RNA–Protein interactions for RNA: ENST00000543262.5

ME3-212, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-212ENST00000543262 TRGV1A0A0A0MS02 117 aa14.82□□□□□ -0.04
ME3-212ENST00000543262 PRADC1Q9BSG0 188 aa14.82□□□□□ -0.04
ME3-212ENST00000543262 PF4P02776 101 aa14.81□□□□□ -0.04
ME3-212ENST00000543262 TMEM263Q8WUH6 116 aaKnown RBP14.81□□□□□ -0.04
ME3-212ENST00000543262 NSD1Q96L73 2696 aaPredicted RBP14.81□□□□□ -0.04
ME3-212ENST00000543262 GCSHP23434 173 aa14.81□□□□□ -0.04
ME3-212ENST00000543262 ZNRF2Q8NHG8 242 aa14.81□□□□□ -0.04
ME3-212ENST00000543262 NOTCH3Q9UM47 2321 aa14.8□□□□□ -0.04
ME3-212ENST00000543262 MYMXA0A1B0GTQ4 84 aa14.8□□□□□ -0.04
ME3-212ENST00000543262 VAMP3Q15836 100 aa14.8□□□□□ -0.04
ME3-212ENST00000543262 LINC00482Q8N8I6 264 aa14.8□□□□□ -0.04
ME3-212ENST00000543262 DNAJC30Q96LL9 226 aa14.8□□□□□ -0.04
ME3-212ENST00000543262 IGLV4-3A0A075B6K6 122 aa14.79□□□□□ -0.04
ME3-212ENST00000543262 Q6ZTI0 123 aa14.79□□□□□ -0.04
ME3-212ENST00000543262 SVIPQ8NHG7 77 aa14.78□□□□□ -0.04
ME3-212ENST00000543262 H3BRM9 83 aa14.77□□□□□ -0.04
ME3-212ENST00000543262 FXYD2P54710 66 aa14.77□□□□□ -0.04
ME3-212ENST00000543262 TMEM170BQ5T4T1 132 aa14.77□□□□□ -0.04
ME3-212ENST00000543262 ZNF479Q96JC4 524 aa14.77□□□□□ -0.04
ME3-212ENST00000543262 C2CD3Q4AC94 2353 aa14.77□□□□□ -0.04
ME3-212ENST00000543262 CIDEAO60543 219 aa14.77□□□□□ -0.05
ME3-212ENST00000543262 PHLDA1Q8WV24 401 aaPredicted RBP14.77□□□□□ -0.05
ME3-212ENST00000543262 VCX2Q9H322 139 aa14.77□□□□□ -0.05
ME3-212ENST00000543262 PYGO1Q9Y3Y4 419 aa14.77□□□□□ -0.05
ME3-212ENST00000543262 FN1P02751 2386 aaKnown RBP14.76□□□□□ -0.05
ME3-212ENST00000543262 IGHV3-38A0A0C4DH36 116 aa14.76□□□□□ -0.05
ME3-212ENST00000543262 HERVK_113P61574 105 aa14.76□□□□□ -0.05
ME3-212ENST00000543262 CEND1Q8N111 149 aa14.76□□□□□ -0.05
ME3-212ENST00000543262 CSNK1G2-AS1Q8NCQ2 148 aa14.76□□□□□ -0.05
ME3-212ENST00000543262 CHCHD7Q9BUK0 85 aa14.76□□□□□ -0.05
ME3-212ENST00000543262 NOP10Q9NPE3 64 aaKnown RBP14.76□□□□□ -0.05
ME3-212ENST00000543262 NFE4Q86UQ8 179 aa14.76□□□□□ -0.05
ME3-212ENST00000543262 FAM104AQ969W3 186 aa14.76□□□□□ -0.05
ME3-212ENST00000543262 C1QTNF4Q9BXJ3 329 aa14.76□□□□□ -0.05
ME3-212ENST00000543262 HIVEP1P15822 2718 aa14.75□□□□□ -0.05
ME3-212ENST00000543262 AMMECR1LQ6DCA0 310 aa14.75□□□□□ -0.05
ME3-212ENST00000543262 CEMP1Q6PRD7 247 aaPredicted RBP14.75□□□□□ -0.05
ME3-212ENST00000543262 TM2D2Q9BX73 214 aa14.75□□□□□ -0.05
ME3-212ENST00000543262 PLAC8L1A1L4L8 177 aa14.74□□□□□ -0.05
ME3-212ENST00000543262 ZNF815PA8K554 130 aa14.74□□□□□ -0.05
ME3-212ENST00000543262 RAB37Q96AX2 223 aa14.74□□□□□ -0.05
ME3-212ENST00000543262 TMEM238C9JI98 176 aa14.74□□□□□ -0.05
ME3-212ENST00000543262 DAZ2Q13117 558 aaKnown RBP14.74□□□□□ -0.05
ME3-212ENST00000543262 TAL2Q16559 108 aa14.74□□□□□ -0.05
ME3-212ENST00000543262 C16orf74Q96GX8 76 aa14.74□□□□□ -0.05
ME3-212ENST00000543262 C9orf118A6NHY6 69 aa14.73□□□□□ -0.05
ME3-212ENST00000543262 HIST1H4GQ99525 98 aa14.73□□□□□ -0.05
ME3-212ENST00000543262 OCIAD2Q56VL3 154 aa14.72□□□□□ -0.05
ME3-212ENST00000543262 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.72□□□□□ -0.05
ME3-212ENST00000543262 TRAV4A0A0B4J268 109 aa14.72□□□□□ -0.05
ME3-212ENST00000543262 A0A0J9YXV3 536 aa14.72□□□□□ -0.05
ME3-212ENST00000543262 IGKV2-29A2NJV5 120 aaPredicted RBP14.72□□□□□ -0.05
ME3-212ENST00000543262 SMIM13P0DJ93 91 aa14.72□□□□□ -0.05
ME3-212ENST00000543262 AMELXQ99217 191 aa14.72□□□□□ -0.05
ME3-212ENST00000543262 PLEKHB2Q96CS7 222 aa14.71□□□□□ -0.05
ME3-212ENST00000543262 UBE2D4Q9Y2X8 147 aa14.71□□□□□ -0.05
ME3-212ENST00000543262 TRBV7-3A0A075B6L6 115 aa14.7□□□□□ -0.06
ME3-212ENST00000543262 RRN3P1Q2M238 152 aa14.7□□□□□ -0.06
ME3-212ENST00000543262 SPATA3Q8NHX4 192 aa14.7□□□□□ -0.06
ME3-212ENST00000543262 NAA38Q9BRA0 125 aaKnown RBP14.7□□□□□ -0.06
ME3-212ENST00000543262 VWFP04275 2813 aa14.7□□□□□ -0.06
ME3-212ENST00000543262 H3BUT2 72 aa14.7□□□□□ -0.06
ME3-212ENST00000543262 TSPEAR-AS2P59090 65 aa14.7□□□□□ -0.06
ME3-212ENST00000543262 RNASE13Q5GAN3 156 aaKnown RBP14.7□□□□□ -0.06
ME3-212ENST00000543262 K7EQD1 137 aa14.69□□□□□ -0.06
ME3-212ENST00000543262 ZNF22P17026 224 aaPredicted RBP14.69□□□□□ -0.06
ME3-212ENST00000543262 CRYBA4P53673 196 aa14.69□□□□□ -0.06
ME3-212ENST00000543262 SCGB1D4Q6XE38 83 aa14.69□□□□□ -0.06
ME3-212ENST00000543262 SPANXA1Q9NS26 97 aa14.69□□□□□ -0.06
ME3-212ENST00000543262 GAGE12BA1L429 117 aa14.69□□□□□ -0.06
ME3-212ENST00000543262 GAGE7O76087 117 aa14.69□□□□□ -0.06
ME3-212ENST00000543262 GAGE12FP0CL80 117 aa14.69□□□□□ -0.06
ME3-212ENST00000543262 GAGE12GP0CL81 117 aa14.69□□□□□ -0.06
ME3-212ENST00000543262 GAGE12IP0CL82 117 aa14.69□□□□□ -0.06
ME3-212ENST00000543262 SLC25A29Q8N8R3 303 aa14.69□□□□□ -0.06
ME3-212ENST00000543262 NHP2Q9NX24 153 aaKnown RBP14.69□□□□□ -0.06
ME3-212ENST00000543262 TMEM223A0PJW6 202 aa14.68□□□□□ -0.06
ME3-212ENST00000543262 K7ERJ3 54 aa14.68□□□□□ -0.06
ME3-212ENST00000543262 CRLF1O75462 422 aa14.68□□□□□ -0.06
ME3-212ENST00000543262 TENM1Q9UKZ4 2725 aa14.68□□□□□ -0.06
ME3-212ENST00000543262 TRBV10-1A0A0K0K1A3 114 aa14.67□□□□□ -0.06
ME3-212ENST00000543262 RPL36AP83881 106 aaKnown RBP14.67□□□□□ -0.06
ME3-212ENST00000543262 RPL36ALQ969Q0 106 aaKnown RBP14.67□□□□□ -0.06
ME3-212ENST00000543262 OVOL2Q9BRP0 275 aa14.67□□□□□ -0.06
ME3-212ENST00000543262 TRGV2A0A075B6R0 118 aa14.66□□□□□ -0.06
ME3-212ENST00000543262 J3QQQ9 107 aa14.66□□□□□ -0.06
ME3-212ENST00000543262 MRPS36P82909 103 aaKnown RBP14.65□□□□□ -0.06
ME3-212ENST00000543262 INSL3P51460 131 aa14.65□□□□□ -0.06
ME3-212ENST00000543262 K7ERU9 68 aa14.64□□□□□ -0.07
ME3-212ENST00000543262 C9orf66Q5T8R8 295 aa14.64□□□□□ -0.07
ME3-212ENST00000543262 Q6ZUT4 128 aa14.64□□□□□ -0.07
ME3-212ENST00000543262 IGHV3-64A0A075B6Q5 118 aa14.64□□□□□ -0.07
ME3-212ENST00000543262 GAGE12JA6NER3 117 aa14.64□□□□□ -0.07
ME3-212ENST00000543262 LEPROTO15243 131 aa14.64□□□□□ -0.07
ME3-212ENST00000543262 LGALS3P17931 250 aaKnown RBP14.64□□□□□ -0.07
ME3-212ENST00000543262 GAGE4Q13068 117 aa14.64□□□□□ -0.07
ME3-212ENST00000543262 GAGE5Q13069 117 aa14.64□□□□□ -0.07
ME3-212ENST00000543262 GAGE13Q4V321 117 aa14.64□□□□□ -0.07
ME3-212ENST00000543262 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.64□□□□□ -0.07
ME3-212ENST00000543262 A0A0J9YY99 117 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms