RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 XCL2Q9UBD3 114 aa8.39□□□□□ -1.07
C11orf54-214ENST00000540113 TRAV2A0A0B4J234 112 aa8.38□□□□□ -1.07
C11orf54-214ENST00000540113 G3V4G9 280 aa8.38□□□□□ -1.07
C11orf54-214ENST00000540113 J3QQQ9 107 aa8.38□□□□□ -1.07
C11orf54-214ENST00000540113 AZU1P20160 251 aa8.38□□□□□ -1.07
C11orf54-214ENST00000540113 PAPPA-AS1Q5QFB9 102 aa8.38□□□□□ -1.07
C11orf54-214ENST00000540113 RAX2Q96IS3 184 aa8.38□□□□□ -1.07
C11orf54-214ENST00000540113 A0A1B0GWB2 263 aa8.38□□□□□ -1.07
C11orf54-214ENST00000540113 ADARB2-AS1A8MUL3 147 aa8.38□□□□□ -1.07
C11orf54-214ENST00000540113 SH2D6Q7Z4S9 175 aa8.38□□□□□ -1.07
C11orf54-214ENST00000540113 FAM104AQ969W3 186 aa8.38□□□□□ -1.07
C11orf54-214ENST00000540113 AMELXQ99217 191 aa8.38□□□□□ -1.07
C11orf54-214ENST00000540113 ACANP16112 2415 aa8.37□□□□□ -1.07
C11orf54-214ENST00000540113 ZNF22P17026 224 aaPredicted RBP8.37□□□□□ -1.07
C11orf54-214ENST00000540113 VCX2Q9H322 139 aa8.37□□□□□ -1.07
C11orf54-214ENST00000540113 TNFRSF18Q9Y5U5 241 aa8.37□□□□□ -1.07
C11orf54-214ENST00000540113 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.37□□□□□ -1.07
C11orf54-214ENST00000540113 IGKV2-29A2NJV5 120 aaPredicted RBP8.37□□□□□ -1.07
C11orf54-214ENST00000540113 M0R2P5 195 aa8.37□□□□□ -1.07
C11orf54-214ENST00000540113 LGALS3P17931 250 aaKnown RBP8.37□□□□□ -1.07
C11orf54-214ENST00000540113 CFAP126Q5VTH2 177 aa8.37□□□□□ -1.07
C11orf54-214ENST00000540113 SPXQ9BT56 116 aa8.37□□□□□ -1.07
C11orf54-214ENST00000540113 NOTCH3Q9UM47 2321 aa8.36□□□□□ -1.07
C11orf54-214ENST00000540113 LOC107984156A0A0G2JMH3 177 aa8.36□□□□□ -1.07
C11orf54-214ENST00000540113 TMEM223A0PJW6 202 aa8.36□□□□□ -1.07
C11orf54-214ENST00000540113 ARL17AQ8IVW1 177 aa8.36□□□□□ -1.07
C11orf54-214ENST00000540113 RHODO00212 210 aa8.35□□□□□ -1.07
C11orf54-214ENST00000540113 TSPAN13O95857 204 aa8.35□□□□□ -1.07
C11orf54-214ENST00000540113 ZNF415Q09FC8 603 aa8.35□□□□□ -1.07
C11orf54-214ENST00000540113 NFE4Q86UQ8 179 aa8.35□□□□□ -1.07
C11orf54-214ENST00000540113 C11orf72Q8NBR9 251 aa8.35□□□□□ -1.07
C11orf54-214ENST00000540113 TRAV8-3A0A0A6YYJ7 113 aa8.35□□□□□ -1.07
C11orf54-214ENST00000540113 A8MZ25 164 aa8.35□□□□□ -1.07
C11orf54-214ENST00000540113 IGHV3-30P01768 117 aa8.35□□□□□ -1.07
C11orf54-214ENST00000540113 IGHV3-30-5P0DP03 117 aa8.35□□□□□ -1.07
C11orf54-214ENST00000540113 UBE2D1P51668 147 aa8.35□□□□□ -1.07
C11orf54-214ENST00000540113 FHL3Q13643 280 aa8.35□□□□□ -1.07
C11orf54-214ENST00000540113 ODF3L2Q3SX64 289 aa8.35□□□□□ -1.07
C11orf54-214ENST00000540113 ETDBQ3ZM63 59 aa8.35□□□□□ -1.07
C11orf54-214ENST00000540113 SETXQ7Z333 2677 aaKnown RBP8.35□□□□□ -1.07
C11orf54-214ENST00000540113 ITPR2Q14571 2701 aa8.34□□□□□ -1.07
C11orf54-214ENST00000540113 JMJD1CQ15652 2540 aa8.34□□□□□ -1.07
C11orf54-214ENST00000540113 ANK3Q12955 4377 aaKnown RBP8.34□□□□□ -1.07
C11orf54-214ENST00000540113 A8MWV9 139 aa8.34□□□□□ -1.07
C11orf54-214ENST00000540113 SLC25A29Q8N8R3 303 aa8.34□□□□□ -1.07
C11orf54-214ENST00000540113 YAE1D1Q9NRH1 226 aa8.34□□□□□ -1.07
C11orf54-214ENST00000540113 LEPROTO15243 131 aa8.33□□□□□ -1.08
C11orf54-214ENST00000540113 CFC1BP0CG36 223 aa8.33□□□□□ -1.08
C11orf54-214ENST00000540113 CFC1P0CG37 223 aa8.33□□□□□ -1.08
C11orf54-214ENST00000540113 PSMB2P49721 201 aa8.33□□□□□ -1.08
C11orf54-214ENST00000540113 NDUFA11Q86Y39 141 aa8.33□□□□□ -1.08
C11orf54-214ENST00000540113 CHCHD7Q9BUK0 85 aa8.33□□□□□ -1.08
C11orf54-214ENST00000540113 INSP01308 110 aa8.33□□□□□ -1.08
C11orf54-214ENST00000540113 IGHV3-53P01767 116 aa8.33□□□□□ -1.08
C11orf54-214ENST00000540113 GAGE13Q4V321 117 aa8.33□□□□□ -1.08
C11orf54-214ENST00000540113 LINC00467Q9BRT7 94 aa8.33□□□□□ -1.08
C11orf54-214ENST00000540113 SPANXB1Q9NS25 103 aaPredicted RBP8.33□□□□□ -1.08
C11orf54-214ENST00000540113 MTORP42345 2549 aa8.33□□□□□ -1.08
C11orf54-214ENST00000540113 INSL3P51460 131 aa8.32□□□□□ -1.08
C11orf54-214ENST00000540113 CITED2Q99967 270 aaPredicted RBP8.32□□□□□ -1.08
C11orf54-214ENST00000540113 WFDC10AQ9H1F0 79 aa8.32□□□□□ -1.08
C11orf54-214ENST00000540113 PRO0461Q9UI25 63 aa8.32□□□□□ -1.08
C11orf54-214ENST00000540113 HELZ2Q9BYK8 2649 aaKnown RBP8.32□□□□□ -1.08
C11orf54-214ENST00000540113 F8W1H4 67 aa8.32□□□□□ -1.08
C11orf54-214ENST00000540113 H7C2G1 150 aa8.32□□□□□ -1.08
C11orf54-214ENST00000540113 CCL24O00175 119 aa8.32□□□□□ -1.08
C11orf54-214ENST00000540113 EIF4EBP3O60516 100 aaPredicted RBP8.32□□□□□ -1.08
C11orf54-214ENST00000540113 STHQ8IWL8 128 aa8.32□□□□□ -1.08
C11orf54-214ENST00000540113 C1orf158Q8N1D5 194 aa8.32□□□□□ -1.08
C11orf54-214ENST00000540113 C10orf126Q8N4M7 172 aa8.32□□□□□ -1.08
C11orf54-214ENST00000540113 IGHV3-30-3P0DP02 117 aa8.31□□□□□ -1.08
C11orf54-214ENST00000540113 Q6ZUT4 128 aa8.31□□□□□ -1.08
C11orf54-214ENST00000540113 LINC01006Q8NI28 216 aa8.31□□□□□ -1.08
C11orf54-214ENST00000540113 ZNF418Q8TF45 676 aaPredicted RBP8.31□□□□□ -1.08
C11orf54-214ENST00000540113 TRGV1A0A0A0MS02 117 aa8.31□□□□□ -1.08
C11orf54-214ENST00000540113 A4D1N5 150 aa8.31□□□□□ -1.08
C11orf54-214ENST00000540113 SPINK8P0C7L1 97 aa8.31□□□□□ -1.08
C11orf54-214ENST00000540113 MUSTN1Q8IVN3 82 aa8.31□□□□□ -1.08
C11orf54-214ENST00000540113 UBE2D4Q9Y2X8 147 aa8.31□□□□□ -1.08
C11orf54-214ENST00000540113 UNC79Q9P2D8 2635 aa8.3□□□□□ -1.08
C11orf54-214ENST00000540113 RNASE1P07998 156 aaKnown RBP8.3□□□□□ -1.08
C11orf54-214ENST00000540113 NPC2P61916 151 aa8.3□□□□□ -1.08
C11orf54-214ENST00000540113 COTL1Q14019 142 aa8.3□□□□□ -1.08
C11orf54-214ENST00000540113 EDA2RQ9HAV5 297 aa8.3□□□□□ -1.08
C11orf54-214ENST00000540113 SMCPP49901 116 aaPredicted RBP8.3□□□□□ -1.08
C11orf54-214ENST00000540113 TIMM21Q9BVV7 248 aa8.3□□□□□ -1.08
C11orf54-214ENST00000540113 TRAV25A0A0B4J276 109 aa8.29□□□□□ -1.08
C11orf54-214ENST00000540113 PTH2Q96A98 100 aa8.29□□□□□ -1.08
C11orf54-214ENST00000540113 PYGO1Q9Y3Y4 419 aa8.29□□□□□ -1.08
C11orf54-214ENST00000540113 A0A0J9YXY3 114 aa8.29□□□□□ -1.08
C11orf54-214ENST00000540113 RS1O15537 224 aa8.29□□□□□ -1.08
C11orf54-214ENST00000540113 TCL1BO95988 128 aa8.29□□□□□ -1.08
C11orf54-214ENST00000540113 MRPS36P82909 103 aaKnown RBP8.29□□□□□ -1.08
C11orf54-214ENST00000540113 Q6ZTI0 123 aa8.29□□□□□ -1.08
C11orf54-214ENST00000540113 C16orf95Q9H693 158 aa8.29□□□□□ -1.08
C11orf54-214ENST00000540113 NDUFA7O95182 113 aa8.28□□□□□ -1.08
C11orf54-214ENST00000540113 BEAN1Q3B7T3 259 aa8.28□□□□□ -1.08
C11orf54-214ENST00000540113 TSSC4Q9Y5U2 329 aaPredicted RBP8.28□□□□□ -1.08
C11orf54-214ENST00000540113 RPL35AP18077 110 aaKnown RBP8.27□□□□□ -1.09
C11orf54-214ENST00000540113 UBE2D3P61077 147 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms