RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 NIT1Q86X76 327 aa12.4□□□□□ -0.42
PPP1CA-208ENST00000532446 STARD9Q9P2P6 4700 aa12.4□□□□□ -0.42
PPP1CA-208ENST00000532446 TCAPO15273 167 aa12.4□□□□□ -0.43
PPP1CA-208ENST00000532446 TMEM97Q5BJF2 176 aa12.4□□□□□ -0.43
PPP1CA-208ENST00000532446 LYPD5Q6UWN5 251 aa12.4□□□□□ -0.43
PPP1CA-208ENST00000532446 FA2HQ7L5A8 372 aa12.4□□□□□ -0.43
PPP1CA-208ENST00000532446 BAGE3Q86Y29 109 aa12.4□□□□□ -0.43
PPP1CA-208ENST00000532446 K7EMI3 77 aa12.39□□□□□ -0.43
PPP1CA-208ENST00000532446 LINC00614P0C842 121 aa12.39□□□□□ -0.43
PPP1CA-208ENST00000532446 FCER1GP30273 86 aa12.39□□□□□ -0.43
PPP1CA-208ENST00000532446 ESRGQ1W209 222 aa12.39□□□□□ -0.43
PPP1CA-208ENST00000532446 TRBV6-8A0A0A6YYG3 113 aa12.38□□□□□ -0.43
PPP1CA-208ENST00000532446 LINC00310P59036 64 aa12.37□□□□□ -0.43
PPP1CA-208ENST00000532446 RNASEKQ6P5S7 137 aaKnown RBP12.37□□□□□ -0.43
PPP1CA-208ENST00000532446 AP5S1Q9NUS5 200 aa12.37□□□□□ -0.43
PPP1CA-208ENST00000532446 IGHV1-24A0A0C4DH33 117 aa12.36□□□□□ -0.43
PPP1CA-208ENST00000532446 SERF1AO75920 110 aa12.36□□□□□ -0.43
PPP1CA-208ENST00000532446 ESDP10768 282 aa12.36□□□□□ -0.43
PPP1CA-208ENST00000532446 AMTP48728 403 aa12.36□□□□□ -0.43
PPP1CA-208ENST00000532446 LAGE3Q14657 143 aa12.36□□□□□ -0.43
PPP1CA-208ENST00000532446 COA6Q5JTJ3 125 aaKnown RBP12.36□□□□□ -0.43
PPP1CA-208ENST00000532446 LELP1Q5T871 98 aa12.36□□□□□ -0.43
PPP1CA-208ENST00000532446 CHCHD1Q96BP2 118 aaKnown RBP12.36□□□□□ -0.43
PPP1CA-208ENST00000532446 CHCHD7Q9BUK0 85 aa12.36□□□□□ -0.43
PPP1CA-208ENST00000532446 TRBV25-1A0A075B6N4 114 aa12.35□□□□□ -0.43
PPP1CA-208ENST00000532446 NDUFA6P56556 154 aa12.35□□□□□ -0.43
PPP1CA-208ENST00000532446 ORMDL2Q53FV1 153 aa12.35□□□□□ -0.43
PPP1CA-208ENST00000532446 TENM2Q9NT68 2774 aa12.35□□□□□ -0.43
PPP1CA-208ENST00000532446 PLECQ15149 4684 aaKnown RBP12.35□□□□□ -0.43
PPP1CA-208ENST00000532446 CASC10Q5T4H9 136 aa12.34□□□□□ -0.43
PPP1CA-208ENST00000532446 NUPR1O60356 82 aa12.34□□□□□ -0.43
PPP1CA-208ENST00000532446 CCL18P55774 89 aa12.34□□□□□ -0.43
PPP1CA-208ENST00000532446 TMEM243Q9BU79 118 aa12.34□□□□□ -0.43
PPP1CA-208ENST00000532446 C20orf203Q8NBC4 194 aa12.33□□□□□ -0.44
PPP1CA-208ENST00000532446 LINC00588Q9Y4M8 146 aa12.33□□□□□ -0.44
PPP1CA-208ENST00000532446 HSBP1O75506 76 aa12.31□□□□□ -0.44
PPP1CA-208ENST00000532446 MRPS16Q9Y3D3 137 aaKnown RBP12.31□□□□□ -0.44
PPP1CA-208ENST00000532446 RYR3Q15413 4870 aa12.3□□□□□ -0.44
PPP1CA-208ENST00000532446 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.3□□□□□ -0.44
PPP1CA-208ENST00000532446 A0A096LNJ9 63 aa12.3□□□□□ -0.44
PPP1CA-208ENST00000532446 TRAV8-6A0A0B4J262 113 aa12.3□□□□□ -0.44
PPP1CA-208ENST00000532446 IGKV2-29A2NJV5 120 aaPredicted RBP12.3□□□□□ -0.44
PPP1CA-208ENST00000532446 PMCHL1Q16048 86 aa12.3□□□□□ -0.44
PPP1CA-208ENST00000532446 CHCHD5Q9BSY4 110 aa12.3□□□□□ -0.44
PPP1CA-208ENST00000532446 H7C423 109 aa12.29□□□□□ -0.44
PPP1CA-208ENST00000532446 BTF3P20290 206 aaKnown RBP12.29□□□□□ -0.44
PPP1CA-208ENST00000532446 G0S2P27469 103 aa12.29□□□□□ -0.44
PPP1CA-208ENST00000532446 RPL39P62891 51 aaKnown RBP12.29□□□□□ -0.44
PPP1CA-208ENST00000532446 C2orf66Q6UXQ4 117 aa12.29□□□□□ -0.44
PPP1CA-208ENST00000532446 WFDC10BQ8IUB3 73 aa12.28□□□□□ -0.44
PPP1CA-208ENST00000532446 TMEM18Q96B42 140 aa12.28□□□□□ -0.44
PPP1CA-208ENST00000532446 TOMM6Q96B49 74 aa12.28□□□□□ -0.44
PPP1CA-208ENST00000532446 UPK3BQ9BT76 320 aa12.28□□□□□ -0.44
PPP1CA-208ENST00000532446 CYSLTR1Q9Y271 337 aa12.28□□□□□ -0.44
PPP1CA-208ENST00000532446 TMA7Q9Y2S6 64 aaKnown RBP12.28□□□□□ -0.44
PPP1CA-208ENST00000532446 UBE2L6O14933 153 aa12.27□□□□□ -0.44
PPP1CA-208ENST00000532446 HBDP02042 147 aa12.27□□□□□ -0.44
PPP1CA-208ENST00000532446 S100A6P06703 90 aa12.27□□□□□ -0.44
PPP1CA-208ENST00000532446 GAGE6Q13070 117 aa12.27□□□□□ -0.44
PPP1CA-208ENST00000532446 FAM19A2Q8N3H0 131 aa12.27□□□□□ -0.44
PPP1CA-208ENST00000532446 LINC01549A6NIU2 74 aa12.26□□□□□ -0.45
PPP1CA-208ENST00000532446 FGF6P10767 208 aa12.26□□□□□ -0.45
PPP1CA-208ENST00000532446 MRPL52Q86TS9 123 aaKnown RBP12.26□□□□□ -0.45
PPP1CA-208ENST00000532446 UBE2DNLQ8IWF7 75 aa12.26□□□□□ -0.45
PPP1CA-208ENST00000532446 TIMM21Q9BVV7 248 aa12.26□□□□□ -0.45
PPP1CA-208ENST00000532446 UBE2D4Q9Y2X8 147 aa12.26□□□□□ -0.45
PPP1CA-208ENST00000532446 TMEM262E9PQX1 116 aa12.25□□□□□ -0.45
PPP1CA-208ENST00000532446 PKIAP61925 76 aa12.25□□□□□ -0.45
PPP1CA-208ENST00000532446 LYSTQ99698 3801 aa12.25□□□□□ -0.45
PPP1CA-208ENST00000532446 MPV17L2Q567V2 206 aa12.24□□□□□ -0.45
PPP1CA-208ENST00000532446 PDZD11Q5EBL8 140 aa12.24□□□□□ -0.45
PPP1CA-208ENST00000532446 SPANXA1Q9NS26 97 aa12.24□□□□□ -0.45
PPP1CA-208ENST00000532446 PYGO1Q9Y3Y4 419 aa12.24□□□□□ -0.45
PPP1CA-208ENST00000532446 CSDC2Q9Y534 153 aaKnown RBP12.24□□□□□ -0.45
PPP1CA-208ENST00000532446 A0A1B0GUV1 79 aa12.23□□□□□ -0.45
PPP1CA-208ENST00000532446 C5orf52A6NGY3 159 aa12.23□□□□□ -0.45
PPP1CA-208ENST00000532446 IGIPA6NJ69 53 aa12.23□□□□□ -0.45
PPP1CA-208ENST00000532446 SIVA1O15304 175 aa12.23□□□□□ -0.45
PPP1CA-208ENST00000532446 ZNF25P17030 456 aaPredicted RBP12.23□□□□□ -0.45
PPP1CA-208ENST00000532446 SNRPEP62304 92 aaKnown RBP12.23□□□□□ -0.45
PPP1CA-208ENST00000532446 SMAGPQ0VAQ4 97 aa12.23□□□□□ -0.45
PPP1CA-208ENST00000532446 AMMECR1LQ6DCA0 310 aa12.23□□□□□ -0.45
PPP1CA-208ENST00000532446 Q8N3U1 123 aa12.23□□□□□ -0.45
PPP1CA-208ENST00000532446 VPS13DQ5THJ4 4388 aa12.23□□□□□ -0.45
PPP1CA-208ENST00000532446 A0A087WX48 190 aa12.22□□□□□ -0.45
PPP1CA-208ENST00000532446 DNAH10OSP0CZ25 163 aa12.22□□□□□ -0.45
PPP1CA-208ENST00000532446 RBX1P62877 108 aa12.22□□□□□ -0.45
PPP1CA-208ENST00000532446 LINC01556Q5JQF7 62 aa12.22□□□□□ -0.45
PPP1CA-208ENST00000532446 LGALS9CQ6DKI2 356 aa12.22□□□□□ -0.45
PPP1CA-208ENST00000532446 ERASQ7Z444 233 aa12.22□□□□□ -0.45
PPP1CA-208ENST00000532446 HIST3H2BBQ8N257 126 aa12.22□□□□□ -0.45
PPP1CA-208ENST00000532446 SCGB3A1Q96QR1 104 aa12.22□□□□□ -0.45
PPP1CA-208ENST00000532446 IGLV4-60A0A075B6I1 120 aa12.21□□□□□ -0.45
PPP1CA-208ENST00000532446 Q8N976 141 aa12.21□□□□□ -0.45
PPP1CA-208ENST00000532446 FAM104AQ969W3 186 aa12.21□□□□□ -0.45
PPP1CA-208ENST00000532446 TIMM17AQ99595 171 aa12.21□□□□□ -0.45
PPP1CA-208ENST00000532446 Q9H8V8 135 aa12.21□□□□□ -0.45
PPP1CA-208ENST00000532446 OR5A1Q8NGJ0 315 aa12.21□□□□□ -0.46
PPP1CA-208ENST00000532446 LEPROTL1O95214 131 aa12.2□□□□□ -0.46
PPP1CA-208ENST00000532446 IGHV3-30P01768 117 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms