RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 UBE2D3P61077 147 aa4.57□□□□□ -1.68
CDCA3-205ENST00000535871 SSTP61278 116 aa4.57□□□□□ -1.68
CDCA3-205ENST00000535871 PKIAP61925 76 aa4.57□□□□□ -1.68
CDCA3-205ENST00000535871 UBE2D2P62837 147 aa4.57□□□□□ -1.68
CDCA3-205ENST00000535871 LAGE3Q14657 143 aa4.57□□□□□ -1.68
CDCA3-205ENST00000535871 MRPL23Q16540 153 aaKnown RBP4.57□□□□□ -1.68
CDCA3-205ENST00000535871 C12orf74Q32Q52 190 aa4.57□□□□□ -1.68
CDCA3-205ENST00000535871 NIT1Q86X76 327 aa4.57□□□□□ -1.68
CDCA3-205ENST00000535871 C15orf53Q8NAA6 179 aa4.57□□□□□ -1.68
CDCA3-205ENST00000535871 NEXN-AS1Q8NBZ9 246 aa4.57□□□□□ -1.68
CDCA3-205ENST00000535871 C11orf45Q8TAV5 145 aa4.57□□□□□ -1.68
CDCA3-205ENST00000535871 TRAV10A0A0B4J240 114 aa4.56□□□□□ -1.68
CDCA3-205ENST00000535871 TRAV26-2A0A0B4J265 109 aa4.56□□□□□ -1.68
CDCA3-205ENST00000535871 A0A0J9YWU9 116 aa4.56□□□□□ -1.68
CDCA3-205ENST00000535871 PRYO14603 147 aa4.56□□□□□ -1.68
CDCA3-205ENST00000535871 PAX4O43316 350 aa4.56□□□□□ -1.68
CDCA3-205ENST00000535871 SERF1AO75920 110 aa4.56□□□□□ -1.68
CDCA3-205ENST00000535871 HBDP02042 147 aa4.56□□□□□ -1.68
CDCA3-205ENST00000535871 S100A2P29034 98 aa4.56□□□□□ -1.68
CDCA3-205ENST00000535871 FCER1GP30273 86 aa4.56□□□□□ -1.68
CDCA3-205ENST00000535871 IFI27P40305 119 aaPredicted RBP4.56□□□□□ -1.68
CDCA3-205ENST00000535871 NDUFA6P56556 154 aa4.56□□□□□ -1.68
CDCA3-205ENST00000535871 DEFA6Q01524 100 aa4.56□□□□□ -1.68
CDCA3-205ENST00000535871 COTL1Q14019 142 aa4.56□□□□□ -1.68
CDCA3-205ENST00000535871 PAPPA-AS1Q5QFB9 102 aa4.56□□□□□ -1.68
CDCA3-205ENST00000535871 Q6ZSN1 163 aa4.56□□□□□ -1.68
CDCA3-205ENST00000535871 HIST3H2BBQ8N257 126 aa4.56□□□□□ -1.68
CDCA3-205ENST00000535871 TIMM21Q9BVV7 248 aa4.56□□□□□ -1.68
CDCA3-205ENST00000535871 HSPB8Q9UJY1 196 aa4.56□□□□□ -1.68
CDCA3-205ENST00000535871 CELA1Q9UNI1 258 aa4.56□□□□□ -1.68
CDCA3-205ENST00000535871 PYGO1Q9Y3Y4 419 aa4.56□□□□□ -1.68
CDCA3-205ENST00000535871 CSDC2Q9Y534 153 aaKnown RBP4.56□□□□□ -1.68
CDCA3-205ENST00000535871 SMKR1H3BMG3 65 aa4.55□□□□□ -1.68
CDCA3-205ENST00000535871 ATP5LO75964 103 aa4.55□□□□□ -1.68
CDCA3-205ENST00000535871 PRB2P02812 416 aaPredicted RBP4.55□□□□□ -1.68
CDCA3-205ENST00000535871 SNRPEP62304 92 aaKnown RBP4.55□□□□□ -1.68
CDCA3-205ENST00000535871 IQCJQ1A5X6 159 aa4.55□□□□□ -1.68
CDCA3-205ENST00000535871 SPATA12Q7Z6I5 190 aa4.55□□□□□ -1.68
CDCA3-205ENST00000535871 RPL39LQ96EH5 51 aaKnown RBP4.55□□□□□ -1.68
CDCA3-205ENST00000535871 URB1-AS1Q96HZ7 61 aa4.55□□□□□ -1.68
CDCA3-205ENST00000535871 TIMM17AQ99595 171 aa4.55□□□□□ -1.68
CDCA3-205ENST00000535871 RETNQ9HD89 108 aa4.55□□□□□ -1.68
CDCA3-205ENST00000535871 MEGF8Q7Z7M0 2845 aa4.55□□□□□ -1.68
CDCA3-205ENST00000535871 GAS8-AS1O95177 125 aa4.54□□□□□ -1.68
CDCA3-205ENST00000535871 TSHBP01222 138 aa4.54□□□□□ -1.68
CDCA3-205ENST00000535871 ZNF25P17030 456 aaPredicted RBP4.54□□□□□ -1.68
CDCA3-205ENST00000535871 AMTP48728 403 aa4.54□□□□□ -1.68
CDCA3-205ENST00000535871 PDZD11Q5EBL8 140 aa4.54□□□□□ -1.68
CDCA3-205ENST00000535871 RNASEKQ6P5S7 137 aaKnown RBP4.54□□□□□ -1.68
CDCA3-205ENST00000535871 NEGR1Q7Z3B1 354 aa4.54□□□□□ -1.68
CDCA3-205ENST00000535871 ERASQ7Z444 233 aa4.54□□□□□ -1.68
CDCA3-205ENST00000535871 MRPL52Q86TS9 123 aaKnown RBP4.54□□□□□ -1.68
CDCA3-205ENST00000535871 C20orf203Q8NBC4 194 aa4.54□□□□□ -1.68
CDCA3-205ENST00000535871 ATP6V0E2Q8NHE4 81 aa4.54□□□□□ -1.68
CDCA3-205ENST00000535871 ZNRF2Q8NHG8 242 aa4.54□□□□□ -1.68
CDCA3-205ENST00000535871 TOMM6Q96B49 74 aa4.54□□□□□ -1.68
CDCA3-205ENST00000535871 TMEM141Q96I45 108 aa4.54□□□□□ -1.68
CDCA3-205ENST00000535871 VSIG2Q96IQ7 327 aa4.54□□□□□ -1.68
CDCA3-205ENST00000535871 HIST1H2BLQ99880 126 aa4.54□□□□□ -1.68
CDCA3-205ENST00000535871 CHCHD7Q9BUK0 85 aa4.54□□□□□ -1.68
CDCA3-205ENST00000535871 SPANXA1Q9NS26 97 aa4.54□□□□□ -1.68
CDCA3-205ENST00000535871 CYSLTR1Q9Y271 337 aa4.54□□□□□ -1.68
CDCA3-205ENST00000535871 ICOSQ9Y6W8 199 aa4.54□□□□□ -1.68
CDCA3-205ENST00000535871 TRBV25-1A0A075B6N4 114 aa4.53□□□□□ -1.68
CDCA3-205ENST00000535871 A0A096LNJ9 63 aa4.53□□□□□ -1.68
CDCA3-205ENST00000535871 DEFB131BA0A096LNP1 70 aa4.53□□□□□ -1.68
CDCA3-205ENST00000535871 TRBV6-8A0A0A6YYG3 113 aa4.53□□□□□ -1.68
CDCA3-205ENST00000535871 IGHV3-73A0A0B4J1V6 119 aa4.53□□□□□ -1.68
CDCA3-205ENST00000535871 IGHV1-24A0A0C4DH33 117 aa4.53□□□□□ -1.68
CDCA3-205ENST00000535871 LOC389332A0A1B0GUA5 103 aa4.53□□□□□ -1.68
CDCA3-205ENST00000535871 A0A1B0GUV1 79 aa4.53□□□□□ -1.68
CDCA3-205ENST00000535871 F5H768 121 aa4.53□□□□□ -1.68
CDCA3-205ENST00000535871 K7EP13 123 aa4.53□□□□□ -1.68
CDCA3-205ENST00000535871 DEFB4AO15263 64 aa4.53□□□□□ -1.68
CDCA3-205ENST00000535871 LEPROTL1O95214 131 aa4.53□□□□□ -1.68
CDCA3-205ENST00000535871 NUDT3O95989 172 aa4.53□□□□□ -1.68
CDCA3-205ENST00000535871 MRPS36P82909 103 aaKnown RBP4.53□□□□□ -1.68
CDCA3-205ENST00000535871 Q6ZTC4 211 aa4.53□□□□□ -1.68
CDCA3-205ENST00000535871 COL7A1Q02388 2944 aa4.52□□□□□ -1.69
CDCA3-205ENST00000535871 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
CDCA3-205ENST00000535871 NUPR2A6NF83 97 aa4.52□□□□□ -1.69
CDCA3-205ENST00000535871 IGIPA6NJ69 53 aa4.52□□□□□ -1.69
CDCA3-205ENST00000535871 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.52□□□□□ -1.69
CDCA3-205ENST00000535871 CCL25O15444 150 aa4.52□□□□□ -1.69
CDCA3-205ENST00000535871 NUPR1O60356 82 aa4.52□□□□□ -1.69
CDCA3-205ENST00000535871 LELP1Q5T871 98 aa4.52□□□□□ -1.69
CDCA3-205ENST00000535871 C2orf66Q6UXQ4 117 aa4.52□□□□□ -1.69
CDCA3-205ENST00000535871 TMEM243Q9BU79 118 aa4.52□□□□□ -1.69
CDCA3-205ENST00000535871 FBN3Q75N90 2809 aa4.52□□□□□ -1.69
CDCA3-205ENST00000535871 A0A096LPF7 62 aa4.51□□□□□ -1.69
CDCA3-205ENST00000535871 TRAV12-1A0A0B4J245 112 aa4.51□□□□□ -1.69
CDCA3-205ENST00000535871 GAGE12JA6NER3 117 aa4.51□□□□□ -1.69
CDCA3-205ENST00000535871 IFITM10A6NMD0 228 aa4.51□□□□□ -1.69
CDCA3-205ENST00000535871 P0DMU3 169 aa4.51□□□□□ -1.69
CDCA3-205ENST00000535871 FAM231AP0DMU4 169 aa4.51□□□□□ -1.69
CDCA3-205ENST00000535871 FAM231CP0DMU5 169 aa4.51□□□□□ -1.69
CDCA3-205ENST00000535871 NANOS2P60321 138 aaKnown RBP4.51□□□□□ -1.69
CDCA3-205ENST00000535871 GAGE1Q13065 139 aa4.51□□□□□ -1.69
CDCA3-205ENST00000535871 GAGE4Q13068 117 aa4.51□□□□□ -1.69
CDCA3-205ENST00000535871 GAGE5Q13069 117 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms