RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 IGKV3OR2-268A0A0C4DH90 116 aa8.57□□□□□ -1.04
CLSTN3-205ENST00000535452 RAB19A4D1S5 217 aa8.57□□□□□ -1.04
CLSTN3-205ENST00000535452 BCL2P10415 239 aa8.57□□□□□ -1.04
CLSTN3-205ENST00000535452 RNASEKQ6P5S7 137 aaKnown RBP8.57□□□□□ -1.04
CLSTN3-205ENST00000535452 TMEM101Q96IK0 257 aa8.57□□□□□ -1.04
CLSTN3-205ENST00000535452 HERC1Q15751 4861 aa8.56□□□□□ -1.04
CLSTN3-205ENST00000535452 C19orf71A6NCJ1 209 aa8.56□□□□□ -1.04
CLSTN3-205ENST00000535452 APCSP02743 223 aa8.56□□□□□ -1.04
CLSTN3-205ENST00000535452 CNBPP62633 177 aaKnown RBP8.56□□□□□ -1.04
CLSTN3-205ENST00000535452 SLC51BQ86UW2 128 aa8.56□□□□□ -1.04
CLSTN3-205ENST00000535452 C9orf62Q8N4C0 152 aa8.56□□□□□ -1.04
CLSTN3-205ENST00000535452 RNF185Q96GF1 192 aa8.56□□□□□ -1.04
CLSTN3-205ENST00000535452 RPP21Q9H633 154 aaKnown RBP8.56□□□□□ -1.04
CLSTN3-205ENST00000535452 PLA2G2DQ9UNK4 145 aa8.56□□□□□ -1.04
CLSTN3-205ENST00000535452 VPS13BQ7Z7G8 4022 aa8.56□□□□□ -1.04
CLSTN3-205ENST00000535452 NCR2O95944 276 aa8.55□□□□□ -1.04
CLSTN3-205ENST00000535452 C20orf203Q8NBC4 194 aa8.55□□□□□ -1.04
CLSTN3-205ENST00000535452 NUDT10Q8NFP7 164 aa8.54□□□□□ -1.04
CLSTN3-205ENST00000535452 NUDT11Q96G61 164 aa8.54□□□□□ -1.04
CLSTN3-205ENST00000535452 GAGE12HA6NDE8 117 aa8.53□□□□□ -1.04
CLSTN3-205ENST00000535452 H7C423 109 aa8.53□□□□□ -1.04
CLSTN3-205ENST00000535452 CTRLP40313 264 aa8.53□□□□□ -1.04
CLSTN3-205ENST00000535452 SMAGPQ0VAQ4 97 aa8.53□□□□□ -1.04
CLSTN3-205ENST00000535452 IGLV4-60A0A075B6I1 120 aa8.52□□□□□ -1.05
CLSTN3-205ENST00000535452 A8MWL6 223 aa8.52□□□□□ -1.05
CLSTN3-205ENST00000535452 GATCO43716 136 aaKnown RBP8.52□□□□□ -1.05
CLSTN3-205ENST00000535452 PMCHP20382 165 aa8.52□□□□□ -1.05
CLSTN3-205ENST00000535452 RPS10P46783 165 aaKnown RBP8.52□□□□□ -1.05
CLSTN3-205ENST00000535452 SDIM1Q6ZPB5 146 aa8.52□□□□□ -1.05
CLSTN3-205ENST00000535452 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.52□□□□□ -1.05
CLSTN3-205ENST00000535452 MYCBP2O75592 4640 aa8.52□□□□□ -1.05
CLSTN3-205ENST00000535452 ZNF25P17030 456 aaPredicted RBP8.51□□□□□ -1.05
CLSTN3-205ENST00000535452 CEBPGP53567 150 aa8.51□□□□□ -1.05
CLSTN3-205ENST00000535452 BLOC1S1P78537 153 aa8.51□□□□□ -1.05
CLSTN3-205ENST00000535452 Q6ZRU5 148 aa8.51□□□□□ -1.05
CLSTN3-205ENST00000535452 FAM210AQ96ND0 272 aa8.51□□□□□ -1.05
CLSTN3-205ENST00000535452 LINC00474Q9P2X8 69 aa8.51□□□□□ -1.05
CLSTN3-205ENST00000535452 DNAH8Q96JB1 4490 aa8.5□□□□□ -1.05
CLSTN3-205ENST00000535452 I3L3M4 83 aa8.5□□□□□ -1.05
CLSTN3-205ENST00000535452 NDUFS6O75380 124 aaKnown RBP8.5□□□□□ -1.05
CLSTN3-205ENST00000535452 OR5A1Q8NGJ0 315 aa8.5□□□□□ -1.05
CLSTN3-205ENST00000535452 GTSF1Q8WW33 167 aa8.5□□□□□ -1.05
CLSTN3-205ENST00000535452 MRAP2Q96G30 205 aa8.5□□□□□ -1.05
CLSTN3-205ENST00000535452 RNASE7Q9H1E1 156 aaKnown RBP8.5□□□□□ -1.05
CLSTN3-205ENST00000535452 SDHAF1A6NFY7 115 aa8.49□□□□□ -1.05
CLSTN3-205ENST00000535452 SS18Q15532 418 aa8.49□□□□□ -1.05
CLSTN3-205ENST00000535452 MAJINQ3KP22 176 aa8.49□□□□□ -1.05
CLSTN3-205ENST00000535452 TCTE3Q8IZS6 198 aa8.49□□□□□ -1.05
CLSTN3-205ENST00000535452 CHCHD10Q8WYQ3 142 aaPredicted RBP8.49□□□□□ -1.05
CLSTN3-205ENST00000535452 CNFNQ9BYD5 112 aa8.49□□□□□ -1.05
CLSTN3-205ENST00000535452 ST20Q9HBF5 79 aa8.49□□□□□ -1.05
CLSTN3-205ENST00000535452 A0A087WYN8 130 aa8.48□□□□□ -1.05
CLSTN3-205ENST00000535452 TRAV26-2A0A0B4J265 109 aa8.48□□□□□ -1.05
CLSTN3-205ENST00000535452 IGKV2-24A0A0C4DH68 120 aa8.48□□□□□ -1.05
CLSTN3-205ENST00000535452 TMEM250H0YL14 139 aa8.48□□□□□ -1.05
CLSTN3-205ENST00000535452 FGF6P10767 208 aa8.48□□□□□ -1.05
CLSTN3-205ENST00000535452 HIGD2BQ4VC39 106 aa8.48□□□□□ -1.05
CLSTN3-205ENST00000535452 KRTAP26-1Q6PEX3 210 aa8.48□□□□□ -1.05
CLSTN3-205ENST00000535452 GATD1Q8NB37 220 aa8.48□□□□□ -1.05
CLSTN3-205ENST00000535452 OCC1Q8TAD7 63 aa8.48□□□□□ -1.05
CLSTN3-205ENST00000535452 TRBV20OR9-2A0A075B6H5 130 aa8.47□□□□□ -1.05
CLSTN3-205ENST00000535452 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.47□□□□□ -1.05
CLSTN3-205ENST00000535452 IGKV2-29A2NJV5 120 aaPredicted RBP8.47□□□□□ -1.05
CLSTN3-205ENST00000535452 ZNF561-AS1K7EIQ3 104 aa8.47□□□□□ -1.05
CLSTN3-205ENST00000535452 PPP1R17O96001 155 aa8.47□□□□□ -1.05
CLSTN3-205ENST00000535452 COX6A2Q02221 97 aa8.47□□□□□ -1.05
CLSTN3-205ENST00000535452 ISOC2Q96AB3 205 aa8.47□□□□□ -1.05
CLSTN3-205ENST00000535452 EIF5A2Q9GZV4 153 aaKnown RBP8.47□□□□□ -1.05
CLSTN3-205ENST00000535452 FCER1GP30273 86 aa8.46□□□□□ -1.06
CLSTN3-205ENST00000535452 XCL1P47992 114 aa8.46□□□□□ -1.06
CLSTN3-205ENST00000535452 KRTAP10-4P60372 401 aaPredicted RBP8.46□□□□□ -1.06
CLSTN3-205ENST00000535452 CIRBPQ14011 172 aaKnown RBP8.46□□□□□ -1.06
CLSTN3-205ENST00000535452 SPACA4Q8TDM5 124 aa8.46□□□□□ -1.06
CLSTN3-205ENST00000535452 RPL39LQ96EH5 51 aaKnown RBP8.46□□□□□ -1.06
CLSTN3-205ENST00000535452 IGHV1-58A0A0C4DH39 117 aa8.45□□□□□ -1.06
CLSTN3-205ENST00000535452 CHTF8P0CG12 524 aa8.45□□□□□ -1.06
CLSTN3-205ENST00000535452 MALP21145 153 aa8.45□□□□□ -1.06
CLSTN3-205ENST00000535452 CT83Q5H943 113 aa8.45□□□□□ -1.06
CLSTN3-205ENST00000535452 Q6ZNX1 250 aa8.45□□□□□ -1.06
CLSTN3-205ENST00000535452 FAM231DQ6ZW35 169 aa8.45□□□□□ -1.06
CLSTN3-205ENST00000535452 GFRA4Q9GZZ7 299 aa8.45□□□□□ -1.06
CLSTN3-205ENST00000535452 GVQW2A0A096LPI5 108 aaPredicted RBP8.44□□□□□ -1.06
CLSTN3-205ENST00000535452 A0A1B0GUT8 65 aa8.44□□□□□ -1.06
CLSTN3-205ENST00000535452 AKAP14Q86UN6 197 aa8.44□□□□□ -1.06
CLSTN3-205ENST00000535452 STPG4Q8N801 248 aa8.44□□□□□ -1.06
CLSTN3-205ENST00000535452 TMEM18Q96B42 140 aa8.44□□□□□ -1.06
CLSTN3-205ENST00000535452 KIR2DL4Q99706 377 aa8.44□□□□□ -1.06
CLSTN3-205ENST00000535452 SMIM7Q9BQ49 75 aa8.44□□□□□ -1.06
CLSTN3-205ENST00000535452 C7orf77A4D0Y5 90 aa8.43□□□□□ -1.06
CLSTN3-205ENST00000535452 K7EN84 100 aa8.43□□□□□ -1.06
CLSTN3-205ENST00000535452 PHOX2AO14813 284 aa8.43□□□□□ -1.06
CLSTN3-205ENST00000535452 RIGQ13278 110 aa8.43□□□□□ -1.06
CLSTN3-205ENST00000535452 C15orf56Q8N910 161 aa8.43□□□□□ -1.06
CLSTN3-205ENST00000535452 CARD19Q96LW7 228 aa8.43□□□□□ -1.06
CLSTN3-205ENST00000535452 PLAC8Q9NZF1 115 aa8.43□□□□□ -1.06
CLSTN3-205ENST00000535452 TRBV6-5A0A0K0K1A5 114 aa8.42□□□□□ -1.06
CLSTN3-205ENST00000535452 ZNF727A8MUV8 499 aa8.42□□□□□ -1.06
CLSTN3-205ENST00000535452 PANO1I0J062 215 aa8.42□□□□□ -1.06
CLSTN3-205ENST00000535452 CCL25O15444 150 aa8.42□□□□□ -1.06
CLSTN3-205ENST00000535452 REG3GQ6UW15 175 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms