RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 VSIG2Q96IQ7 327 aa13.67□□□□□ -0.22
EFCAB11-202ENST00000538485 Q6ZTC4 211 aa13.66□□□□□ -0.22
EFCAB11-202ENST00000538485 PAX4O43316 350 aa13.65□□□□□ -0.22
EFCAB11-202ENST00000538485 C3orf79P0CE67 100 aa13.65□□□□□ -0.22
EFCAB11-202ENST00000538485 KRTDAPP60985 99 aa13.65□□□□□ -0.22
EFCAB11-202ENST00000538485 DEFA6Q01524 100 aa13.65□□□□□ -0.22
EFCAB11-202ENST00000538485 PYY3Q5JQD4 70 aa13.65□□□□□ -0.22
EFCAB11-202ENST00000538485 C2orf66Q6UXQ4 117 aa13.65□□□□□ -0.22
EFCAB11-202ENST00000538485 DAZ4Q86SG3 579 aaKnown RBP13.65□□□□□ -0.22
EFCAB11-202ENST00000538485 C11orf45Q8TAV5 145 aa13.65□□□□□ -0.22
EFCAB11-202ENST00000538485 DAZ3Q9NR90 486 aaKnown RBP13.65□□□□□ -0.22
EFCAB11-202ENST00000538485 HSPB8Q9UJY1 196 aa13.65□□□□□ -0.22
EFCAB11-202ENST00000538485 TRAV26-1A0A087WT03 109 aa13.65□□□□□ -0.22
EFCAB11-202ENST00000538485 A0A0J9YY99 117 aa13.65□□□□□ -0.22
EFCAB11-202ENST00000538485 LINC00694P0DN24 101 aa13.65□□□□□ -0.22
EFCAB11-202ENST00000538485 GYPEP15421 78 aa13.65□□□□□ -0.22
EFCAB11-202ENST00000538485 NANOS2P60321 138 aaKnown RBP13.65□□□□□ -0.22
EFCAB11-202ENST00000538485 TOMM6Q96B49 74 aa13.64□□□□□ -0.23
EFCAB11-202ENST00000538485 RPL39P62891 51 aaKnown RBP13.63□□□□□ -0.23
EFCAB11-202ENST00000538485 COTL1Q14019 142 aa13.63□□□□□ -0.23
EFCAB11-202ENST00000538485 JOSD1Q15040 202 aaPredicted RBP13.62□□□□□ -0.23
EFCAB11-202ENST00000538485 NTM-AS1Q6ZSK4 140 aa13.62□□□□□ -0.23
EFCAB11-202ENST00000538485 C20orf203Q8NBC4 194 aa13.62□□□□□ -0.23
EFCAB11-202ENST00000538485 IFI27L1Q96BM0 104 aa13.61□□□□□ -0.23
EFCAB11-202ENST00000538485 CHCHD7Q9BUK0 85 aa13.61□□□□□ -0.23
EFCAB11-202ENST00000538485 CYSLTR1Q9Y271 337 aa13.61□□□□□ -0.23
EFCAB11-202ENST00000538485 G0S2P27469 103 aa13.61□□□□□ -0.23
EFCAB11-202ENST00000538485 MAP1LC3CQ9BXW4 147 aa13.61□□□□□ -0.23
EFCAB11-202ENST00000538485 SYS1-DBNDD2H3BUS1 97 aa13.6□□□□□ -0.23
EFCAB11-202ENST00000538485 SPATA12Q7Z6I5 190 aa13.59□□□□□ -0.23
EFCAB11-202ENST00000538485 SCGB3A1Q96QR1 104 aa13.59□□□□□ -0.23
EFCAB11-202ENST00000538485 H0Y8G0 127 aa13.59□□□□□ -0.23
EFCAB11-202ENST00000538485 Q8N976 141 aa13.59□□□□□ -0.23
EFCAB11-202ENST00000538485 A0A096LPF7 62 aa13.58□□□□□ -0.24
EFCAB11-202ENST00000538485 SCGB1D1O95968 90 aa13.58□□□□□ -0.24
EFCAB11-202ENST00000538485 ERASQ7Z444 233 aa13.58□□□□□ -0.24
EFCAB11-202ENST00000538485 ATP6V0E2Q8NHE4 81 aa13.58□□□□□ -0.24
EFCAB11-202ENST00000538485 GTSF1LQ9H1H1 148 aa13.58□□□□□ -0.24
EFCAB11-202ENST00000538485 IGIPA6NJ69 53 aa13.57□□□□□ -0.24
EFCAB11-202ENST00000538485 ATP5LO75964 103 aa13.57□□□□□ -0.24
EFCAB11-202ENST00000538485 SMIM6P0DI80 62 aa13.57□□□□□ -0.24
EFCAB11-202ENST00000538485 CDPF1Q6NVV7 123 aa13.57□□□□□ -0.24
EFCAB11-202ENST00000538485 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.57□□□□□ -0.24
EFCAB11-202ENST00000538485 IGKV2-29A2NJV5 120 aaPredicted RBP13.57□□□□□ -0.24
EFCAB11-202ENST00000538485 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.57□□□□□ -0.24
EFCAB11-202ENST00000538485 DEFB131BA0A096LNP1 70 aa13.56□□□□□ -0.24
EFCAB11-202ENST00000538485 LINC01549A6NIU2 74 aa13.56□□□□□ -0.24
EFCAB11-202ENST00000538485 NHLRC4P0CG21 123 aaPredicted RBP13.55□□□□□ -0.24
EFCAB11-202ENST00000538485 PET117Q6UWS5 81 aa13.55□□□□□ -0.24
EFCAB11-202ENST00000538485 LINC00518Q8N0U6 118 aa13.55□□□□□ -0.24
EFCAB11-202ENST00000538485 FBN3Q75N90 2809 aa13.54□□□□□ -0.24
EFCAB11-202ENST00000538485 TRBV6-8A0A0A6YYG3 113 aa13.54□□□□□ -0.24
EFCAB11-202ENST00000538485 PRSS1P07477 247 aa13.54□□□□□ -0.24
EFCAB11-202ENST00000538485 MRPL23Q16540 153 aaKnown RBP13.54□□□□□ -0.24
EFCAB11-202ENST00000538485 TIMM17AQ99595 171 aa13.54□□□□□ -0.24
EFCAB11-202ENST00000538485 CEMP1Q6PRD7 247 aaPredicted RBP13.53□□□□□ -0.24
EFCAB11-202ENST00000538485 C12orf57Q99622 126 aa13.53□□□□□ -0.24
EFCAB11-202ENST00000538485 ICOSQ9Y6W8 199 aa13.53□□□□□ -0.24
EFCAB11-202ENST00000538485 TRBV25-1A0A075B6N4 114 aa13.53□□□□□ -0.24
EFCAB11-202ENST00000538485 H3BNG1 76 aa13.53□□□□□ -0.24
EFCAB11-202ENST00000538485 Q6ZN92 141 aa13.53□□□□□ -0.24
EFCAB11-202ENST00000538485 OPRPNQ99935 248 aaPredicted RBP13.53□□□□□ -0.24
EFCAB11-202ENST00000538485 PMCHL2Q9BQD1 86 aa13.53□□□□□ -0.24
EFCAB11-202ENST00000538485 UBE2D4Q9Y2X8 147 aa13.53□□□□□ -0.24
EFCAB11-202ENST00000538485 LINC01545Q5VT33 79 aa13.52□□□□□ -0.25
EFCAB11-202ENST00000538485 BAALCQ8WXS3 180 aa13.52□□□□□ -0.25
EFCAB11-202ENST00000538485 FAM104AQ969W3 186 aa13.51□□□□□ -0.25
EFCAB11-202ENST00000538485 TMEM141Q96I45 108 aa13.51□□□□□ -0.25
EFCAB11-202ENST00000538485 TMEM243Q9BU79 118 aa13.51□□□□□ -0.25
EFCAB11-202ENST00000538485 PYGO1Q9Y3Y4 419 aa13.51□□□□□ -0.25
EFCAB11-202ENST00000538485 TRAV10A0A0B4J240 114 aa13.5□□□□□ -0.25
EFCAB11-202ENST00000538485 TMEM97Q5BJF2 176 aa13.5□□□□□ -0.25
EFCAB11-202ENST00000538485 ZC2HC1BQ5TFG8 222 aa13.49□□□□□ -0.25
EFCAB11-202ENST00000538485 LGALS9CQ6DKI2 356 aa13.49□□□□□ -0.25
EFCAB11-202ENST00000538485 IGLV4-3A0A075B6K6 122 aa13.48□□□□□ -0.25
EFCAB11-202ENST00000538485 C20orf202A1L168 122 aa13.48□□□□□ -0.25
EFCAB11-202ENST00000538485 ODF1Q14990 250 aa13.48□□□□□ -0.25
EFCAB11-202ENST00000538485 SH2D6Q7Z4S9 175 aa13.48□□□□□ -0.25
EFCAB11-202ENST00000538485 ATOH7Q8N100 152 aa13.48□□□□□ -0.25
EFCAB11-202ENST00000538485 SPANXA1Q9NS26 97 aa13.48□□□□□ -0.25
EFCAB11-202ENST00000538485 FGF6P10767 208 aa13.48□□□□□ -0.25
EFCAB11-202ENST00000538485 UBE2L6O14933 153 aa13.47□□□□□ -0.25
EFCAB11-202ENST00000538485 CHCHD5Q9BSY4 110 aa13.47□□□□□ -0.25
EFCAB11-202ENST00000538485 A0A087WX48 190 aa13.46□□□□□ -0.25
EFCAB11-202ENST00000538485 TRAV12-1A0A0B4J245 112 aa13.46□□□□□ -0.25
EFCAB11-202ENST00000538485 PRSS29PA6NIE9 313 aa13.46□□□□□ -0.25
EFCAB11-202ENST00000538485 TEX43Q6ZNM6 134 aa13.46□□□□□ -0.25
EFCAB11-202ENST00000538485 MRPL52Q86TS9 123 aaKnown RBP13.46□□□□□ -0.25
EFCAB11-202ENST00000538485 TIMM21Q9BVV7 248 aa13.46□□□□□ -0.25
EFCAB11-202ENST00000538485 CSMD3Q7Z407 3707 aa13.46□□□□□ -0.25
EFCAB11-202ENST00000538485 PMVKQ15126 192 aa13.46□□□□□ -0.26
EFCAB11-202ENST00000538485 H7C423 109 aa13.45□□□□□ -0.26
EFCAB11-202ENST00000538485 GAGE6Q13070 117 aa13.45□□□□□ -0.26
EFCAB11-202ENST00000538485 RNASE13Q5GAN3 156 aaKnown RBP13.45□□□□□ -0.26
EFCAB11-202ENST00000538485 CST9LQ9H4G1 147 aa13.45□□□□□ -0.26
EFCAB11-202ENST00000538485 MRPL35Q9NZE8 188 aaKnown RBP13.45□□□□□ -0.26
EFCAB11-202ENST00000538485 CSDC2Q9Y534 153 aaKnown RBP13.45□□□□□ -0.26
EFCAB11-202ENST00000538485 NPSP0C0P6 89 aa13.44□□□□□ -0.26
EFCAB11-202ENST00000538485 DGAT2L7PQ6IED9 249 aa13.44□□□□□ -0.26
EFCAB11-202ENST00000538485 LYPD5Q6UWN5 251 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms