RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 IGLV2-18A0A075B6J9 118 aa15.84■□□□□ 0.13
HOMER3-205ENST00000542541 K7EMI3 77 aa15.84■□□□□ 0.13
HOMER3-205ENST00000542541 IFI27P40305 119 aaPredicted RBP15.84■□□□□ 0.13
HOMER3-205ENST00000542541 C18orf32Q8TCD1 76 aa15.84■□□□□ 0.13
HOMER3-205ENST00000542541 CHCHD5Q9BSY4 110 aa15.84■□□□□ 0.13
HOMER3-205ENST00000542541 TMEM243Q9BU79 118 aa15.84■□□□□ 0.13
HOMER3-205ENST00000542541 LY6G6CO95867 125 aa15.83■□□□□ 0.12
HOMER3-205ENST00000542541 PKIAP61925 76 aa15.83■□□□□ 0.12
HOMER3-205ENST00000542541 LINC00476Q8WZB0 136 aa15.83■□□□□ 0.12
HOMER3-205ENST00000542541 Q9H8V8 135 aa15.82■□□□□ 0.12
HOMER3-205ENST00000542541 LYSTQ99698 3801 aa15.82■□□□□ 0.12
HOMER3-205ENST00000542541 SIVA1O15304 175 aa15.81■□□□□ 0.12
HOMER3-205ENST00000542541 UBE2L6O14933 153 aa15.8■□□□□ 0.12
HOMER3-205ENST00000542541 RAB5BP61020 215 aa15.8■□□□□ 0.12
HOMER3-205ENST00000542541 FA2HQ7L5A8 372 aa15.8■□□□□ 0.12
HOMER3-205ENST00000542541 WFDC10BQ8IUB3 73 aa15.8■□□□□ 0.12
HOMER3-205ENST00000542541 H7C423 109 aa15.79■□□□□ 0.12
HOMER3-205ENST00000542541 ESDP10768 282 aa15.79■□□□□ 0.12
HOMER3-205ENST00000542541 ORMDL2Q53FV1 153 aa15.79■□□□□ 0.12
HOMER3-205ENST00000542541 CHCHD7Q9BUK0 85 aa15.79■□□□□ 0.12
HOMER3-205ENST00000542541 TMEM262E9PQX1 116 aa15.79■□□□□ 0.12
HOMER3-205ENST00000542541 LAGE3Q14657 143 aa15.79■□□□□ 0.12
HOMER3-205ENST00000542541 TMEM18Q96B42 140 aa15.79■□□□□ 0.12
HOMER3-205ENST00000542541 KMT2CQ8NEZ4 4911 aaKnown RBP15.78■□□□□ 0.12
HOMER3-205ENST00000542541 Q0VG73 95 aa15.78■□□□□ 0.12
HOMER3-205ENST00000542541 NIT1Q86X76 327 aa15.78■□□□□ 0.12
HOMER3-205ENST00000542541 A0A087WX48 190 aa15.77■□□□□ 0.12
HOMER3-205ENST00000542541 C1orf196B1AJZ1 125 aa15.77■□□□□ 0.12
HOMER3-205ENST00000542541 LINC00614P0C842 121 aa15.77■□□□□ 0.12
HOMER3-205ENST00000542541 G0S2P27469 103 aa15.77■□□□□ 0.12
HOMER3-205ENST00000542541 DNAH1Q9P2D7 4330 aa15.77■□□□□ 0.12
HOMER3-205ENST00000542541 LINC01546A6NGU7 62 aa15.76■□□□□ 0.11
HOMER3-205ENST00000542541 DNAH10OSP0CZ25 163 aa15.76■□□□□ 0.11
HOMER3-205ENST00000542541 SMAGPQ0VAQ4 97 aa15.76■□□□□ 0.11
HOMER3-205ENST00000542541 GAGE6Q13070 117 aa15.76■□□□□ 0.11
HOMER3-205ENST00000542541 BAGE3Q86Y29 109 aa15.76■□□□□ 0.11
HOMER3-205ENST00000542541 AP5S1Q9NUS5 200 aa15.76■□□□□ 0.11
HOMER3-205ENST00000542541 ALMS1Q8TCU4 4167 aa15.76■□□□□ 0.11
HOMER3-205ENST00000542541 LINC01556Q5JQF7 62 aa15.76■□□□□ 0.11
HOMER3-205ENST00000542541 C20orf203Q8NBC4 194 aa15.76■□□□□ 0.11
HOMER3-205ENST00000542541 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.75■□□□□ 0.11
HOMER3-205ENST00000542541 TRAV9-2A0A087WT02 112 aa15.75■□□□□ 0.11
HOMER3-205ENST00000542541 IGKV2-29A2NJV5 120 aaPredicted RBP15.75■□□□□ 0.11
HOMER3-205ENST00000542541 K7EP13 123 aa15.74■□□□□ 0.11
HOMER3-205ENST00000542541 HIST1H2BKO60814 126 aa15.74■□□□□ 0.11
HOMER3-205ENST00000542541 HIST1H2BJP06899 126 aa15.74■□□□□ 0.11
HOMER3-205ENST00000542541 HIST1H2BOP23527 126 aa15.74■□□□□ 0.11
HOMER3-205ENST00000542541 HIST1H2BBP33778 126 aa15.74■□□□□ 0.11
HOMER3-205ENST00000542541 HIST1H2BDP58876 126 aa15.74■□□□□ 0.11
HOMER3-205ENST00000542541 HIST1H2BCP62807 126 aa15.74■□□□□ 0.11
HOMER3-205ENST00000542541 HIST2H2BEQ16778 126 aa15.74■□□□□ 0.11
HOMER3-205ENST00000542541 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.74■□□□□ 0.11
HOMER3-205ENST00000542541 AMMECR1LQ6DCA0 310 aa15.74■□□□□ 0.11
HOMER3-205ENST00000542541 HIST1H2BHQ93079 126 aa15.74■□□□□ 0.11
HOMER3-205ENST00000542541 HIST1H2BNQ99877 126 aa15.74■□□□□ 0.11
HOMER3-205ENST00000542541 HIST1H2BMQ99879 126 aa15.74■□□□□ 0.11
HOMER3-205ENST00000542541 SACSQ9NZJ4 4579 aa15.74■□□□□ 0.11
HOMER3-205ENST00000542541 RNASEKQ6P5S7 137 aaKnown RBP15.73■□□□□ 0.11
HOMER3-205ENST00000542541 LCE6AA0A183 80 aa15.72■□□□□ 0.11
HOMER3-205ENST00000542541 A0A1B0GUV1 79 aa15.72■□□□□ 0.11
HOMER3-205ENST00000542541 CHCHD1Q96BP2 118 aaKnown RBP15.72■□□□□ 0.11
HOMER3-205ENST00000542541 IGHV3-30P01768 117 aa15.72■□□□□ 0.11
HOMER3-205ENST00000542541 IGHV3-33P01772 117 aa15.72■□□□□ 0.11
HOMER3-205ENST00000542541 IGHV3-30-3P0DP02 117 aa15.72■□□□□ 0.11
HOMER3-205ENST00000542541 IGHV3-30-5P0DP03 117 aa15.72■□□□□ 0.11
HOMER3-205ENST00000542541 FGF6P10767 208 aa15.72■□□□□ 0.11
HOMER3-205ENST00000542541 VPS13DQ5THJ4 4388 aa15.72■□□□□ 0.11
HOMER3-205ENST00000542541 ZNF25P17030 456 aaPredicted RBP15.71■□□□□ 0.11
HOMER3-205ENST00000542541 MPV17L2Q567V2 206 aa15.71■□□□□ 0.11
HOMER3-205ENST00000542541 C10orf126Q8N4M7 172 aa15.71■□□□□ 0.11
HOMER3-205ENST00000542541 URB1-AS1Q96HZ7 61 aa15.71■□□□□ 0.11
HOMER3-205ENST00000542541 CYSLTR1Q9Y271 337 aa15.71■□□□□ 0.11
HOMER3-205ENST00000542541 LINC01549A6NIU2 74 aa15.7■□□□□ 0.1
HOMER3-205ENST00000542541 BTF3P20290 206 aaKnown RBP15.7■□□□□ 0.1
HOMER3-205ENST00000542541 RBX1P62877 108 aa15.7■□□□□ 0.1
HOMER3-205ENST00000542541 TTC32Q5I0X7 151 aa15.7■□□□□ 0.1
HOMER3-205ENST00000542541 MRPL52Q86TS9 123 aaKnown RBP15.7■□□□□ 0.1
HOMER3-205ENST00000542541 TMEM101Q96IK0 257 aa15.7■□□□□ 0.1
HOMER3-205ENST00000542541 DGAT2L7PQ6IED9 249 aa15.69■□□□□ 0.1
HOMER3-205ENST00000542541 C2orf66Q6UXQ4 117 aa15.69■□□□□ 0.1
HOMER3-205ENST00000542541 TIMM21Q9BVV7 248 aa15.69■□□□□ 0.1
HOMER3-205ENST00000542541 RPL39P62891 51 aaKnown RBP15.68■□□□□ 0.1
HOMER3-205ENST00000542541 Q8N976 141 aa15.68■□□□□ 0.1
HOMER3-205ENST00000542541 NBDYA0A0U1RRE5 68 aa15.68■□□□□ 0.1
HOMER3-205ENST00000542541 SPANXA1Q9NS26 97 aa15.68■□□□□ 0.1
HOMER3-205ENST00000542541 UBE2D4Q9Y2X8 147 aa15.68■□□□□ 0.1
HOMER3-205ENST00000542541 CSDC2Q9Y534 153 aaKnown RBP15.68■□□□□ 0.1
HOMER3-205ENST00000542541 HSBP1O75506 76 aa15.67■□□□□ 0.1
HOMER3-205ENST00000542541 Q8N3U1 123 aa15.67■□□□□ 0.1
HOMER3-205ENST00000542541 OR5A1Q8NGJ0 315 aa15.67■□□□□ 0.1
HOMER3-205ENST00000542541 ANGP03950 147 aaKnown RBP15.66■□□□□ 0.1
HOMER3-205ENST00000542541 SERF1AO75920 110 aa15.65■□□□□ 0.1
HOMER3-205ENST00000542541 TOMM6Q96B49 74 aa15.65■□□□□ 0.1
HOMER3-205ENST00000542541 KLK12Q9UKR0 248 aa15.65■□□□□ 0.1
HOMER3-205ENST00000542541 PYGO1Q9Y3Y4 419 aa15.65■□□□□ 0.1
HOMER3-205ENST00000542541 IGLV4-60A0A075B6I1 120 aa15.64■□□□□ 0.09
HOMER3-205ENST00000542541 HBDP02042 147 aa15.64■□□□□ 0.09
HOMER3-205ENST00000542541 IBA57-AS1B1ANH7 110 aa15.62■□□□□ 0.09
HOMER3-205ENST00000542541 HYDINQ4G0P3 5121 aa15.62■□□□□ 0.09
HOMER3-205ENST00000542541 NPSP0C0P6 89 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms