RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 A0A0J9YY99 117 aa4.68□□□□□ -1.66
CLTCL1-206ENST00000540896 TRBV10-1A0A0K0K1A3 114 aa4.68□□□□□ -1.66
CLTCL1-206ENST00000540896 TRBV6-5A0A0K0K1A5 114 aa4.68□□□□□ -1.66
CLTCL1-206ENST00000540896 GAGE12JA6NER3 117 aa4.68□□□□□ -1.66
CLTCL1-206ENST00000540896 SDHAF1A6NFY7 115 aa4.68□□□□□ -1.66
CLTCL1-206ENST00000540896 HSBP1O75506 76 aa4.68□□□□□ -1.66
CLTCL1-206ENST00000540896 LINC00614P0C842 121 aa4.68□□□□□ -1.66
CLTCL1-206ENST00000540896 FCER1GP30273 86 aa4.68□□□□□ -1.66
CLTCL1-206ENST00000540896 GAGE1Q13065 139 aa4.68□□□□□ -1.66
CLTCL1-206ENST00000540896 GAGE4Q13068 117 aa4.68□□□□□ -1.66
CLTCL1-206ENST00000540896 GAGE5Q13069 117 aa4.68□□□□□ -1.66
CLTCL1-206ENST00000540896 GAGE13Q4V321 117 aa4.68□□□□□ -1.66
CLTCL1-206ENST00000540896 NEXN-AS1Q8NBZ9 246 aa4.68□□□□□ -1.66
CLTCL1-206ENST00000540896 ZNRF2Q8NHG8 242 aa4.68□□□□□ -1.66
CLTCL1-206ENST00000540896 SMIM2Q9BVW6 85 aa4.68□□□□□ -1.66
CLTCL1-206ENST00000540896 NXT2Q9NPJ8 142 aaKnown RBP4.68□□□□□ -1.66
CLTCL1-206ENST00000540896 PRO0255Q9UI72 69 aa4.68□□□□□ -1.66
CLTCL1-206ENST00000540896 HUWE1Q7Z6Z7 4374 aaKnown RBP4.68□□□□□ -1.66
CLTCL1-206ENST00000540896 TRBV7-3A0A075B6L6 115 aa4.67□□□□□ -1.66
CLTCL1-206ENST00000540896 TRAV26-1A0A087WT03 109 aa4.67□□□□□ -1.66
CLTCL1-206ENST00000540896 I3L3M4 83 aa4.67□□□□□ -1.66
CLTCL1-206ENST00000540896 SERF1AO75920 110 aa4.67□□□□□ -1.66
CLTCL1-206ENST00000540896 GYPEP15421 78 aa4.67□□□□□ -1.66
CLTCL1-206ENST00000540896 CRYBA4P53673 196 aa4.67□□□□□ -1.66
CLTCL1-206ENST00000540896 PDZD11Q5EBL8 140 aa4.67□□□□□ -1.66
CLTCL1-206ENST00000540896 Q6ZTC4 211 aa4.67□□□□□ -1.66
CLTCL1-206ENST00000540896 NEGR1Q7Z3B1 354 aa4.67□□□□□ -1.66
CLTCL1-206ENST00000540896 Q8N8P6 123 aa4.67□□□□□ -1.66
CLTCL1-206ENST00000540896 DEFB104AQ8WTQ1 72 aa4.67□□□□□ -1.66
CLTCL1-206ENST00000540896 PHLDA1Q8WV24 401 aaPredicted RBP4.67□□□□□ -1.66
CLTCL1-206ENST00000540896 CHCHD1Q96BP2 118 aaKnown RBP4.67□□□□□ -1.66
CLTCL1-206ENST00000540896 KIR2DL4Q99706 377 aa4.67□□□□□ -1.66
CLTCL1-206ENST00000540896 TMEM70Q9BUB7 260 aa4.67□□□□□ -1.66
CLTCL1-206ENST00000540896 EDA2RQ9HAV5 297 aa4.67□□□□□ -1.66
CLTCL1-206ENST00000540896 Q9UF83 564 aa4.67□□□□□ -1.66
CLTCL1-206ENST00000540896 DEFB131BA0A096LNP1 70 aa4.66□□□□□ -1.66
CLTCL1-206ENST00000540896 IGHV3-38A0A0C4DH36 116 aa4.66□□□□□ -1.66
CLTCL1-206ENST00000540896 LOC100131303A0A0U1RQF7 123 aa4.66□□□□□ -1.66
CLTCL1-206ENST00000540896 PRSS47A8MTI9 375 aa4.66□□□□□ -1.66
CLTCL1-206ENST00000540896 TCAPO15273 167 aa4.66□□□□□ -1.66
CLTCL1-206ENST00000540896 NUPR1O60356 82 aa4.66□□□□□ -1.66
CLTCL1-206ENST00000540896 NUDT3O95989 172 aa4.66□□□□□ -1.66
CLTCL1-206ENST00000540896 POLR2KP53803 58 aaKnown RBP4.66□□□□□ -1.66
CLTCL1-206ENST00000540896 COTL1Q14019 142 aa4.66□□□□□ -1.66
CLTCL1-206ENST00000540896 LAGE3Q14657 143 aa4.66□□□□□ -1.66
CLTCL1-206ENST00000540896 ORMDL2Q53FV1 153 aa4.66□□□□□ -1.66
CLTCL1-206ENST00000540896 COA6Q5JTJ3 125 aaKnown RBP4.66□□□□□ -1.66
CLTCL1-206ENST00000540896 TRAV10A0A0B4J240 114 aa4.65□□□□□ -1.67
CLTCL1-206ENST00000540896 TRBV27A0A0K0K1C4 114 aa4.65□□□□□ -1.67
CLTCL1-206ENST00000540896 C5orf52A6NGY3 159 aa4.65□□□□□ -1.67
CLTCL1-206ENST00000540896 BTF3P20290 206 aaKnown RBP4.65□□□□□ -1.67
CLTCL1-206ENST00000540896 G0S2P27469 103 aa4.65□□□□□ -1.67
CLTCL1-206ENST00000540896 AMTP48728 403 aa4.65□□□□□ -1.67
CLTCL1-206ENST00000540896 RPL32P62910 135 aaKnown RBP4.65□□□□□ -1.67
CLTCL1-206ENST00000540896 PMCHL1Q16048 86 aa4.65□□□□□ -1.67
CLTCL1-206ENST00000540896 MRPL23Q16540 153 aaKnown RBP4.65□□□□□ -1.67
CLTCL1-206ENST00000540896 DAZ4Q86SG3 579 aaKnown RBP4.65□□□□□ -1.67
CLTCL1-206ENST00000540896 FAM19A2Q8N3H0 131 aa4.65□□□□□ -1.67
CLTCL1-206ENST00000540896 TMEM18Q96B42 140 aa4.65□□□□□ -1.67
CLTCL1-206ENST00000540896 DAZ3Q9NR90 486 aaKnown RBP4.65□□□□□ -1.67
CLTCL1-206ENST00000540896 ICOSQ9Y6W8 199 aa4.65□□□□□ -1.67
CLTCL1-206ENST00000540896 IGLV2-18A0A075B6J9 118 aa4.64□□□□□ -1.67
CLTCL1-206ENST00000540896 A0A096LPF7 62 aa4.64□□□□□ -1.67
CLTCL1-206ENST00000540896 K7EMI3 77 aa4.64□□□□□ -1.67
CLTCL1-206ENST00000540896 TSHBP01222 138 aa4.64□□□□□ -1.67
CLTCL1-206ENST00000540896 FABP4P15090 132 aa4.64□□□□□ -1.67
CLTCL1-206ENST00000540896 UBE2D3P61077 147 aa4.64□□□□□ -1.67
CLTCL1-206ENST00000540896 UBE2D2P62837 147 aa4.64□□□□□ -1.67
CLTCL1-206ENST00000540896 RNF151Q2KHN1 245 aa4.64□□□□□ -1.67
CLTCL1-206ENST00000540896 HIST3H2BBQ8N257 126 aa4.64□□□□□ -1.67
CLTCL1-206ENST00000540896 ATP6V0E2Q8NHE4 81 aa4.64□□□□□ -1.67
CLTCL1-206ENST00000540896 URB1-AS1Q96HZ7 61 aa4.64□□□□□ -1.67
CLTCL1-206ENST00000540896 VSIG2Q96IQ7 327 aa4.64□□□□□ -1.67
CLTCL1-206ENST00000540896 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
CLTCL1-206ENST00000540896 IGLL5B9A064 214 aa4.63□□□□□ -1.67
CLTCL1-206ENST00000540896 UBE2L6O14933 153 aa4.63□□□□□ -1.67
CLTCL1-206ENST00000540896 HBDP02042 147 aa4.63□□□□□ -1.67
CLTCL1-206ENST00000540896 ESDP10768 282 aa4.63□□□□□ -1.67
CLTCL1-206ENST00000540896 TMEM97Q5BJF2 176 aa4.63□□□□□ -1.67
CLTCL1-206ENST00000540896 SH2D6Q7Z4S9 175 aa4.63□□□□□ -1.67
CLTCL1-206ENST00000540896 CYSLTR1Q9Y271 337 aa4.63□□□□□ -1.67
CLTCL1-206ENST00000540896 DNAH7Q8WXX0 4024 aa4.62□□□□□ -1.67
CLTCL1-206ENST00000540896 TRBV25-1A0A075B6N4 114 aa4.62□□□□□ -1.67
CLTCL1-206ENST00000540896 IGHV1-24A0A0C4DH33 117 aa4.62□□□□□ -1.67
CLTCL1-206ENST00000540896 LINC01546A6NGU7 62 aa4.62□□□□□ -1.67
CLTCL1-206ENST00000540896 H3BNG1 76 aa4.62□□□□□ -1.67
CLTCL1-206ENST00000540896 LEPROTL1O95214 131 aa4.62□□□□□ -1.67
CLTCL1-206ENST00000540896 AKR1D1P51857 326 aa4.62□□□□□ -1.67
CLTCL1-206ENST00000540896 C2orf66Q6UXQ4 117 aa4.62□□□□□ -1.67
CLTCL1-206ENST00000540896 SCGB3A1Q96QR1 104 aa4.62□□□□□ -1.67
CLTCL1-206ENST00000540896 HIST1H2BLQ99880 126 aa4.62□□□□□ -1.67
CLTCL1-206ENST00000540896 CHCHD5Q9BSY4 110 aa4.62□□□□□ -1.67
CLTCL1-206ENST00000540896 GTSF1LQ9H1H1 148 aa4.62□□□□□ -1.67
CLTCL1-206ENST00000540896 HSPB8Q9UJY1 196 aa4.62□□□□□ -1.67
CLTCL1-206ENST00000540896 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.61□□□□□ -1.67
CLTCL1-206ENST00000540896 TRBV6-8A0A0A6YYG3 113 aa4.61□□□□□ -1.67
CLTCL1-206ENST00000540896 IGKV2-29A2NJV5 120 aaPredicted RBP4.61□□□□□ -1.67
CLTCL1-206ENST00000540896 LINC01549A6NIU2 74 aa4.61□□□□□ -1.67
CLTCL1-206ENST00000540896 TMEM262E9PQX1 116 aa4.61□□□□□ -1.67
CLTCL1-206ENST00000540896 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms