RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 C8orf49Q96NF6 230 aa4.29□□□□□ -1.72
CPSF7-219ENST00000539952 RHPN1-AS1Q9BWJ2 59 aa4.29□□□□□ -1.72
CPSF7-219ENST00000539952 HHLA3Q9XRX5 114 aa4.29□□□□□ -1.72
CPSF7-219ENST00000539952 TRBV25-1A0A075B6N4 114 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 A0A087WX48 190 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 IGHV3-21A0A0B4J1V1 117 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 IGHV4-28A0A0C4DH34 117 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 IGHV7-4-1A0A0J9YVY3 117 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 A0A1B0GV72 72 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 C16orf90A8MZG2 172 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 E9PLD3 99 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.28□□□□□ -1.72
CPSF7-219ENST00000539952 H7C1H1 209 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 PAX4O43316 350 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 SNAI2O43623 268 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 NPYP01303 97 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 RBMY1A1P0DJD3 496 aaKnown RBP4.28□□□□□ -1.72
CPSF7-219ENST00000539952 RBMY1CP0DJD4 496 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 GCSHP23434 173 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 RPL24P83731 157 aaKnown RBP4.28□□□□□ -1.72
CPSF7-219ENST00000539952 RBMY1FQ15415 496 aaKnown RBP4.28□□□□□ -1.72
CPSF7-219ENST00000539952 SAMD13Q5VXD3 122 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 MORN3Q6PF18 240 aaPredicted RBP4.28□□□□□ -1.72
CPSF7-219ENST00000539952 Q6ZR54 194 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 STHQ8IWL8 128 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 ATP6V0E2Q8NHE4 81 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 RAB37Q96AX2 223 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 C17orf77Q96MU5 243 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 CHAC1Q9BUX1 264 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 HECTD4Q9Y4D8 3996 aa4.28□□□□□ -1.72
CPSF7-219ENST00000539952 DYNC1H1Q14204 4646 aaKnown RBP4.28□□□□□ -1.72
CPSF7-219ENST00000539952 DNAH11Q96DT5 4516 aa4.27□□□□□ -1.73
CPSF7-219ENST00000539952 TRAV2A0A0B4J234 112 aa4.27□□□□□ -1.73
CPSF7-219ENST00000539952 M0R3E3 92 aa4.27□□□□□ -1.73
CPSF7-219ENST00000539952 CTSGP08311 255 aa4.27□□□□□ -1.73
CPSF7-219ENST00000539952 C12orf74Q32Q52 190 aa4.27□□□□□ -1.73
CPSF7-219ENST00000539952 GAGE13Q4V321 117 aa4.27□□□□□ -1.73
CPSF7-219ENST00000539952 TMEM78Q5T7P6 136 aa4.27□□□□□ -1.73
CPSF7-219ENST00000539952 ZC2HC1BQ5TFG8 222 aa4.27□□□□□ -1.73
CPSF7-219ENST00000539952 UBE2DNLQ8IWF7 75 aa4.27□□□□□ -1.73
CPSF7-219ENST00000539952 RNF185Q96GF1 192 aa4.27□□□□□ -1.73
CPSF7-219ENST00000539952 C20orf78Q9BR46 151 aa4.27□□□□□ -1.73
CPSF7-219ENST00000539952 DKK2Q9UBU2 259 aa4.27□□□□□ -1.73
CPSF7-219ENST00000539952 IGLV2-18A0A075B6J9 118 aa4.26□□□□□ -1.73
CPSF7-219ENST00000539952 TMSB15BA0A087X1C1 80 aa4.26□□□□□ -1.73
CPSF7-219ENST00000539952 TRBV7-9A0A0J9YWB2 115 aa4.26□□□□□ -1.73
CPSF7-219ENST00000539952 A0A1B0GWB2 263 aa4.26□□□□□ -1.73
CPSF7-219ENST00000539952 GAGE12HA6NDE8 117 aa4.26□□□□□ -1.73
CPSF7-219ENST00000539952 F8VRH5 84 aa4.26□□□□□ -1.73
CPSF7-219ENST00000539952 M0R381 172 aa4.26□□□□□ -1.73
CPSF7-219ENST00000539952 DEFB131AP59861 70 aa4.26□□□□□ -1.73
CPSF7-219ENST00000539952 C9orf47Q6ZRZ4 202 aa4.26□□□□□ -1.73
CPSF7-219ENST00000539952 PCP2Q8IVA1 136 aa4.26□□□□□ -1.73
CPSF7-219ENST00000539952 ZNF479Q96JC4 524 aa4.26□□□□□ -1.73
CPSF7-219ENST00000539952 LINC00477Q96M19 166 aa4.26□□□□□ -1.73
CPSF7-219ENST00000539952 HIST1H4GQ99525 98 aa4.26□□□□□ -1.73
CPSF7-219ENST00000539952 SPANXA1Q9NS26 97 aa4.26□□□□□ -1.73
CPSF7-219ENST00000539952 DNAH17Q9UFH2 4485 aa4.25□□□□□ -1.73
CPSF7-219ENST00000539952 IGKV3-7A0A075B6H7 116 aa4.25□□□□□ -1.73
CPSF7-219ENST00000539952 TRBV20-1A0A075B6N2 111 aa4.25□□□□□ -1.73
CPSF7-219ENST00000539952 LOC100996750A0A140TA64 210 aa4.25□□□□□ -1.73
CPSF7-219ENST00000539952 BUB3O43684 328 aa4.25□□□□□ -1.73
CPSF7-219ENST00000539952 SPART-AS1P0CW21 52 aa4.25□□□□□ -1.73
CPSF7-219ENST00000539952 RPL32P62910 135 aaKnown RBP4.25□□□□□ -1.73
CPSF7-219ENST00000539952 SPANXN1Q5VSR9 72 aa4.25□□□□□ -1.73
CPSF7-219ENST00000539952 C1QTNF4Q9BXJ3 329 aa4.25□□□□□ -1.73
CPSF7-219ENST00000539952 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
CPSF7-219ENST00000539952 NHP2Q9NX24 153 aaKnown RBP4.25□□□□□ -1.73
CPSF7-219ENST00000539952 CYSLTR1Q9Y271 337 aa4.25□□□□□ -1.73
CPSF7-219ENST00000539952 IGHV3OR16-8A0A075B7F1 116 aa4.24□□□□□ -1.73
CPSF7-219ENST00000539952 IGKV2-40A0A087WW87 121 aaPredicted RBP4.24□□□□□ -1.73
CPSF7-219ENST00000539952 MYMXA0A1B0GTQ4 84 aa4.24□□□□□ -1.73
CPSF7-219ENST00000539952 TMEM262E9PQX1 116 aa4.24□□□□□ -1.73
CPSF7-219ENST00000539952 SMKR1H3BMG3 65 aa4.24□□□□□ -1.73
CPSF7-219ENST00000539952 H3BMG7 143 aa4.24□□□□□ -1.73
CPSF7-219ENST00000539952 IGKV2D-40P01614 121 aaPredicted RBP4.24□□□□□ -1.73
CPSF7-219ENST00000539952 GIG44P09565 113 aaPredicted RBP4.24□□□□□ -1.73
CPSF7-219ENST00000539952 AZU1P20160 251 aa4.24□□□□□ -1.73
CPSF7-219ENST00000539952 ZNF80P51504 273 aaPredicted RBP4.24□□□□□ -1.73
CPSF7-219ENST00000539952 FXYD2P54710 66 aa4.24□□□□□ -1.73
CPSF7-219ENST00000539952 HERVK_113P61574 105 aa4.24□□□□□ -1.73
CPSF7-219ENST00000539952 RRN3P1Q2M238 152 aa4.24□□□□□ -1.73
CPSF7-219ENST00000539952 TRPT1Q86TN4 253 aaKnown RBP4.24□□□□□ -1.73
CPSF7-219ENST00000539952 CSNK1G2-AS1Q8NCQ2 148 aa4.24□□□□□ -1.73
CPSF7-219ENST00000539952 TOMM6Q96B49 74 aa4.24□□□□□ -1.73
CPSF7-219ENST00000539952 C18orf15Q96N68 181 aa4.24□□□□□ -1.73
CPSF7-219ENST00000539952 SCGB3A1Q96QR1 104 aa4.24□□□□□ -1.73
CPSF7-219ENST00000539952 METTL26Q96S19 204 aa4.24□□□□□ -1.73
CPSF7-219ENST00000539952 DPH3P1Q9H4G8 78 aa4.24□□□□□ -1.73
CPSF7-219ENST00000539952 FAT2Q9NYQ8 4349 aa4.24□□□□□ -1.73
CPSF7-219ENST00000539952 DNAH6Q9C0G6 4158 aa4.24□□□□□ -1.73
CPSF7-219ENST00000539952 DNAH2Q9P225 4427 aa4.24□□□□□ -1.73
CPSF7-219ENST00000539952 AGRNO00468 2067 aa4.23□□□□□ -1.73
CPSF7-219ENST00000539952 IGHV3OR16-13A0A075B7E8 117 aa4.23□□□□□ -1.73
CPSF7-219ENST00000539952 IGHV3-49A0A0A0MS15 119 aa4.23□□□□□ -1.73
CPSF7-219ENST00000539952 IGHV3-74A0A0B4J1X5 117 aa4.23□□□□□ -1.73
CPSF7-219ENST00000539952 TRAV21A0A0B4J279 112 aa4.23□□□□□ -1.73
CPSF7-219ENST00000539952 TEX48A0A1B0GUV7 120 aa4.23□□□□□ -1.73
CPSF7-219ENST00000539952 SMIM9A6NGZ8 99 aa4.23□□□□□ -1.73
CPSF7-219ENST00000539952 EPM2AB3EWF7 344 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 239.4 ms