544052 NDUFA4L2Q9NRX3 87 aa1.77□□□□□ -2.13
SCFD1-207ENST00000544052 RBM7Q9Y580 266 aaKnown RBP1.77□□□□□ -2.13
SCFD1-207ENST00000544052 TRAV9-1A0A075B6T8 112 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 OR2T8A6NH00 312 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 C1orf196B1AJZ1 125 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 PDCD5O14737 125 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 DEFB4AO15263 64 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 PGLYRP1O75594 196 aaPredicted RBP1.76□□□□□ -2.13
SCFD1-207ENST00000544052 NDUFC2O95298 119 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 LY6G6CO95867 125 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 CTSDP07339 412 aaPredicted RBP1.76□□□□□ -2.13
SCFD1-207ENST00000544052 OR10J4P0C629 311 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 LGALS3P17931 250 aaKnown RBP1.76□□□□□ -2.13
SCFD1-207ENST00000544052 G6PCP35575 357 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 EMP1P54849 157 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 GNG2P59768 71 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 MSMO1Q15800 293 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 SPINK9Q5DT21 86 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 AADACL3Q5VUY0 350 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 RASL11AQ6T310 242 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 NKX6-2Q9C056 277 aaPredicted RBP1.76□□□□□ -2.13
SCFD1-207ENST00000544052 IL36BQ9NZH7 164 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 TRBV7-1A0A0A6YYK4 115 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 UBE2L6O14933 153 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 LEPROTO15243 131 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 ZNF73O43830 326 aaPredicted RBP1.76□□□□□ -2.13
SCFD1-207ENST00000544052 PMP2P02689 132 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 SRP19P09132 144 aaKnown RBP1.76□□□□□ -2.13
SCFD1-207ENST00000544052 NPPCP23582 126 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 HLA-DMBP28068 263 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 AKR1C3P42330 323 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms