RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 CFAP126Q5VTH2 177 aa5.53□□□□□ -1.52
CTNND1-229ENST00000531014 TRBV7-7A0A0K0K1E9 115 aa5.53□□□□□ -1.52
CTNND1-229ENST00000531014 KAAG1Q9UBP8 84 aa5.53□□□□□ -1.52
CTNND1-229ENST00000531014 MYO7BQ6PIF6 2116 aa5.53□□□□□ -1.52
CTNND1-229ENST00000531014 BEAN1Q3B7T3 259 aa5.52□□□□□ -1.53
CTNND1-229ENST00000531014 MPDZO75970 2070 aa5.52□□□□□ -1.53
CTNND1-229ENST00000531014 A0A087WZ39 114 aa5.52□□□□□ -1.53
CTNND1-229ENST00000531014 SPAG11AQ6PDA7 123 aa5.52□□□□□ -1.53
CTNND1-229ENST00000531014 SIRPDQ9H106 197 aa5.52□□□□□ -1.53
CTNND1-229ENST00000531014 GP9P14770 177 aa5.52□□□□□ -1.53
CTNND1-229ENST00000531014 TMEM254Q8TBM7 123 aa5.52□□□□□ -1.53
CTNND1-229ENST00000531014 HELZP42694 1942 aaKnown RBP5.52□□□□□ -1.53
CTNND1-229ENST00000531014 TRBV10-1A0A0K0K1A3 114 aa5.52□□□□□ -1.53
CTNND1-229ENST00000531014 TPSG1Q9NRR2 321 aa5.52□□□□□ -1.53
CTNND1-229ENST00000531014 IBA57-AS1B1ANH7 110 aa5.51□□□□□ -1.53
CTNND1-229ENST00000531014 CTRLP40313 264 aa5.51□□□□□ -1.53
CTNND1-229ENST00000531014 Q8TCH9 128 aa5.51□□□□□ -1.53
CTNND1-229ENST00000531014 LINC00308Q8TCZ7 52 aa5.51□□□□□ -1.53
CTNND1-229ENST00000531014 CHD8Q9HCK8 2581 aa5.51□□□□□ -1.53
CTNND1-229ENST00000531014 UBE2D3P61077 147 aa5.51□□□□□ -1.53
CTNND1-229ENST00000531014 C17orf58Q2M2W7 97 aa5.51□□□□□ -1.53
CTNND1-229ENST00000531014 C6orf99Q4VX62 202 aa5.51□□□□□ -1.53
CTNND1-229ENST00000531014 SPINT4Q6UDR6 99 aa5.51□□□□□ -1.53
CTNND1-229ENST00000531014 ESM1Q9NQ30 184 aa5.51□□□□□ -1.53
CTNND1-229ENST00000531014 VPREB3Q9UKI3 123 aa5.51□□□□□ -1.53
CTNND1-229ENST00000531014 LOC107984640A0A0U1RRK4 108 aa5.5□□□□□ -1.53
CTNND1-229ENST00000531014 KMT2EQ8IZD2 1858 aa5.5□□□□□ -1.53
CTNND1-229ENST00000531014 TSC2P49815 1807 aa5.5□□□□□ -1.53
CTNND1-229ENST00000531014 PLA2G1BP04054 148 aaKnown RBP5.5□□□□□ -1.53
CTNND1-229ENST00000531014 LIMD2Q9BT23 127 aa5.5□□□□□ -1.53
CTNND1-229ENST00000531014 DHRS4-AS1Q9P1J3 65 aa5.5□□□□□ -1.53
CTNND1-229ENST00000531014 ZNF706Q9Y5V0 76 aaPredicted RBP5.5□□□□□ -1.53
CTNND1-229ENST00000531014 WNK1Q9H4A3 2382 aa5.5□□□□□ -1.53
CTNND1-229ENST00000531014 LY6HO94772 140 aa5.5□□□□□ -1.53
CTNND1-229ENST00000531014 FOXL2NBQ6ZUU3 175 aa5.5□□□□□ -1.53
CTNND1-229ENST00000531014 SPTAN1Q13813 2472 aaKnown RBP5.5□□□□□ -1.53
CTNND1-229ENST00000531014 IGF1P05019 195 aa5.5□□□□□ -1.53
CTNND1-229ENST00000531014 C19orf84I3L1E1 186 aa5.49□□□□□ -1.53
CTNND1-229ENST00000531014 CCL24O00175 119 aa5.49□□□□□ -1.53
CTNND1-229ENST00000531014 ZFAND2AQ8N6M9 145 aa5.49□□□□□ -1.53
CTNND1-229ENST00000531014 PKDREJQ9NTG1 2253 aa5.49□□□□□ -1.53
CTNND1-229ENST00000531014 A8MZ25 164 aa5.49□□□□□ -1.53
CTNND1-229ENST00000531014 POM121L12Q8N7R1 296 aa5.49□□□□□ -1.53
CTNND1-229ENST00000531014 WDR81Q562E7 1941 aa5.49□□□□□ -1.53
CTNND1-229ENST00000531014 CHD3Q12873 2000 aaKnown RBP5.49□□□□□ -1.53
CTNND1-229ENST00000531014 LST1O00453 97 aa5.49□□□□□ -1.53
CTNND1-229ENST00000531014 C22orf34Q6ZV56 151 aa5.49□□□□□ -1.53
CTNND1-229ENST00000531014 NRGNQ92686 78 aa5.49□□□□□ -1.53
CTNND1-229ENST00000531014 RNF185Q96GF1 192 aa5.49□□□□□ -1.53
CTNND1-229ENST00000531014 X6R8D5 127 aa5.49□□□□□ -1.53
CTNND1-229ENST00000531014 Q6ZR03 302 aa5.49□□□□□ -1.53
CTNND1-229ENST00000531014 PRO0255Q9UI72 69 aa5.49□□□□□ -1.53
CTNND1-229ENST00000531014 CACNA1AO00555 2505 aa5.49□□□□□ -1.53
CTNND1-229ENST00000531014 XAGE1AQ9HD64 81 aa5.48□□□□□ -1.53
CTNND1-229ENST00000531014 DNAJC9-AS1A6NH13 148 aa5.48□□□□□ -1.53
CTNND1-229ENST00000531014 IGKV1-17P01599 117 aa5.48□□□□□ -1.53
CTNND1-229ENST00000531014 RNASE3P12724 160 aaKnown RBP5.48□□□□□ -1.53
CTNND1-229ENST00000531014 TRBV6-1A0A0K0K1D8 114 aa5.48□□□□□ -1.53
CTNND1-229ENST00000531014 INSL3P51460 131 aa5.48□□□□□ -1.53
CTNND1-229ENST00000531014 PYGO1Q9Y3Y4 419 aa5.48□□□□□ -1.53
CTNND1-229ENST00000531014 C15orf65H3BRN8 121 aa5.47□□□□□ -1.53
CTNND1-229ENST00000531014 ESRGQ1W209 222 aa5.47□□□□□ -1.53
CTNND1-229ENST00000531014 KIF26BQ2KJY2 2108 aa5.47□□□□□ -1.53
CTNND1-229ENST00000531014 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.47□□□□□ -1.539e-7■■■□□ 18
CTNND1-229ENST00000531014 REG3AQ06141 175 aa5.47□□□□□ -1.53
CTNND1-229ENST00000531014 ADAMTS20P59510 1910 aa5.47□□□□□ -1.53
CTNND1-229ENST00000531014 ADAMTS9Q9P2N4 1935 aa5.47□□□□□ -1.53
CTNND1-229ENST00000531014 PLCE1Q9P212 2302 aa5.47□□□□□ -1.53
CTNND1-229ENST00000531014 TRBV6-5A0A0K0K1A5 114 aa5.47□□□□□ -1.53
CTNND1-229ENST00000531014 A0A1B0GXF2 115 aa5.47□□□□□ -1.53
CTNND1-229ENST00000531014 C8orf87E5RJ46 101 aa5.47□□□□□ -1.53
CTNND1-229ENST00000531014 CRYGAP11844 174 aa5.47□□□□□ -1.53
CTNND1-229ENST00000531014 CEMP1Q6PRD7 247 aaPredicted RBP5.47□□□□□ -1.53
CTNND1-229ENST00000531014 LINC00269Q8N2A0 174 aa5.46□□□□□ -1.53
CTNND1-229ENST00000531014 SPINK1P00995 79 aa5.46□□□□□ -1.54
CTNND1-229ENST00000531014 ZNF22P17026 224 aaPredicted RBP5.46□□□□□ -1.54
CTNND1-229ENST00000531014 B3GALT5-AS1P59052 145 aa5.46□□□□□ -1.54
CTNND1-229ENST00000531014 NEXN-AS1Q8NBZ9 246 aa5.46□□□□□ -1.54
CTNND1-229ENST00000531014 CHCHD10Q8WYQ3 142 aaPredicted RBP5.46□□□□□ -1.54
CTNND1-229ENST00000531014 CDKN2A-AS1Q9UH64 79 aa5.46□□□□□ -1.54
CTNND1-229ENST00000531014 NOTCH2Q04721 2471 aa5.46□□□□□ -1.54
CTNND1-229ENST00000531014 H7C423 109 aa5.46□□□□□ -1.54
CTNND1-229ENST00000531014 ZNF73O43830 326 aaPredicted RBP5.46□□□□□ -1.54
CTNND1-229ENST00000531014 MYCNOSP40205 109 aa5.46□□□□□ -1.54
CTNND1-229ENST00000531014 UBE2D1P51668 147 aa5.46□□□□□ -1.54
CTNND1-229ENST00000531014 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.46□□□□□ -1.54
CTNND1-229ENST00000531014 HIVEP2P31629 2446 aa5.46□□□□□ -1.54
CTNND1-229ENST00000531014 Q8N6K4 173 aa5.45□□□□□ -1.54
CTNND1-229ENST00000531014 C7orf33Q8WU49 177 aa5.45□□□□□ -1.54
CTNND1-229ENST00000531014 TP73-AS1Q9UF72 201 aa5.45□□□□□ -1.54
CTNND1-229ENST00000531014 HILS1P60008 231 aa5.45□□□□□ -1.54
CTNND1-229ENST00000531014 PPDPFQ9H3Y8 114 aa5.45□□□□□ -1.54
CTNND1-229ENST00000531014 SMAD5-AS1Q9Y6J3 95 aa5.45□□□□□ -1.54
CTNND1-229ENST00000531014 KIF26AQ9ULI4 1882 aaPredicted RBP5.45□□□□□ -1.54
CTNND1-229ENST00000531014 PIKFYVEQ9Y2I7 2098 aa5.45□□□□□ -1.54
CTNND1-229ENST00000531014 LY6LH3BQJ8 138 aa5.45□□□□□ -1.54
CTNND1-229ENST00000531014 PCOTHQ58A44 107 aa5.45□□□□□ -1.54
CTNND1-229ENST00000531014 C1orf147Q96MC9 270 aaPredicted RBP5.45□□□□□ -1.54
CTNND1-229ENST00000531014 PTPRSQ13332 1948 aa5.45□□□□□ -1.54
CTNND1-229ENST00000531014 hDV103S1A0JD37 113 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms