RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 LOC285556D6RIA3 1793 aa0.91□□□□□ -2.26
VBP1-203ENST00000535916 RPL37P61927 97 aaKnown RBP0.91□□□□□ -2.26
VBP1-203ENST00000535916 C10orf128Q5T292 105 aa0.91□□□□□ -2.26
VBP1-203ENST00000535916 SNHG12Q9BXW3 62 aa0.91□□□□□ -2.26
VBP1-203ENST00000535916 LENEPQ9Y5L5 61 aa0.91□□□□□ -2.26
VBP1-203ENST00000535916 V9GYV3 84 aa0.91□□□□□ -2.26
VBP1-203ENST00000535916 ARFGEF1Q9Y6D6 1849 aa0.91□□□□□ -2.26
VBP1-203ENST00000535916 COL6A6A6NMZ7 2263 aa0.91□□□□□ -2.26
VBP1-203ENST00000535916 ADGRL2O95490 1459 aa0.91□□□□□ -2.26
VBP1-203ENST00000535916 RAPGEF2Q9Y4G8 1499 aa0.91□□□□□ -2.26
VBP1-203ENST00000535916 DLG5Q8TDM6 1919 aa0.91□□□□□ -2.26
VBP1-203ENST00000535916 DIP2CQ9Y2E4 1556 aa0.91□□□□□ -2.26
VBP1-203ENST00000535916 TRBV7-3A0A075B6L6 115 aa0.9□□□□□ -2.27
VBP1-203ENST00000535916 FAM213BQ8TBF2 198 aa0.9□□□□□ -2.27
VBP1-203ENST00000535916 MYOZ3Q8TDC0 251 aa0.9□□□□□ -2.27
VBP1-203ENST00000535916 NDUFA4L2Q9NRX3 87 aa0.9□□□□□ -2.27
VBP1-203ENST00000535916 MAGI1Q96QZ7 1491 aaPredicted RBP0.9□□□□□ -2.27
VBP1-203ENST00000535916 PRDM15P57071 1507 aaPredicted RBP0.89□□□□□ -2.27
VBP1-203ENST00000535916 CITO14578 2027 aa0.89□□□□□ -2.27
VBP1-203ENST00000535916 CHD3Q12873 2000 aaKnown RBP0.89□□□□□ -2.27
VBP1-203ENST00000535916 GOLGA3Q08378 1498 aa0.89□□□□□ -2.27
VBP1-203ENST00000535916 MT-ATP8P03928 68 aa0.89□□□□□ -2.27
VBP1-203ENST00000535916 SNCAP37840 140 aa0.89□□□□□ -2.27
VBP1-203ENST00000535916 CCL18P55774 89 aa0.89□□□□□ -2.27
VBP1-203ENST00000535916 SPINK13Q1W4C9 94 aa0.89□□□□□ -2.27
VBP1-203ENST00000535916 Q5VV11 94 aa0.89□□□□□ -2.27
VBP1-203ENST00000535916 MGST2Q99735 147 aa0.89□□□□□ -2.27
VBP1-203ENST00000535916 WFDC6Q9BQY6 131 aa0.89□□□□□ -2.27
VBP1-203ENST00000535916 TOP2BQ02880 1626 aa0.89□□□□□ -2.27
VBP1-203ENST00000535916 SCRIBQ14160 1630 aa0.89□□□□□ -2.27
VBP1-203ENST00000535916 SSC5DA1L4H1 1573 aa0.88□□□□□ -2.27
VBP1-203ENST00000535916 RB1CC1Q8TDY2 1594 aa0.88□□□□□ -2.27
VBP1-203ENST00000535916 MYH8P13535 1937 aa0.88□□□□□ -2.27
VBP1-203ENST00000535916 PPP1R17O96001 155 aa0.88□□□□□ -2.27
VBP1-203ENST00000535916 UBE2D3P61077 147 aa0.88□□□□□ -2.27
VBP1-203ENST00000535916 UBE2D2P62837 147 aa0.88□□□□□ -2.27
VBP1-203ENST00000535916 COL5A1-AS1Q5SY13 56 aa0.88□□□□□ -2.27
VBP1-203ENST00000535916 FAM167A-AS1Q96KT0 104 aa0.88□□□□□ -2.27
VBP1-203ENST00000535916 IFT172Q9UG01 1749 aa0.88□□□□□ -2.27
VBP1-203ENST00000535916 CDK13Q14004 1512 aaKnown RBP0.88□□□□□ -2.27
VBP1-203ENST00000535916 LAMA4Q16363 1823 aa0.87□□□□□ -2.27
VBP1-203ENST00000535916 DOCK2Q92608 1830 aa0.87□□□□□ -2.27
VBP1-203ENST00000535916 ANKRD36BQ8N2N9 1353 aa0.87□□□□□ -2.27
VBP1-203ENST00000535916 hADV29S1A0JD25 119 aa0.87□□□□□ -2.27
VBP1-203ENST00000535916 NAP1L6A6NFF2 107 aa0.87□□□□□ -2.27
VBP1-203ENST00000535916 GNG11P61952 73 aa0.87□□□□□ -2.27
VBP1-203ENST00000535916 Q0VG73 95 aa0.87□□□□□ -2.27
VBP1-203ENST00000535916 DYNLRB1Q9NP97 96 aa0.87□□□□□ -2.27
VBP1-203ENST00000535916 CDC42SE2Q9NRR3 84 aa0.87□□□□□ -2.27
VBP1-203ENST00000535916 ZMYM4Q5VZL5 1548 aa0.87□□□□□ -2.27
VBP1-203ENST00000535916 EHBP1L1Q8N3D4 1523 aa0.87□□□□□ -2.27
VBP1-203ENST00000535916 ZGRF1Q86YA3 2104 aa0.86□□□□□ -2.27
VBP1-203ENST00000535916 COL4A6Q14031 1691 aa0.86□□□□□ -2.27
VBP1-203ENST00000535916 GVQW2A0A096LPI5 108 aaPredicted RBP0.86□□□□□ -2.27
VBP1-203ENST00000535916 TRGV1A0A0A0MS02 117 aa0.86□□□□□ -2.27
VBP1-203ENST00000535916 TRAV22A0A0B4J277 110 aa0.86□□□□□ -2.27
VBP1-203ENST00000535916 HMGN4O00479 90 aa0.86□□□□□ -2.27
VBP1-203ENST00000535916 SPINT3P49223 89 aa0.86□□□□□ -2.27
VBP1-203ENST00000535916 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.86□□□□□ -2.27
VBP1-203ENST00000535916 AMELXQ99217 191 aa0.86□□□□□ -2.27
VBP1-203ENST00000535916 DPY30Q9C005 99 aa0.86□□□□□ -2.27
VBP1-203ENST00000535916 HMGXB3Q12766 1538 aa0.85□□□□□ -2.27
VBP1-203ENST00000535916 KDM5AP29375 1690 aaKnown RBP0.85□□□□□ -2.27
VBP1-203ENST00000535916 TRAV1-2A0A0B4J238 106 aa0.85□□□□□ -2.27
VBP1-203ENST00000535916 LINC00032P0C843 101 aa0.85□□□□□ -2.27
VBP1-203ENST00000535916 ACYP2P14621 99 aa0.85□□□□□ -2.27
VBP1-203ENST00000535916 SPAG11BQ08648 103 aa0.85□□□□□ -2.27
VBP1-203ENST00000535916 SPAG11AQ6PDA7 123 aa0.85□□□□□ -2.27
VBP1-203ENST00000535916 SMIM11BQ8TCY0 68 aa0.85□□□□□ -2.27
VBP1-203ENST00000535916 BPESC1Q9GZL8 116 aa0.85□□□□□ -2.27
VBP1-203ENST00000535916 MARF1Q9Y4F3 1742 aaKnown RBP0.85□□□□□ -2.27
VBP1-203ENST00000535916 AP4S1Q9Y587 144 aa0.85□□□□□ -2.27
VBP1-203ENST00000535916 V9GYH0 126 aa0.85□□□□□ -2.27
VBP1-203ENST00000535916 SCN7AQ01118 1682 aa0.84□□□□□ -2.27
VBP1-203ENST00000535916 NINQ8N4C6 2090 aa0.84□□□□□ -2.27
VBP1-203ENST00000535916 NSD3Q9BZ95 1437 aa0.84□□□□□ -2.27
VBP1-203ENST00000535916 CRYM-AS1A6NIL9 109 aa0.84□□□□□ -2.27
VBP1-203ENST00000535916 GNGT2O14610 69 aa0.84□□□□□ -2.27
VBP1-203ENST00000535916 KRTDAPP60985 99 aa0.84□□□□□ -2.27
VBP1-203ENST00000535916 UBA52P62987 128 aaKnown RBP0.84□□□□□ -2.27
VBP1-203ENST00000535916 VMO1Q7Z5L0 202 aa0.84□□□□□ -2.27
VBP1-203ENST00000535916 SCP2D1Q9UJQ7 156 aa0.84□□□□□ -2.27
VBP1-203ENST00000535916 R4GMQ9 66 aa0.84□□□□□ -2.27
VBP1-203ENST00000535916 TECTAO75443 2155 aa0.84□□□□□ -2.28
VBP1-203ENST00000535916 KIF21AQ7Z4S6 1674 aa0.84□□□□□ -2.28
VBP1-203ENST00000535916 TANC1Q9C0D5 1861 aa0.84□□□□□ -2.28
VBP1-203ENST00000535916 ARHGEF12Q9NZN5 1544 aa0.84□□□□□ -2.28
VBP1-203ENST00000535916 TMEM14DPA8MWL7 114 aa0.83□□□□□ -2.28
VBP1-203ENST00000535916 CHKB-CPT1BH3BT56 60 aa0.83□□□□□ -2.28
VBP1-203ENST00000535916 M0R135 149 aa0.83□□□□□ -2.28
VBP1-203ENST00000535916 ZNF137PP52743 207 aa0.83□□□□□ -2.28
VBP1-203ENST00000535916 GNG2P59768 71 aa0.83□□□□□ -2.28
VBP1-203ENST00000535916 SEC11AP67812 179 aa0.83□□□□□ -2.28
VBP1-203ENST00000535916 C6orf52Q5T4I8 152 aa0.83□□□□□ -2.28
VBP1-203ENST00000535916 BAGE3Q86Y29 109 aa0.83□□□□□ -2.28
VBP1-203ENST00000535916 PMCHL2Q9BQD1 86 aa0.83□□□□□ -2.28
VBP1-203ENST00000535916 UQCR10Q9UDW1 63 aa0.83□□□□□ -2.28
VBP1-203ENST00000535916 PRO1854Q9UHT4 67 aa0.83□□□□□ -2.28
VBP1-203ENST00000535916 CNTRLQ7Z7A1 2325 aa0.83□□□□□ -2.28
VBP1-203ENST00000535916 BAZ1AQ9NRL2 1556 aaPredicted RBP0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms