RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 OXTP01178 125 aa8.17□□□□□ -1.1
CLSTN3-207ENST00000537408 LOXP28300 417 aaPredicted RBP8.17□□□□□ -1.1
CLSTN3-207ENST00000537408 SERP1Q9Y6X1 66 aa8.17□□□□□ -1.1
CLSTN3-207ENST00000537408 TRAV12-2A0A075B6T6 113 aa8.17□□□□□ -1.1
CLSTN3-207ENST00000537408 IGHV7-4-1A0A0J9YVY3 117 aa8.17□□□□□ -1.1
CLSTN3-207ENST00000537408 DAZ2Q13117 558 aaKnown RBP8.17□□□□□ -1.1
CLSTN3-207ENST00000537408 DAZ4Q86SG3 579 aaKnown RBP8.17□□□□□ -1.1
CLSTN3-207ENST00000537408 DAZ1Q9NQZ3 744 aaKnown RBP8.17□□□□□ -1.1
CLSTN3-207ENST00000537408 DAZ3Q9NR90 486 aaKnown RBP8.17□□□□□ -1.1
CLSTN3-207ENST00000537408 BAALC-AS2P0C853 105 aa8.17□□□□□ -1.1
CLSTN3-207ENST00000537408 C22orf34Q6ZV56 151 aa8.17□□□□□ -1.1
CLSTN3-207ENST00000537408 BRD3OSQ6XYD6 125 aa8.17□□□□□ -1.1
CLSTN3-207ENST00000537408 LINC00336Q6ZUF6 198 aa8.17□□□□□ -1.1
CLSTN3-207ENST00000537408 TEX22C9J3V5 150 aa8.16□□□□□ -1.1
CLSTN3-207ENST00000537408 K7EIM0 57 aa8.16□□□□□ -1.1
CLSTN3-207ENST00000537408 IGSF10Q6WRI0 2623 aa8.16□□□□□ -1.1
CLSTN3-207ENST00000537408 USP17L23D6RBM5 183 aa8.16□□□□□ -1.1
CLSTN3-207ENST00000537408 CFAP46Q8IYW2 2715 aa8.16□□□□□ -1.1
CLSTN3-207ENST00000537408 IGIPA6NJ69 53 aa8.16□□□□□ -1.1
CLSTN3-207ENST00000537408 RBMY1BA6NDE4 496 aaKnown RBP8.15□□□□□ -1.1
CLSTN3-207ENST00000537408 RBMY1EA6NEQ0 496 aaKnown RBP8.15□□□□□ -1.1
CLSTN3-207ENST00000537408 BUB1B-PAK6H3BSN5 160 aa8.15□□□□□ -1.1
CLSTN3-207ENST00000537408 RBMY1DP0C7P1 496 aaKnown RBP8.15□□□□□ -1.1
CLSTN3-207ENST00000537408 RBMY1A1P0DJD3 496 aaKnown RBP8.15□□□□□ -1.1
CLSTN3-207ENST00000537408 RBMY1CP0DJD4 496 aa8.15□□□□□ -1.1
CLSTN3-207ENST00000537408 RBMY1FQ15415 496 aaKnown RBP8.15□□□□□ -1.1
CLSTN3-207ENST00000537408 MIAQ16674 131 aa8.15□□□□□ -1.1
CLSTN3-207ENST00000537408 Q6JHZ5 121 aa8.15□□□□□ -1.1
CLSTN3-207ENST00000537408 PRIMA1Q86XR5 153 aa8.15□□□□□ -1.1
CLSTN3-207ENST00000537408 IGHV4-31P0DP07 118 aa8.15□□□□□ -1.1
CLSTN3-207ENST00000537408 CLEC19AQ6UXS0 136 aa8.15□□□□□ -1.1
CLSTN3-207ENST00000537408 IGKV3D-7A0A0C4DH55 119 aa8.15□□□□□ -1.11
CLSTN3-207ENST00000537408 KNCNA6PVL3 124 aa8.15□□□□□ -1.11
CLSTN3-207ENST00000537408 TMEM86BQ8N661 226 aa8.15□□□□□ -1.11
CLSTN3-207ENST00000537408 COX7A2LO14548 114 aa8.15□□□□□ -1.11
CLSTN3-207ENST00000537408 IGHV1-69P01742 117 aa8.15□□□□□ -1.11
CLSTN3-207ENST00000537408 TIRAPP58753 221 aa8.14□□□□□ -1.11
CLSTN3-207ENST00000537408 MINOS1Q5TGZ0 78 aa8.14□□□□□ -1.11
CLSTN3-207ENST00000537408 C11orf71Q6IPW1 123 aa8.14□□□□□ -1.11
CLSTN3-207ENST00000537408 TMEM61Q8N0U2 210 aa8.14□□□□□ -1.11
CLSTN3-207ENST00000537408 KAAG1Q9UBP8 84 aa8.14□□□□□ -1.11
CLSTN3-207ENST00000537408 MINOS1-NBL1R4GNA1 71 aa8.14□□□□□ -1.11
CLSTN3-207ENST00000537408 TSHBP01222 138 aa8.14□□□□□ -1.11
CLSTN3-207ENST00000537408 PSMB8P28062 276 aa8.14□□□□□ -1.11
CLSTN3-207ENST00000537408 CIRBPQ14011 172 aaKnown RBP8.14□□□□□ -1.11
CLSTN3-207ENST00000537408 UPK3BQ9BT76 320 aa8.14□□□□□ -1.11
CLSTN3-207ENST00000537408 IGHG2P01859 326 aa8.14□□□□□ -1.11
CLSTN3-207ENST00000537408 C11orf21Q9P2W6 132 aa8.14□□□□□ -1.11
CLSTN3-207ENST00000537408 RPL39P62891 51 aaKnown RBP8.13□□□□□ -1.11
CLSTN3-207ENST00000537408 CYSTM1Q9H1C7 97 aa8.13□□□□□ -1.11
CLSTN3-207ENST00000537408 NDUFA12Q9UI09 145 aa8.13□□□□□ -1.11
CLSTN3-207ENST00000537408 H3BUX3 64 aa8.13□□□□□ -1.11
CLSTN3-207ENST00000537408 DYNLRB2Q8TF09 96 aa8.13□□□□□ -1.11
CLSTN3-207ENST00000537408 ANKRD17O75179 2603 aaKnown RBP8.13□□□□□ -1.11
CLSTN3-207ENST00000537408 PRRC2CQ9Y520 2896 aaKnown RBP8.13□□□□□ -1.11
CLSTN3-207ENST00000537408 SETD2Q9BYW2 2564 aaPredicted RBP8.13□□□□□ -1.11
CLSTN3-207ENST00000537408 ACANP16112 2415 aa8.13□□□□□ -1.11
CLSTN3-207ENST00000537408 SMIM26A0A096LP01 95 aa8.13□□□□□ -1.11
CLSTN3-207ENST00000537408 ZNF575Q86XF7 245 aa8.13□□□□□ -1.11
CLSTN3-207ENST00000537408 CFAP54Q96N23 3096 aa8.13□□□□□ -1.11
CLSTN3-207ENST00000537408 PRAC2D3DTV9 90 aa8.12□□□□□ -1.11
CLSTN3-207ENST00000537408 EDN2P20800 178 aa8.12□□□□□ -1.11
CLSTN3-207ENST00000537408 BRK1Q8WUW1 75 aa8.12□□□□□ -1.11
CLSTN3-207ENST00000537408 C20orf173Q96LM9 149 aa8.12□□□□□ -1.11
CLSTN3-207ENST00000537408 DSPP15924 2871 aaKnown RBP8.12□□□□□ -1.11
CLSTN3-207ENST00000537408 SAA4P35542 130 aa8.12□□□□□ -1.11
CLSTN3-207ENST00000537408 FAM222AQ5U5X8 452 aa8.12□□□□□ -1.11
CLSTN3-207ENST00000537408 RNF5Q99942 180 aa8.12□□□□□ -1.11
CLSTN3-207ENST00000537408 ADARB2-AS1A8MUL3 147 aa8.12□□□□□ -1.11
CLSTN3-207ENST00000537408 MRGPRG-AS1Q2M3A8 158 aa8.12□□□□□ -1.11
CLSTN3-207ENST00000537408 TRAV21A0A0B4J279 112 aa8.12□□□□□ -1.11
CLSTN3-207ENST00000537408 S100A7L2Q5SY68 101 aa8.12□□□□□ -1.11
CLSTN3-207ENST00000537408 DGAT2L7PQ6IED9 249 aa8.11□□□□□ -1.11
CLSTN3-207ENST00000537408 IGHV3-30-3P0DP02 117 aa8.11□□□□□ -1.11
CLSTN3-207ENST00000537408 MRPS36P82909 103 aaKnown RBP8.11□□□□□ -1.11
CLSTN3-207ENST00000537408 OVOL2Q9BRP0 275 aa8.11□□□□□ -1.11
CLSTN3-207ENST00000537408 ARFGEF3Q5TH69 2177 aa8.1□□□□□ -1.11
CLSTN3-207ENST00000537408 IGHV3-11P01762 117 aa8.1□□□□□ -1.11
CLSTN3-207ENST00000537408 AKAP13Q12802 2813 aa8.1□□□□□ -1.11
CLSTN3-207ENST00000537408 GHRHP01286 108 aa8.1□□□□□ -1.11
CLSTN3-207ENST00000537408 VSIG2Q96IQ7 327 aa8.1□□□□□ -1.11
CLSTN3-207ENST00000537408 A0A0U1RQV1 116 aa8.09□□□□□ -1.11
CLSTN3-207ENST00000537408 MRPL53Q96EL3 112 aaKnown RBP8.09□□□□□ -1.11
CLSTN3-207ENST00000537408 WDFY3Q8IZQ1 3526 aa8.09□□□□□ -1.11
CLSTN3-207ENST00000537408 LAMA1P25391 3075 aa8.09□□□□□ -1.11
CLSTN3-207ENST00000537408 A0A1W2PPR1 153 aa8.09□□□□□ -1.11
CLSTN3-207ENST00000537408 MED14OSP0DP75 135 aa8.09□□□□□ -1.11
CLSTN3-207ENST00000537408 C15orf32Q32M92 178 aa8.09□□□□□ -1.11
CLSTN3-207ENST00000537408 SMR3AQ99954 134 aa8.09□□□□□ -1.11
CLSTN3-207ENST00000537408 A0A0J9YXV3 536 aa8.09□□□□□ -1.11
CLSTN3-207ENST00000537408 LY6LH3BQJ8 138 aa8.09□□□□□ -1.11
CLSTN3-207ENST00000537408 IGKV3-20P01619 116 aa8.09□□□□□ -1.11
CLSTN3-207ENST00000537408 DEFB104AQ8WTQ1 72 aa8.09□□□□□ -1.11
CLSTN3-207ENST00000537408 MOB4Q9Y3A3 225 aa8.09□□□□□ -1.11
CLSTN3-207ENST00000537408 SMAD5-AS1Q9Y6J3 95 aa8.09□□□□□ -1.11
CLSTN3-207ENST00000537408 LMO4P61968 165 aa8.09□□□□□ -1.12
CLSTN3-207ENST00000537408 BUB3O43684 328 aa8.08□□□□□ -1.12
CLSTN3-207ENST00000537408 FHL2Q14192 279 aa8.08□□□□□ -1.12
CLSTN3-207ENST00000537408 C20orf197Q8N268 126 aa8.08□□□□□ -1.12
CLSTN3-207ENST00000537408 Q6ZSV7 163 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms