RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, human

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-215	ENST00000533440	ZNF726P1	Q15940	193 aa		4.71	□□□□□ -1.66
NXF1-215	ENST00000533440	MZT2B	Q6NZ67	158 aa		4.71	□□□□□ -1.66
NXF1-215	ENST00000533440	FER1L6-AS1	Q8NA97	138 aa		4.71	□□□□□ -1.66
NXF1-215	ENST00000533440	CARD19	Q96LW7	228 aa		4.71	□□□□□ -1.66
NXF1-215	ENST00000533440	AP1S3	Q96PC3	154 aa		4.71	□□□□□ -1.66
NXF1-215	ENST00000533440	CCDC32	Q9BV29	185 aa		4.71	□□□□□ -1.66
NXF1-215	ENST00000533440	FSIP2	Q5CZC0	6907 aa		4.71	□□□□□ -1.66
NXF1-215	ENST00000533440	IGLV1-50	A0A075B6I6	118 aa		4.7	□□□□□ -1.66
NXF1-215	ENST00000533440	IGKV3OR2-268	A0A0C4DH90	116 aa		4.7	□□□□□ -1.66
NXF1-215	ENST00000533440	UBE2L6	O14933	153 aa		4.7	□□□□□ -1.66
NXF1-215	ENST00000533440	MT-ND6	P03923	174 aa		4.7	□□□□□ -1.66
NXF1-215	ENST00000533440	NKX2-5	P52952	324 aa	Predicted RBP	4.7	□□□□□ -1.66
NXF1-215	ENST00000533440	C1orf137	Q5JT78	98 aa		4.7	□□□□□ -1.66
NXF1-215	ENST00000533440	SUMO4	Q6EEV6	95 aa		4.7	□□□□□ -1.66
NXF1-215	ENST00000533440	DIRC1	Q969H9	104 aa		4.7	□□□□□ -1.66
NXF1-215	ENST00000533440	IGHV1-58	A0A0C4DH39	117 aa		4.69	□□□□□ -1.66
NXF1-215	ENST00000533440	CTXND1	A0A1B0GTU2	59 aa		4.69	□□□□□ -1.66
NXF1-215	ENST00000533440	IGLV7-43	P04211	117 aa		4.69	□□□□□ -1.66
NXF1-215	ENST00000533440	KRTAP1-4	P0C5Y4	121 aa		4.69	□□□□□ -1.66
NXF1-215	ENST00000533440	AMT	P48728	403 aa		4.69	□□□□□ -1.66
NXF1-215	ENST00000533440	DEFA3	P59666	94 aa		4.69	□□□□□ -1.66
NXF1-215	ENST00000533440	SST	P61278	116 aa		4.69	□□□□□ -1.66
NXF1-215	ENST00000533440	RASL11A	Q6T310	242 aa		4.69	□□□□□ -1.66
NXF1-215	ENST00000533440	LINC00526	Q96FQ7	95 aa		4.69	□□□□□ -1.66
NXF1-215	ENST00000533440	TCEAL7	Q9BRU2	100 aa		4.69	□□□□□ -1.66
NXF1-215	ENST00000533440	MLST8	Q9BVC4	326 aa		4.69	□□□□□ -1.66
NXF1-215	ENST00000533440	LOC107984640	A0A0U1RRK4	108 aa		4.68	□□□□□ -1.66
NXF1-215	ENST00000533440	INMT-MINDY4	F8WBC2	141 aa		4.68	□□□□□ -1.66
NXF1-215	ENST00000533440		H0Y9J4	135 aa		4.68	□□□□□ -1.66
NXF1-215	ENST00000533440	MGP	P08493	103 aa		4.68	□□□□□ -1.66
NXF1-215	ENST00000533440	FHIT	P49789	147 aa		4.68	□□□□□ -1.66
NXF1-215	ENST00000533440	SYCN	Q0VAF6	134 aa		4.68	□□□□□ -1.66
NXF1-215	ENST00000533440	GAGE2B	Q13066	116 aa		4.68	□□□□□ -1.66
NXF1-215	ENST00000533440	COTL1	Q14019	142 aa		4.68	□□□□□ -1.66
NXF1-215	ENST00000533440	C9orf116	Q5BN46	136 aa	Predicted RBP	4.68	□□□□□ -1.66
NXF1-215	ENST00000533440	ENKUR	Q8TC29	256 aa		4.68	□□□□□ -1.66
NXF1-215	ENST00000533440	NIT2	Q9NQR4	276 aa		4.68	□□□□□ -1.66
NXF1-215	ENST00000533440	AKR1C3	P42330	323 aa		4.67	□□□□□ -1.66
NXF1-215	ENST00000533440	PHF5A	Q7RTV0	110 aa	Known RBP	4.67	□□□□□ -1.66
NXF1-215	ENST00000533440	CRCT1	Q9UGL9	99 aa		4.67	□□□□□ -1.66
NXF1-215	ENST00000533440		H7C423	109 aa		4.66	□□□□□ -1.66
NXF1-215	ENST00000533440	ZNF561-AS1	K7EIQ3	104 aa		4.66	□□□□□ -1.66
NXF1-215	ENST00000533440	SSNA1	O43805	119 aa		4.66	□□□□□ -1.66
NXF1-215	ENST00000533440	S100A9	P06702	114 aa	Known RBP	4.66	□□□□□ -1.66
NXF1-215	ENST00000533440	IGLC6	P0CF74	106 aa		4.66	□□□□□ -1.66
NXF1-215	ENST00000533440	FGF6	P10767	208 aa		4.66	□□□□□ -1.66
NXF1-215	ENST00000533440	XCL1	P47992	114 aa		4.66	□□□□□ -1.66
NXF1-215	ENST00000533440	OR5A1	Q8NGJ0	315 aa		4.66	□□□□□ -1.66
NXF1-215	ENST00000533440	MARVELD1	Q9BSK0	173 aa		4.66	□□□□□ -1.66
NXF1-215	ENST00000533440	NDUFA13	Q9P0J0	144 aa		4.66	□□□□□ -1.66
NXF1-215	ENST00000533440	TRAV1-1	A0A0B4J248	108 aa		4.65	□□□□□ -1.67
NXF1-215	ENST00000533440	LINC00959	A0A1B0GUT2	108 aa		4.65	□□□□□ -1.67
NXF1-215	ENST00000533440	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.65	□□□□□ -1.67
NXF1-215	ENST00000533440	CCL25	O15444	150 aa		4.65	□□□□□ -1.67
NXF1-215	ENST00000533440	BCL2	P10415	239 aa		4.65	□□□□□ -1.67
NXF1-215	ENST00000533440	NTF3	P20783	257 aa		4.65	□□□□□ -1.67
NXF1-215	ENST00000533440	RPL13A	P40429	203 aa	Known RBP	4.65	□□□□□ -1.67
NXF1-215	ENST00000533440	CAMP	P49913	170 aa		4.65	□□□□□ -1.67
NXF1-215	ENST00000533440	MEF2B	Q02080	365 aa	Predicted RBP	4.65	□□□□□ -1.67
NXF1-215	ENST00000533440	CST9LP1	Q5W188	147 aa		4.65	□□□□□ -1.67
NXF1-215	ENST00000533440	AMMECR1L	Q6DCA0	310 aa		4.65	□□□□□ -1.67
NXF1-215	ENST00000533440	BAGE2	Q86Y30	109 aa		4.65	□□□□□ -1.67
NXF1-215	ENST00000533440	NUP35	Q8NFH5	326 aa		4.65	□□□□□ -1.67
NXF1-215	ENST00000533440	STOML3	Q8TAV4	291 aa		4.65	□□□□□ -1.67
NXF1-215	ENST00000533440	ISOC2	Q96AB3	205 aa		4.65	□□□□□ -1.67
NXF1-215	ENST00000533440	IGLV4-69	A0A075B6H9	119 aa		4.64	□□□□□ -1.67
NXF1-215	ENST00000533440	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.64	□□□□□ -1.67
NXF1-215	ENST00000533440	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.64	□□□□□ -1.67
NXF1-215	ENST00000533440	MAP1LC3B2	A6NCE7	125 aa		4.64	□□□□□ -1.67
NXF1-215	ENST00000533440	APOM	O95445	188 aa		4.64	□□□□□ -1.67
NXF1-215	ENST00000533440	NCR2	O95944	276 aa		4.64	□□□□□ -1.67
NXF1-215	ENST00000533440	ZNF25	P17030	456 aa	Predicted RBP	4.64	□□□□□ -1.67
NXF1-215	ENST00000533440	UBE2D1	P51668	147 aa		4.64	□□□□□ -1.67
NXF1-215	ENST00000533440	RPL7L1	Q6DKI1	246 aa	Known RBP	4.64	□□□□□ -1.67
NXF1-215	ENST00000533440	RNASEK	Q6P5S7	137 aa	Known RBP	4.64	□□□□□ -1.67
NXF1-215	ENST00000533440	CD164L2	Q6UWJ8	174 aa		4.64	□□□□□ -1.67
NXF1-215	ENST00000533440		Q6ZNX1	250 aa		4.64	□□□□□ -1.67
NXF1-215	ENST00000533440	KRTAP11-1	Q8IUC1	163 aa		4.64	□□□□□ -1.67
NXF1-215	ENST00000533440	MAP1LC3B	Q9GZQ8	125 aa		4.64	□□□□□ -1.67
NXF1-215	ENST00000533440	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.64	□□□□□ -1.67
NXF1-215	ENST00000533440		A0A087WZ39	114 aa		4.63	□□□□□ -1.67
NXF1-215	ENST00000533440	TRGC1	P0CF51	173 aa		4.63	□□□□□ -1.67
NXF1-215	ENST00000533440	EIF5A	P63241	154 aa	Known RBP	4.63	□□□□□ -1.67
NXF1-215	ENST00000533440	SRSF3	P84103	164 aa	Known RBP	4.63	□□□□□ -1.67
NXF1-215	ENST00000533440	LINC00299	Q6ZSB3	139 aa		4.63	□□□□□ -1.67
NXF1-215	ENST00000533440	TPPP3	Q9BW30	176 aa		4.63	□□□□□ -1.67
NXF1-215	ENST00000533440	PAGE4	O60829	102 aa		4.62	□□□□□ -1.67
NXF1-215	ENST00000533440	UPK1B	O75841	260 aa		4.62	□□□□□ -1.67
NXF1-215	ENST00000533440	APCS	P02743	223 aa		4.62	□□□□□ -1.67
NXF1-215	ENST00000533440	IFITM3	Q01628	133 aa		4.62	□□□□□ -1.67
NXF1-215	ENST00000533440	AKR1C8P	Q5T2L2	129 aa		4.62	□□□□□ -1.67
NXF1-215	ENST00000533440	GATD1	Q8NB37	220 aa		4.62	□□□□□ -1.67
NXF1-215	ENST00000533440	TSKU	Q8WUA8	353 aa		4.62	□□□□□ -1.67
NXF1-215	ENST00000533440	S100Z	Q8WXG8	99 aa		4.62	□□□□□ -1.67
NXF1-215	ENST00000533440	C2orf48	Q96LS8	159 aa		4.62	□□□□□ -1.67
NXF1-215	ENST00000533440	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.61	□□□□□ -1.67
NXF1-215	ENST00000533440		F2Z2F3	143 aa		4.61	□□□□□ -1.67
NXF1-215	ENST00000533440	TSPAN13	O95857	204 aa		4.61	□□□□□ -1.67
NXF1-215	ENST00000533440	RPS20	P60866	119 aa	Known RBP	4.61	□□□□□ -1.67
NXF1-215	ENST00000533440	RPL18A	Q02543	176 aa	Known RBP	4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 285.9 ms