RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 JOSD1Q15040 202 aaPredicted RBP5.89□□□□□ -1.47
USP28-205ENST00000537706 Q6AWC8 147 aa5.89□□□□□ -1.47
USP28-205ENST00000537706 OR2D3Q8NGH3 330 aa5.89□□□□□ -1.47
USP28-205ENST00000537706 C7orf33Q8WU49 177 aa5.89□□□□□ -1.47
USP28-205ENST00000537706 GTSF1Q8WW33 167 aa5.89□□□□□ -1.47
USP28-205ENST00000537706 MRPL53Q96EL3 112 aaKnown RBP5.89□□□□□ -1.47
USP28-205ENST00000537706 IGKV2-40A0A087WW87 121 aaPredicted RBP5.89□□□□□ -1.47
USP28-205ENST00000537706 C7orf71A4D174 169 aa5.89□□□□□ -1.47
USP28-205ENST00000537706 RBAKDNA6NC62 111 aa5.89□□□□□ -1.47
USP28-205ENST00000537706 IGKV2D-40P01614 121 aaPredicted RBP5.89□□□□□ -1.47
USP28-205ENST00000537706 SAPCD1Q5SSQ6 148 aa5.89□□□□□ -1.47
USP28-205ENST00000537706 DPH3Q96FX2 82 aa5.89□□□□□ -1.47
USP28-205ENST00000537706 MUC2Q02817 5179 aa5.89□□□□□ -1.47
USP28-205ENST00000537706 IGKV2D-24A0A075B6R9 120 aa5.88□□□□□ -1.47
USP28-205ENST00000537706 SERF1AO75920 110 aa5.88□□□□□ -1.47
USP28-205ENST00000537706 FOXA3P55318 350 aaPredicted RBP5.88□□□□□ -1.47
USP28-205ENST00000537706 LCE2DQ5TA82 110 aaPredicted RBP5.88□□□□□ -1.47
USP28-205ENST00000537706 BAGE3Q86Y29 109 aa5.88□□□□□ -1.47
USP28-205ENST00000537706 KCNS1Q96KK3 526 aa5.88□□□□□ -1.47
USP28-205ENST00000537706 A0A1B0GW15 77 aa5.87□□□□□ -1.47
USP28-205ENST00000537706 FAM162BQ5T6X4 162 aa5.87□□□□□ -1.47
USP28-205ENST00000537706 PGLYRP4Q96LB8 373 aa5.87□□□□□ -1.47
USP28-205ENST00000537706 NDFIP1Q9BT67 221 aa5.87□□□□□ -1.47
USP28-205ENST00000537706 F2Z2F3 143 aa5.87□□□□□ -1.47
USP28-205ENST00000537706 NUPR1O60356 82 aa5.87□□□□□ -1.47
USP28-205ENST00000537706 SH2D1AO60880 128 aa5.87□□□□□ -1.47
USP28-205ENST00000537706 GZMBP10144 247 aa5.87□□□□□ -1.47
USP28-205ENST00000537706 CRIP1P50238 77 aa5.87□□□□□ -1.47
USP28-205ENST00000537706 KIAA1644Q3SXP7 199 aa5.87□□□□□ -1.47
USP28-205ENST00000537706 GATD1Q8NB37 220 aa5.87□□□□□ -1.47
USP28-205ENST00000537706 ZNF479Q96JC4 524 aa5.87□□□□□ -1.47
USP28-205ENST00000537706 A0A1B0GUT8 65 aa5.86□□□□□ -1.47
USP28-205ENST00000537706 CAMPP49913 170 aa5.86□□□□□ -1.47
USP28-205ENST00000537706 Q8TAT8 98 aa5.86□□□□□ -1.47
USP28-205ENST00000537706 C18orf32Q8TCD1 76 aa5.86□□□□□ -1.47
USP28-205ENST00000537706 CTRLP40313 264 aa5.86□□□□□ -1.47
USP28-205ENST00000537706 RPS20P60866 119 aaKnown RBP5.86□□□□□ -1.47
USP28-205ENST00000537706 RIGQ13278 110 aa5.86□□□□□ -1.47
USP28-205ENST00000537706 IQCJQ1A5X6 159 aa5.86□□□□□ -1.47
USP28-205ENST00000537706 BORCS7Q96B45 105 aa5.86□□□□□ -1.47
USP28-205ENST00000537706 PRADC1Q9BSG0 188 aa5.86□□□□□ -1.47
USP28-205ENST00000537706 ALKBH7Q9BT30 221 aaPredicted RBP5.86□□□□□ -1.47
USP28-205ENST00000537706 SSBP4Q9BWG4 385 aaPredicted RBP5.86□□□□□ -1.47
USP28-205ENST00000537706 SAMD10Q9BYL1 202 aa5.86□□□□□ -1.47
USP28-205ENST00000537706 TRAV4A0A0B4J268 109 aa5.85□□□□□ -1.47
USP28-205ENST00000537706 OR4C5Q8NGB2 326 aa5.85□□□□□ -1.47
USP28-205ENST00000537706 RNF185Q96GF1 192 aa5.85□□□□□ -1.47
USP28-205ENST00000537706 IGHV1OR15-1A0A075B7D0 117 aa5.84□□□□□ -1.47
USP28-205ENST00000537706 LOC100131303A0A0U1RQF7 123 aa5.84□□□□□ -1.47
USP28-205ENST00000537706 PRAC2D3DTV9 90 aa5.84□□□□□ -1.47
USP28-205ENST00000537706 ARMS2P0C7Q2 107 aa5.84□□□□□ -1.47
USP28-205ENST00000537706 DGAT2L7PQ6IED9 249 aa5.84□□□□□ -1.47
USP28-205ENST00000537706 GTSF1LQ9H1H1 148 aa5.84□□□□□ -1.47
USP28-205ENST00000537706 KIF25-AS1Q9Y6Z4 181 aa5.84□□□□□ -1.47
USP28-205ENST00000537706 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.84□□□□□ -1.47
USP28-205ENST00000537706 LINC00587B1AMM8 73 aa5.84□□□□□ -1.48
USP28-205ENST00000537706 TSTD3H0UI37 97 aa5.84□□□□□ -1.48
USP28-205ENST00000537706 GPX1P07203 203 aa5.84□□□□□ -1.48
USP28-205ENST00000537706 RNASE4P34096 147 aaKnown RBP5.84□□□□□ -1.48
USP28-205ENST00000537706 AMTP48728 403 aa5.84□□□□□ -1.48
USP28-205ENST00000537706 ZNF138P52744 262 aa5.84□□□□□ -1.48
USP28-205ENST00000537706 PKIAP61925 76 aa5.84□□□□□ -1.48
USP28-205ENST00000537706 LINC01559Q495D7 138 aa5.84□□□□□ -1.48
USP28-205ENST00000537706 TMEM78Q5T7P6 136 aa5.84□□□□□ -1.48
USP28-205ENST00000537706 DMRTA1Q5VZB9 504 aa5.84□□□□□ -1.48
USP28-205ENST00000537706 SPINK6Q6UWN8 80 aa5.84□□□□□ -1.48
USP28-205ENST00000537706 SPXQ9BT56 116 aa5.84□□□□□ -1.48
USP28-205ENST00000537706 IGLC6P0CF74 106 aa5.83□□□□□ -1.48
USP28-205ENST00000537706 ZNF80P51504 273 aaPredicted RBP5.83□□□□□ -1.48
USP28-205ENST00000537706 ERCC8Q13216 396 aa5.83□□□□□ -1.48
USP28-205ENST00000537706 DAZ4Q86SG3 579 aaKnown RBP5.83□□□□□ -1.48
USP28-205ENST00000537706 DAZ3Q9NR90 486 aaKnown RBP5.83□□□□□ -1.48
USP28-205ENST00000537706 NAGKQ9UJ70 344 aa5.83□□□□□ -1.48
USP28-205ENST00000537706 LENEPQ9Y5L5 61 aa5.83□□□□□ -1.48
USP28-205ENST00000537706 TRAV26-2A0A0B4J265 109 aa5.82□□□□□ -1.48
USP28-205ENST00000537706 FABP5P3A8MUU1 101 aa5.82□□□□□ -1.48
USP28-205ENST00000537706 PMCHP20382 165 aa5.82□□□□□ -1.48
USP28-205ENST00000537706 LYZL1Q6UWQ5 148 aa5.82□□□□□ -1.48
USP28-205ENST00000537706 C9orf163Q8N9P6 203 aa5.82□□□□□ -1.48
USP28-205ENST00000537706 FER1L6-AS1Q8NA97 138 aa5.82□□□□□ -1.48
USP28-205ENST00000537706 CNFNQ9BYD5 112 aa5.82□□□□□ -1.48
USP28-205ENST00000537706 AGPAT4-IT1Q9H0P7 198 aa5.82□□□□□ -1.48
USP28-205ENST00000537706 TMSB15BA0A087X1C1 80 aa5.82□□□□□ -1.48
USP28-205ENST00000537706 HSBP1O75506 76 aa5.82□□□□□ -1.48
USP28-205ENST00000537706 SCGB1D1O95968 90 aa5.82□□□□□ -1.48
USP28-205ENST00000537706 RNASEKQ6P5S7 137 aaKnown RBP5.82□□□□□ -1.48
USP28-205ENST00000537706 RASL10AQ92737 203 aa5.82□□□□□ -1.48
USP28-205ENST00000537706 CHCHD1Q96BP2 118 aaKnown RBP5.82□□□□□ -1.48
USP28-205ENST00000537706 TPPP3Q9BW30 176 aa5.82□□□□□ -1.48
USP28-205ENST00000537706 KLLNB2CW77 178 aa5.81□□□□□ -1.48
USP28-205ENST00000537706 RHOHQ15669 191 aa5.81□□□□□ -1.48
USP28-205ENST00000537706 TEX43Q6ZNM6 134 aa5.81□□□□□ -1.48
USP28-205ENST00000537706 NIT1Q86X76 327 aa5.81□□□□□ -1.48
USP28-205ENST00000537706 LINC00477Q96M19 166 aa5.81□□□□□ -1.48
USP28-205ENST00000537706 TRBV7-9A0A0J9YWB2 115 aa5.8□□□□□ -1.48
USP28-205ENST00000537706 GATA1P15976 413 aaPredicted RBP5.8□□□□□ -1.48
USP28-205ENST00000537706 C1orf43Q9BWL3 253 aa5.8□□□□□ -1.48
USP28-205ENST00000537706 NTF3P20783 257 aa5.8□□□□□ -1.48
USP28-205ENST00000537706 DDTP30046 118 aa5.8□□□□□ -1.48
USP28-205ENST00000537706 PRR3P79522 188 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms