RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 MRPL52Q86TS9 123 aaKnown RBP8.87□□□□□ -0.99
SMAD3-204ENST00000540846 Q8NAQ8 132 aa8.87□□□□□ -0.99
SMAD3-204ENST00000540846 ZNF479Q96JC4 524 aa8.87□□□□□ -0.99
SMAD3-204ENST00000540846 TIMM17AQ99595 171 aa8.87□□□□□ -0.99
SMAD3-204ENST00000540846 RPL39P62891 51 aaKnown RBP8.86□□□□□ -0.99
SMAD3-204ENST00000540846 LBHQ53QV2 105 aaPredicted RBP8.86□□□□□ -0.99
SMAD3-204ENST00000540846 OR11H2Q8NH07 326 aa8.86□□□□□ -0.99
SMAD3-204ENST00000540846 BAALCQ8WXS3 180 aa8.86□□□□□ -0.99
SMAD3-204ENST00000540846 TMEM141Q96I45 108 aa8.86□□□□□ -0.99
SMAD3-204ENST00000540846 B9D2Q9BPU9 175 aa8.86□□□□□ -0.99
SMAD3-204ENST00000540846 Q9UF83 564 aa8.86□□□□□ -0.99
SMAD3-204ENST00000540846 TRBV10-1A0A0K0K1A3 114 aa8.86□□□□□ -0.99
SMAD3-204ENST00000540846 SMIM9A6NGZ8 99 aa8.86□□□□□ -0.99
SMAD3-204ENST00000540846 CIDEAO60543 219 aa8.86□□□□□ -0.99
SMAD3-204ENST00000540846 IGKCP01834 107 aa8.86□□□□□ -0.99
SMAD3-204ENST00000540846 ANKRD39Q53RE8 183 aa8.86□□□□□ -0.99
SMAD3-204ENST00000540846 C20orf203Q8NBC4 194 aa8.86□□□□□ -0.99
SMAD3-204ENST00000540846 MRPL35Q9NZE8 188 aaKnown RBP8.86□□□□□ -0.99
SMAD3-204ENST00000540846 F8VRH5 84 aa8.85□□□□□ -0.99
SMAD3-204ENST00000540846 K7EQD1 137 aa8.85□□□□□ -0.99
SMAD3-204ENST00000540846 PLNP26678 52 aa8.85□□□□□ -0.99
SMAD3-204ENST00000540846 LINC00612Q8N6U2 182 aa8.85□□□□□ -0.99
SMAD3-204ENST00000540846 DEFB104AQ8WTQ1 72 aa8.85□□□□□ -0.99
SMAD3-204ENST00000540846 HHLA3Q9XRX5 114 aa8.85□□□□□ -0.99
SMAD3-204ENST00000540846 DNAH9Q9NYC9 4486 aa8.85□□□□□ -0.99
SMAD3-204ENST00000540846 STAB2Q8WWQ8 2551 aa8.84□□□□□ -0.99
SMAD3-204ENST00000540846 IGHV4-28A0A0C4DH34 117 aa8.84□□□□□ -0.99
SMAD3-204ENST00000540846 GAGE12BA1L429 117 aa8.84□□□□□ -0.99
SMAD3-204ENST00000540846 GAGE7O76087 117 aa8.84□□□□□ -0.99
SMAD3-204ENST00000540846 GAGE12FP0CL80 117 aa8.84□□□□□ -0.99
SMAD3-204ENST00000540846 GAGE12GP0CL81 117 aa8.84□□□□□ -0.99
SMAD3-204ENST00000540846 GAGE12IP0CL82 117 aa8.84□□□□□ -0.99
SMAD3-204ENST00000540846 MIFP14174 115 aa8.84□□□□□ -0.99
SMAD3-204ENST00000540846 HNRNPA3P51991 378 aaKnown RBP8.84□□□□□ -0.99
SMAD3-204ENST00000540846 SLC25A34Q6PIV7 304 aa8.84□□□□□ -0.99
SMAD3-204ENST00000540846 TRGV2A0A075B6R0 118 aa8.83□□□□□ -1
SMAD3-204ENST00000540846 COX8AP10176 69 aa8.83□□□□□ -1
SMAD3-204ENST00000540846 STPG4Q8N801 248 aa8.83□□□□□ -1
SMAD3-204ENST00000540846 SPATA25Q9BR10 227 aa8.83□□□□□ -1
SMAD3-204ENST00000540846 MRPS16Q9Y3D3 137 aaKnown RBP8.83□□□□□ -1
SMAD3-204ENST00000540846 CHTOPQ9Y3Y2 248 aaKnown RBP8.83□□□□□ -1
SMAD3-204ENST00000540846 HUWE1Q7Z6Z7 4374 aaKnown RBP8.83□□□□□ -1
SMAD3-204ENST00000540846 TRBV7-3A0A075B6L6 115 aa8.82□□□□□ -1
SMAD3-204ENST00000540846 PRSS29PA6NIE9 313 aa8.82□□□□□ -1
SMAD3-204ENST00000540846 EREGO14944 169 aa8.82□□□□□ -1
SMAD3-204ENST00000540846 M0R143 59 aa8.82□□□□□ -1
SMAD3-204ENST00000540846 FGF6P10767 208 aa8.82□□□□□ -1
SMAD3-204ENST00000540846 RPL36AP83881 106 aaKnown RBP8.82□□□□□ -1
SMAD3-204ENST00000540846 PMVKQ15126 192 aa8.82□□□□□ -1
SMAD3-204ENST00000540846 SLC25A29Q8N8R3 303 aa8.82□□□□□ -1
SMAD3-204ENST00000540846 RPL36ALQ969Q0 106 aaKnown RBP8.82□□□□□ -1
SMAD3-204ENST00000540846 CHCHD7Q9BUK0 85 aa8.82□□□□□ -1
SMAD3-204ENST00000540846 SNHG12Q9BXW3 62 aa8.82□□□□□ -1
SMAD3-204ENST00000540846 PYGO1Q9Y3Y4 419 aa8.82□□□□□ -1
SMAD3-204ENST00000540846 TRBV6-4A0A1B0GX49 114 aa8.81□□□□□ -1
SMAD3-204ENST00000540846 DEFB4AO15263 64 aa8.81□□□□□ -1
SMAD3-204ENST00000540846 COTL1Q14019 142 aa8.81□□□□□ -1
SMAD3-204ENST00000540846 ZNRF2Q8NHG8 242 aa8.81□□□□□ -1
SMAD3-204ENST00000540846 C11orf68Q9H3H3 251 aaKnown RBP8.81□□□□□ -1
SMAD3-204ENST00000540846 TP73-AS1Q9UF72 201 aa8.81□□□□□ -1
SMAD3-204ENST00000540846 DLEU1O43261 78 aa8.8□□□□□ -1
SMAD3-204ENST00000540846 NPSP0C0P6 89 aa8.8□□□□□ -1
SMAD3-204ENST00000540846 EMP1P54849 157 aa8.8□□□□□ -1
SMAD3-204ENST00000540846 UBE2D3P61077 147 aa8.8□□□□□ -1
SMAD3-204ENST00000540846 UBE2D2P62837 147 aa8.8□□□□□ -1
SMAD3-204ENST00000540846 ZC2HC1BQ5TFG8 222 aa8.8□□□□□ -1
SMAD3-204ENST00000540846 CST9LQ9H4G1 147 aa8.8□□□□□ -1
SMAD3-204ENST00000540846 IGLV4-69A0A075B6H9 119 aa8.79□□□□□ -1
SMAD3-204ENST00000540846 IGLV4-3A0A075B6K6 122 aa8.79□□□□□ -1
SMAD3-204ENST00000540846 IGHV3-38A0A0C4DH36 116 aa8.79□□□□□ -1
SMAD3-204ENST00000540846 LYRM9A8MSI8 78 aa8.79□□□□□ -1
SMAD3-204ENST00000540846 DAZ4Q86SG3 579 aaKnown RBP8.79□□□□□ -1
SMAD3-204ENST00000540846 BOD1L2Q8IYS8 172 aa8.79□□□□□ -1
SMAD3-204ENST00000540846 PHLDA1Q8WV24 401 aaPredicted RBP8.79□□□□□ -1
SMAD3-204ENST00000540846 C2orf88Q9BSF0 95 aa8.79□□□□□ -1
SMAD3-204ENST00000540846 DAZ3Q9NR90 486 aaKnown RBP8.79□□□□□ -1
SMAD3-204ENST00000540846 CELA1Q9UNI1 258 aa8.79□□□□□ -1
SMAD3-204ENST00000540846 TRGV4A0A0C4DH28 118 aa8.78□□□□□ -1
SMAD3-204ENST00000540846 CRYBA4P53673 196 aa8.78□□□□□ -1
SMAD3-204ENST00000540846 FHL2Q14192 279 aa8.78□□□□□ -1
SMAD3-204ENST00000540846 PAPPA-AS1Q5QFB9 102 aa8.78□□□□□ -1
SMAD3-204ENST00000540846 SPANXA1Q9NS26 97 aa8.78□□□□□ -1
SMAD3-204ENST00000540846 IGKV2D-26A0A0A0MRZ7 120 aa8.78□□□□□ -1
SMAD3-204ENST00000540846 NMUP48645 174 aa8.78□□□□□ -1
SMAD3-204ENST00000540846 FAM222AQ5U5X8 452 aa8.78□□□□□ -1
SMAD3-204ENST00000540846 C2orf91Q6ZV80 131 aa8.78□□□□□ -1
SMAD3-204ENST00000540846 LINC00469Q8N7U9 141 aa8.78□□□□□ -1
SMAD3-204ENST00000540846 FAM104AQ969W3 186 aa8.78□□□□□ -1
SMAD3-204ENST00000540846 OPRPNQ99935 248 aaPredicted RBP8.78□□□□□ -1
SMAD3-204ENST00000540846 A0A0J9YWU9 116 aa8.77□□□□□ -1.01
SMAD3-204ENST00000540846 GAGE12JA6NER3 117 aa8.77□□□□□ -1.01
SMAD3-204ENST00000540846 LINC00694P0DN24 101 aa8.77□□□□□ -1.01
SMAD3-204ENST00000540846 DEFB130BP0DP73 79 aa8.77□□□□□ -1.01
SMAD3-204ENST00000540846 DEFB130AP0DP74 79 aa8.77□□□□□ -1.01
SMAD3-204ENST00000540846 TCTAP57738 103 aa8.77□□□□□ -1.01
SMAD3-204ENST00000540846 GAGE1Q13065 139 aa8.77□□□□□ -1.01
SMAD3-204ENST00000540846 GAGE4Q13068 117 aa8.77□□□□□ -1.01
SMAD3-204ENST00000540846 GAGE5Q13069 117 aa8.77□□□□□ -1.01
SMAD3-204ENST00000540846 GAGE13Q4V321 117 aa8.77□□□□□ -1.01
SMAD3-204ENST00000540846 UBE2D4Q9Y2X8 147 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms