RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 DNAJC30Q96LL9 226 aa11.17□□□□□ -0.62
XRCC1-202ENST00000543982 C20orf202A1L168 122 aa11.17□□□□□ -0.62
XRCC1-202ENST00000543982 I3L3M4 83 aa11.17□□□□□ -0.62
XRCC1-202ENST00000543982 CRYBA4P53673 196 aa11.17□□□□□ -0.62
XRCC1-202ENST00000543982 C11orf45Q8TAV5 145 aa11.17□□□□□ -0.62
XRCC1-202ENST00000543982 TOMM6Q96B49 74 aa11.17□□□□□ -0.62
XRCC1-202ENST00000543982 A0A0J9YY99 117 aa11.16□□□□□ -0.62
XRCC1-202ENST00000543982 F5H768 121 aa11.16□□□□□ -0.62
XRCC1-202ENST00000543982 H0Y8G0 127 aa11.16□□□□□ -0.62
XRCC1-202ENST00000543982 ATP5LO75964 103 aa11.16□□□□□ -0.62
XRCC1-202ENST00000543982 ATP5G1P05496 136 aa11.16□□□□□ -0.62
XRCC1-202ENST00000543982 ZNRF2Q8NHG8 242 aa11.16□□□□□ -0.62
XRCC1-202ENST00000543982 IGHV3-38A0A0C4DH36 116 aa11.16□□□□□ -0.62
XRCC1-202ENST00000543982 TRBV6-4A0A1B0GX49 114 aa11.16□□□□□ -0.62
XRCC1-202ENST00000543982 GAGE12JA6NER3 117 aa11.16□□□□□ -0.62
XRCC1-202ENST00000543982 GAGE1Q13065 139 aa11.16□□□□□ -0.62
XRCC1-202ENST00000543982 GAGE4Q13068 117 aa11.16□□□□□ -0.62
XRCC1-202ENST00000543982 GAGE5Q13069 117 aa11.16□□□□□ -0.62
XRCC1-202ENST00000543982 GAGE13Q4V321 117 aa11.16□□□□□ -0.62
XRCC1-202ENST00000543982 LINC01545Q5VT33 79 aa11.16□□□□□ -0.62
XRCC1-202ENST00000543982 C2orf66Q6UXQ4 117 aa11.16□□□□□ -0.62
XRCC1-202ENST00000543982 LINC01549A6NIU2 74 aa11.15□□□□□ -0.62
XRCC1-202ENST00000543982 ZNF664Q8N3J9 261 aa11.15□□□□□ -0.62
XRCC1-202ENST00000543982 TRBV10-1A0A0K0K1A3 114 aa11.14□□□□□ -0.63
XRCC1-202ENST00000543982 PCP4L1A6NKN8 68 aa11.14□□□□□ -0.63
XRCC1-202ENST00000543982 RHOHQ15669 191 aa11.14□□□□□ -0.63
XRCC1-202ENST00000543982 PHLDA1Q8WV24 401 aaPredicted RBP11.14□□□□□ -0.63
XRCC1-202ENST00000543982 TRAV26-1A0A087WT03 109 aa11.14□□□□□ -0.63
XRCC1-202ENST00000543982 TSHBP01222 138 aa11.14□□□□□ -0.63
XRCC1-202ENST00000543982 VAMP8Q9BV40 100 aa11.14□□□□□ -0.63
XRCC1-202ENST00000543982 PRO0255Q9UI72 69 aa11.14□□□□□ -0.63
XRCC1-202ENST00000543982 CYSLTR1Q9Y271 337 aa11.14□□□□□ -0.63
XRCC1-202ENST00000543982 TEX48A0A1B0GUV7 120 aa11.13□□□□□ -0.63
XRCC1-202ENST00000543982 NHLRC4P0CG21 123 aaPredicted RBP11.13□□□□□ -0.63
XRCC1-202ENST00000543982 SCGB3A1Q96QR1 104 aa11.13□□□□□ -0.63
XRCC1-202ENST00000543982 TRBV7-3A0A075B6L6 115 aa11.12□□□□□ -0.63
XRCC1-202ENST00000543982 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.12□□□□□ -0.63
XRCC1-202ENST00000543982 PAX4O43316 350 aa11.12□□□□□ -0.63
XRCC1-202ENST00000543982 GYPEP15421 78 aa11.12□□□□□ -0.63
XRCC1-202ENST00000543982 LGALS9CQ6DKI2 356 aa11.12□□□□□ -0.63
XRCC1-202ENST00000543982 ATOH7Q8N100 152 aa11.12□□□□□ -0.63
XRCC1-202ENST00000543982 PRSS1P07477 247 aa11.12□□□□□ -0.63
XRCC1-202ENST00000543982 LINC00694P0DN24 101 aa11.12□□□□□ -0.63
XRCC1-202ENST00000543982 UBE2D3P61077 147 aa11.12□□□□□ -0.63
XRCC1-202ENST00000543982 PKIAP61925 76 aa11.12□□□□□ -0.63
XRCC1-202ENST00000543982 UBE2D2P62837 147 aa11.12□□□□□ -0.63
XRCC1-202ENST00000543982 ERASQ7Z444 233 aa11.12□□□□□ -0.63
XRCC1-202ENST00000543982 A0A096LPF7 62 aa11.11□□□□□ -0.63
XRCC1-202ENST00000543982 RPL36AP83881 106 aaKnown RBP11.11□□□□□ -0.63
XRCC1-202ENST00000543982 RPL36ALQ969Q0 106 aaKnown RBP11.11□□□□□ -0.63
XRCC1-202ENST00000543982 PAM16Q9Y3D7 125 aa11.11□□□□□ -0.63
XRCC1-202ENST00000543982 TSTD3H0UI37 97 aa11.1□□□□□ -0.63
XRCC1-202ENST00000543982 PMCHL2Q9BQD1 86 aa11.1□□□□□ -0.63
XRCC1-202ENST00000543982 DEFB131BA0A096LNP1 70 aa11.1□□□□□ -0.63
XRCC1-202ENST00000543982 NTM-AS1Q6ZSK4 140 aa11.1□□□□□ -0.63
XRCC1-202ENST00000543982 PRADC1Q9BSG0 188 aa11.1□□□□□ -0.63
XRCC1-202ENST00000543982 PRO1933Q9H354 126 aa11.1□□□□□ -0.63
XRCC1-202ENST00000543982 TRAV9-2A0A087WT02 112 aa11.09□□□□□ -0.63
XRCC1-202ENST00000543982 RPL39P62891 51 aaKnown RBP11.09□□□□□ -0.63
XRCC1-202ENST00000543982 Q6ZN92 141 aa11.09□□□□□ -0.63
XRCC1-202ENST00000543982 C20orf203Q8NBC4 194 aa11.09□□□□□ -0.63
XRCC1-202ENST00000543982 IGIPA6NJ69 53 aa11.08□□□□□ -0.64
XRCC1-202ENST00000543982 ODF1Q14990 250 aa11.08□□□□□ -0.64
XRCC1-202ENST00000543982 COTL1Q14019 142 aa11.08□□□□□ -0.64
XRCC1-202ENST00000543982 DAZ4Q86SG3 579 aaKnown RBP11.08□□□□□ -0.64
XRCC1-202ENST00000543982 TIMM17AQ99595 171 aa11.08□□□□□ -0.64
XRCC1-202ENST00000543982 DAZ3Q9NR90 486 aaKnown RBP11.08□□□□□ -0.64
XRCC1-202ENST00000543982 MAJINQ3KP22 176 aa11.07□□□□□ -0.64
XRCC1-202ENST00000543982 SPATA45Q537H7 98 aa11.07□□□□□ -0.64
XRCC1-202ENST00000543982 TMEM141Q96I45 108 aa11.07□□□□□ -0.64
XRCC1-202ENST00000543982 TRAV12-1A0A0B4J245 112 aa11.07□□□□□ -0.64
XRCC1-202ENST00000543982 TGP01266 2768 aa11.06□□□□□ -0.64
XRCC1-202ENST00000543982 BAALCQ8WXS3 180 aa11.06□□□□□ -0.64
XRCC1-202ENST00000543982 A0A087WX48 190 aa11.05□□□□□ -0.64
XRCC1-202ENST00000543982 CHCHD7Q9BUK0 85 aa11.05□□□□□ -0.64
XRCC1-202ENST00000543982 HSBP1L1C9JCN9 74 aa11.05□□□□□ -0.64
XRCC1-202ENST00000543982 hDV102S1A0JD36 115 aa11.04□□□□□ -0.64
XRCC1-202ENST00000543982 ATP6V0E2Q8NHE4 81 aa11.04□□□□□ -0.64
XRCC1-202ENST00000543982 TRAV10A0A0B4J240 114 aa11.03□□□□□ -0.64
XRCC1-202ENST00000543982 MRPL35Q9NZE8 188 aaKnown RBP11.03□□□□□ -0.64
XRCC1-202ENST00000543982 PYGO1Q9Y3Y4 419 aa11.03□□□□□ -0.64
XRCC1-202ENST00000543982 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.02□□□□□ -0.65
XRCC1-202ENST00000543982 IGKV2-29A2NJV5 120 aaPredicted RBP11.02□□□□□ -0.65
XRCC1-202ENST00000543982 PRSS29PA6NIE9 313 aa11.02□□□□□ -0.65
XRCC1-202ENST00000543982 F8VRH5 84 aa11.02□□□□□ -0.65
XRCC1-202ENST00000543982 DPM2O94777 84 aa11.02□□□□□ -0.65
XRCC1-202ENST00000543982 IGKCP01834 107 aa11.02□□□□□ -0.65
XRCC1-202ENST00000543982 GTSF1LQ9H1H1 148 aa11.02□□□□□ -0.65
XRCC1-202ENST00000543982 DDTP30046 118 aa11.01□□□□□ -0.65
XRCC1-202ENST00000543982 PMVKQ15126 192 aa11.01□□□□□ -0.65
XRCC1-202ENST00000543982 CHTOPQ9Y3Y2 248 aaKnown RBP11.01□□□□□ -0.65
XRCC1-202ENST00000543982 PLNP26678 52 aa11.01□□□□□ -0.65
XRCC1-202ENST00000543982 MRPL23Q16540 153 aaKnown RBP11.01□□□□□ -0.65
XRCC1-202ENST00000543982 CEMP1Q6PRD7 247 aaPredicted RBP11.01□□□□□ -0.65
XRCC1-202ENST00000543982 ICOSQ9Y6W8 199 aa11.01□□□□□ -0.65
XRCC1-202ENST00000543982 DYNC2H1Q8NCM8 4307 aaKnown RBP11.01□□□□□ -0.65
XRCC1-202ENST00000543982 CSMD3Q7Z407 3707 aa11□□□□□ -0.65
XRCC1-202ENST00000543982 NPSP0C0P6 89 aa11□□□□□ -0.65
XRCC1-202ENST00000543982 IGLC3P0DOY3 106 aa11□□□□□ -0.65
XRCC1-202ENST00000543982 FAM104AQ969W3 186 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms