RNA–Protein interactions for RNA: ENST00000539587.5

LRTOMT-217, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-217ENST00000539587 NIT2Q9NQR4 276 aa4.3□□□□□ -1.72
LRTOMT-217ENST00000539587 IGHV1-58A0A0C4DH39 117 aa4.29□□□□□ -1.72
LRTOMT-217ENST00000539587 INMT-MINDY4F8WBC2 141 aa4.29□□□□□ -1.72
LRTOMT-217ENST00000539587 MT-ND6P03923 174 aa4.29□□□□□ -1.72
LRTOMT-217ENST00000539587 IFITM3Q01628 133 aa4.29□□□□□ -1.72
LRTOMT-217ENST00000539587 SYCNQ0VAF6 134 aa4.29□□□□□ -1.72
LRTOMT-217ENST00000539587 C9orf116Q5BN46 136 aaPredicted RBP4.29□□□□□ -1.72
LRTOMT-217ENST00000539587 MZT2BQ6NZ67 158 aa4.29□□□□□ -1.72
LRTOMT-217ENST00000539587 RASL11AQ6T310 242 aa4.29□□□□□ -1.72
LRTOMT-217ENST00000539587 PHF5AQ7RTV0 110 aaKnown RBP4.29□□□□□ -1.72
LRTOMT-217ENST00000539587 CARD19Q96LW7 228 aa4.29□□□□□ -1.72
LRTOMT-217ENST00000539587 PKIGQ9Y2B9 76 aa4.29□□□□□ -1.72
LRTOMT-217ENST00000539587 LOC107984640A0A0U1RRK4 108 aa4.28□□□□□ -1.72
LRTOMT-217ENST00000539587 LINC00959A0A1B0GUT2 108 aa4.28□□□□□ -1.72
LRTOMT-217ENST00000539587 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.28□□□□□ -1.72
LRTOMT-217ENST00000539587 NTF3P20783 257 aa4.28□□□□□ -1.72
LRTOMT-217ENST00000539587 DEFA3P59666 94 aa4.28□□□□□ -1.72
LRTOMT-217ENST00000539587 SSTP61278 116 aa4.28□□□□□ -1.72
LRTOMT-217ENST00000539587 UBE2G1P62253 170 aa4.28□□□□□ -1.72
LRTOMT-217ENST00000539587 MEF2BQ02080 365 aaPredicted RBP4.28□□□□□ -1.72
LRTOMT-217ENST00000539587 KRTAP7-1Q8IUC3 87 aa4.28□□□□□ -1.72
LRTOMT-217ENST00000539587 NUP35Q8NFH5 326 aa4.28□□□□□ -1.72
LRTOMT-217ENST00000539587 AP1S3Q96PC3 154 aa4.28□□□□□ -1.72
LRTOMT-217ENST00000539587 IGKV3OR2-268A0A0C4DH90 116 aa4.27□□□□□ -1.73
LRTOMT-217ENST00000539587 H7C423 109 aa4.27□□□□□ -1.73
LRTOMT-217ENST00000539587 S100A9P06702 114 aaKnown RBP4.27□□□□□ -1.73
LRTOMT-217ENST00000539587 SMIM17P0DL12 118 aa4.27□□□□□ -1.73
LRTOMT-217ENST00000539587 GAGE2BQ13066 116 aa4.27□□□□□ -1.73
LRTOMT-217ENST00000539587 COTL1Q14019 142 aa4.27□□□□□ -1.73
LRTOMT-217ENST00000539587 Q5BKY6 102 aa4.27□□□□□ -1.73
LRTOMT-217ENST00000539587 Q6ZNX1 250 aa4.27□□□□□ -1.73
LRTOMT-217ENST00000539587 LINC00299Q6ZSB3 139 aa4.27□□□□□ -1.73
LRTOMT-217ENST00000539587 OR5A1Q8NGJ0 315 aa4.27□□□□□ -1.73
LRTOMT-217ENST00000539587 CARHSP1Q9Y2V2 147 aaKnown RBP4.27□□□□□ -1.73
LRTOMT-217ENST00000539587 IGLV4-69A0A075B6H9 119 aa4.26□□□□□ -1.73
LRTOMT-217ENST00000539587 UBE2L6O14933 153 aa4.26□□□□□ -1.73
LRTOMT-217ENST00000539587 CCL25O15444 150 aa4.26□□□□□ -1.73
LRTOMT-217ENST00000539587 BCL2P10415 239 aa4.26□□□□□ -1.73
LRTOMT-217ENST00000539587 FGF6P10767 208 aa4.26□□□□□ -1.73
LRTOMT-217ENST00000539587 XCL1P47992 114 aa4.26□□□□□ -1.73
LRTOMT-217ENST00000539587 CAMPP49913 170 aa4.26□□□□□ -1.73
LRTOMT-217ENST00000539587 RNF151Q2KHN1 245 aa4.26□□□□□ -1.73
LRTOMT-217ENST00000539587 RPL7L1Q6DKI1 246 aaKnown RBP4.26□□□□□ -1.73
LRTOMT-217ENST00000539587 CD164L2Q6UWJ8 174 aa4.26□□□□□ -1.73
LRTOMT-217ENST00000539587 BAGE2Q86Y30 109 aa4.26□□□□□ -1.73
LRTOMT-217ENST00000539587 GATD1Q8NB37 220 aa4.26□□□□□ -1.73
LRTOMT-217ENST00000539587 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.25□□□□□ -1.73
LRTOMT-217ENST00000539587 IGKV2-29A2NJV5 120 aaPredicted RBP4.25□□□□□ -1.73
LRTOMT-217ENST00000539587 C19orf71A6NCJ1 209 aa4.25□□□□□ -1.73
LRTOMT-217ENST00000539587 SSNA1O43805 119 aa4.25□□□□□ -1.73
LRTOMT-217ENST00000539587 NCR2O95944 276 aa4.25□□□□□ -1.73
LRTOMT-217ENST00000539587 MGPP08493 103 aa4.25□□□□□ -1.73
LRTOMT-217ENST00000539587 ESDP10768 282 aa4.25□□□□□ -1.73
LRTOMT-217ENST00000539587 RPL13AP40429 203 aaKnown RBP4.25□□□□□ -1.73
LRTOMT-217ENST00000539587 ENKURQ8TC29 256 aa4.25□□□□□ -1.73
LRTOMT-217ENST00000539587 C2orf48Q96LS8 159 aa4.25□□□□□ -1.73
LRTOMT-217ENST00000539587 RPP21Q9H633 154 aaKnown RBP4.25□□□□□ -1.73
LRTOMT-217ENST00000539587 CDC42SE2Q9NRR3 84 aa4.25□□□□□ -1.73
LRTOMT-217ENST00000539587 FAM168BA1KXE4 195 aa4.24□□□□□ -1.73
LRTOMT-217ENST00000539587 MAP1LC3B2A6NCE7 125 aa4.24□□□□□ -1.73
LRTOMT-217ENST00000539587 ZNF561-AS1K7EIQ3 104 aa4.24□□□□□ -1.73
LRTOMT-217ENST00000539587 PAGE4O60829 102 aa4.24□□□□□ -1.73
LRTOMT-217ENST00000539587 UPK1BO75841 260 aa4.24□□□□□ -1.73
LRTOMT-217ENST00000539587 APOMO95445 188 aa4.24□□□□□ -1.73
LRTOMT-217ENST00000539587 ZNF25P17030 456 aaPredicted RBP4.24□□□□□ -1.73
LRTOMT-217ENST00000539587 AKR1C3P42330 323 aa4.24□□□□□ -1.73
LRTOMT-217ENST00000539587 TMUB2Q71RG4 321 aa4.24□□□□□ -1.73
LRTOMT-217ENST00000539587 C9orf62Q8N4C0 152 aa4.24□□□□□ -1.73
LRTOMT-217ENST00000539587 STOML3Q8TAV4 291 aa4.24□□□□□ -1.73
LRTOMT-217ENST00000539587 MAP1LC3BQ9GZQ8 125 aa4.24□□□□□ -1.73
LRTOMT-217ENST00000539587 CYTL1Q9NRR1 136 aa4.24□□□□□ -1.73
LRTOMT-217ENST00000539587 A0A087WZ39 114 aa4.23□□□□□ -1.73
LRTOMT-217ENST00000539587 TRAV1-1A0A0B4J248 108 aa4.23□□□□□ -1.73
LRTOMT-217ENST00000539587 SCO2A0A1W2PP80 73 aa4.23□□□□□ -1.73
LRTOMT-217ENST00000539587 F2Z2F3 143 aa4.23□□□□□ -1.73
LRTOMT-217ENST00000539587 CST9LP1Q5W188 147 aa4.23□□□□□ -1.73
LRTOMT-217ENST00000539587 AMMECR1LQ6DCA0 310 aa4.23□□□□□ -1.73
LRTOMT-217ENST00000539587 RNASEKQ6P5S7 137 aaKnown RBP4.23□□□□□ -1.73
LRTOMT-217ENST00000539587 LYZL1Q6UWQ5 148 aa4.23□□□□□ -1.73
LRTOMT-217ENST00000539587 MRPL52Q86TS9 123 aaKnown RBP4.23□□□□□ -1.73
LRTOMT-217ENST00000539587 MBD3L1Q8WWY6 194 aa4.23□□□□□ -1.73
LRTOMT-217ENST00000539587 ISOC2Q96AB3 205 aa4.23□□□□□ -1.73
LRTOMT-217ENST00000539587 CNFNQ9BYD5 112 aa4.23□□□□□ -1.73
LRTOMT-217ENST00000539587 BCL2L11O43521 198 aa4.22□□□□□ -1.73
LRTOMT-217ENST00000539587 TSPAN13O95857 204 aa4.22□□□□□ -1.73
LRTOMT-217ENST00000539587 RPL39LQ96EH5 51 aaKnown RBP4.22□□□□□ -1.73
LRTOMT-217ENST00000539587 OPRPNQ99935 248 aaPredicted RBP4.22□□□□□ -1.73
LRTOMT-217ENST00000539587 SSPOA2VEC9 5147 aa4.21□□□□□ -1.73
LRTOMT-217ENST00000539587 A0A087X002 238 aa4.21□□□□□ -1.74
LRTOMT-217ENST00000539587 TRBV6-5A0A0K0K1A5 114 aa4.21□□□□□ -1.74
LRTOMT-217ENST00000539587 SDHAF1A6NFY7 115 aa4.21□□□□□ -1.74
LRTOMT-217ENST00000539587 G3V3Q6 166 aa4.21□□□□□ -1.74
LRTOMT-217ENST00000539587 TSHBP01222 138 aa4.21□□□□□ -1.74
LRTOMT-217ENST00000539587 TLX1NBP0CAT3 122 aa4.21□□□□□ -1.74
LRTOMT-217ENST00000539587 TRGC1P0CF51 173 aa4.21□□□□□ -1.74
LRTOMT-217ENST00000539587 RPL35P42766 123 aaKnown RBP4.21□□□□□ -1.74
LRTOMT-217ENST00000539587 FOXA3P55318 350 aaPredicted RBP4.21□□□□□ -1.74
LRTOMT-217ENST00000539587 RPS20P60866 119 aaKnown RBP4.21□□□□□ -1.74
LRTOMT-217ENST00000539587 SS18Q15532 418 aa4.21□□□□□ -1.74
LRTOMT-217ENST00000539587 TPRXLQ17RH7 258 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms