RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 CCL20P78556 96 aa1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 PSG9Q00887 426 aa1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 FLI1Q01543 452 aaPredicted RBP1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 BTN1A1Q13410 526 aa1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 SPINK13Q1W4C9 94 aa1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 LGALSLQ3ZCW2 172 aaPredicted RBP1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 C10orf113Q5VZT2 155 aa1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 FOXI2Q6ZQN5 318 aa1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 GOLT1AQ6ZVE7 132 aa1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 ATP5L2Q7Z4Y8 100 aa1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 PCP2Q8IVA1 136 aa1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 TMEM256Q8N2U0 113 aa1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 ZFAND2AQ8N6M9 145 aa1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 SLC25A29Q8N8R3 303 aa1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 FER1L6-AS1Q8NA97 138 aa1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 OR4B1Q8NGF8 309 aa1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 MBD3L1Q8WWY6 194 aa1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 RPUSD4Q96CM3 377 aaKnown RBP1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 PHYHIPLQ96FC7 376 aa1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 TMEM14CQ9P0S9 112 aa1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 TP53TG3Q9ULZ0 132 aa1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 FUT9Q9Y231 359 aa1.75□□□□□ -2.13
TNFRSF1A-210ENST00000537842 PKHD1L1Q86WI1 4243 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 FXYD6-FXYD2A0A087WZ82 144 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 LCE6AA0A183 80 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 LINC00862A6NCI5 91 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 KLLNB2CW77 178 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 EPM2AB3EWF7 344 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 GGTLC3B5MD39 225 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 TMEM250H0YL14 139 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 ARPC5O15511 151 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 INSP01308 110 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 ARL14EPLP0DKL9 152 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 RPL7P18124 248 aaKnown RBP1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 S100A1P23297 94 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 GCHFRP30047 84 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 CRIP1P50238 77 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 ZNF80P51504 273 aaPredicted RBP1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 EMP1P54849 157 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 CMC4P56277 68 aaPredicted RBP1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 SNRPD3P62318 126 aaKnown RBP1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 GNG5P63218 68 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 HIST1H1AQ02539 215 aaPredicted RBP1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 LYRM7Q5U5X0 104 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 CEMP1Q6PRD7 247 aaPredicted RBP1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 NEGR1Q7Z3B1 354 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 BPIFA4PQ86YQ2 179 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 Q8N377 158 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 KCNRGQ8N5I3 272 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 Q8TAT8 98 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 KCNS1Q96KK3 526 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 IGF2BP2-AS1Q96M15 143 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 PFDN5Q99471 154 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 CHCHD7Q9BUK0 85 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 GTSF1LQ9H1H1 148 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 APLNQ9ULZ1 77 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 TNXBP22105 4242 aa1.74□□□□□ -2.13
TNFRSF1A-210ENST00000537842 BORCS7-ASMTA0A0B4J1R7 106 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 TRAV12-3A0A0B4J271 114 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 MAP1LC3B2A6NCE7 125 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 HMSDA8MTL9 139 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 C8orf87E5RJ46 101 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 KRTAP4-16G5E9R7 235 aaPredicted RBP1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 BPY2O14599 106 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 GNRH2O43555 120 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 APOMO95445 188 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 HLA-DQA1P01909 254 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 APCSP02743 223 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 PPBPP02775 128 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 MIFP14174 115 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 HTN1P15515 57 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 RNASE4P34096 147 aaKnown RBP1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 KRTAP10-7P60409 375 aaPredicted RBP1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 REG3AQ06141 175 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 IBA57Q5T440 356 aaKnown RBP1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 EBLN2Q6P2I7 272 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 MORN3Q6PF18 240 aaPredicted RBP1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 LCN15Q6UWW0 184 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 DPPA3Q6W0C5 159 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 Q6ZTI0 123 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 KRTAP7-1Q8IUC3 87 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 TCTE3Q8IZS6 198 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 C9orf62Q8N4C0 152 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 SMIM20Q8N5G0 67 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 LINC00612Q8N6U2 182 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 TMEM75Q8N9X5 138 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 C20orf203Q8NBC4 194 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 FAM104AQ969W3 186 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 NARS2Q96I59 477 aaKnown RBP1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 HYLS1Q96M11 299 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 GPR82Q96P67 336 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 PSMG3Q9BT73 122 aaPredicted RBP1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 MAP1LC3BQ9GZQ8 125 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 C11orf68Q9H3H3 251 aaKnown RBP1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 NOP10Q9NPE3 64 aaKnown RBP1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 ZNF492Q9P255 531 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 TIMM9Q9Y5J7 89 aa1.73□□□□□ -2.13
TNFRSF1A-210ENST00000537842 IGLL5B9A064 214 aa1.72□□□□□ -2.13
TNFRSF1A-210ENST00000537842 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.72□□□□□ -2.13
TNFRSF1A-210ENST00000537842 OR7C2O60412 319 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 217 ms