RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 SNRPD3P62318 126 aaKnown RBP8.58□□□□□ -1.04
USP35-207ENST00000530546 PAPPA-AS1Q5QFB9 102 aa8.58□□□□□ -1.04
USP35-207ENST00000530546 Q8N1Y9 231 aa8.58□□□□□ -1.04
USP35-207ENST00000530546 BAALCQ8WXS3 180 aa8.58□□□□□ -1.04
USP35-207ENST00000530546 RASL10AQ92737 203 aa8.58□□□□□ -1.04
USP35-207ENST00000530546 C11orf44Q8N8P7 122 aa8.58□□□□□ -1.04
USP35-207ENST00000530546 ODF3Q96PU9 254 aa8.58□□□□□ -1.04
USP35-207ENST00000530546 ACANP16112 2415 aa8.57□□□□□ -1.04
USP35-207ENST00000530546 K7EQG2 157 aa8.57□□□□□ -1.04
USP35-207ENST00000530546 RNASE3P12724 160 aaKnown RBP8.57□□□□□ -1.04
USP35-207ENST00000530546 SLC25A29Q8N8R3 303 aa8.57□□□□□ -1.04
USP35-207ENST00000530546 C15orf53Q8NAA6 179 aa8.57□□□□□ -1.04
USP35-207ENST00000530546 KLLNB2CW77 178 aa8.57□□□□□ -1.04
USP35-207ENST00000530546 SPINK13Q1W4C9 94 aa8.57□□□□□ -1.04
USP35-207ENST00000530546 A0A0J9YX75 114 aa8.56□□□□□ -1.04
USP35-207ENST00000530546 NTN5Q8WTR8 489 aaPredicted RBP8.56□□□□□ -1.04
USP35-207ENST00000530546 RPL39LQ96EH5 51 aaKnown RBP8.56□□□□□ -1.04
USP35-207ENST00000530546 ATXN8Q156A1 80 aa8.56□□□□□ -1.04
USP35-207ENST00000530546 APRG1Q8IVJ8 170 aa8.56□□□□□ -1.04
USP35-207ENST00000530546 JPT2Q9H910 190 aa8.56□□□□□ -1.04
USP35-207ENST00000530546 LGALS9O00182 355 aa8.55□□□□□ -1.04
USP35-207ENST00000530546 DEFB104AQ8WTQ1 72 aa8.55□□□□□ -1.04
USP35-207ENST00000530546 DPH3P1Q9H4G8 78 aa8.55□□□□□ -1.04
USP35-207ENST00000530546 SUMO2P61956 95 aaKnown RBP8.55□□□□□ -1.04
USP35-207ENST00000530546 C2orf66Q6UXQ4 117 aa8.55□□□□□ -1.04
USP35-207ENST00000530546 KLHL30-AS1Q8NEE0 82 aa8.55□□□□□ -1.04
USP35-207ENST00000530546 SETD2Q9BYW2 2564 aaPredicted RBP8.55□□□□□ -1.04
USP35-207ENST00000530546 TRAV2A0A0B4J234 112 aa8.55□□□□□ -1.04
USP35-207ENST00000530546 A0A1W2PRX2 142 aa8.55□□□□□ -1.04
USP35-207ENST00000530546 KNCNA6PVL3 124 aa8.55□□□□□ -1.04
USP35-207ENST00000530546 A0A0B4J2C4 111 aa8.54□□□□□ -1.04
USP35-207ENST00000530546 FAM240AA0A1B0GVK7 77 aa8.54□□□□□ -1.04
USP35-207ENST00000530546 TRPT1Q86TN4 253 aaKnown RBP8.54□□□□□ -1.04
USP35-207ENST00000530546 SPANXDQ9BXN6 97 aa8.54□□□□□ -1.04
USP35-207ENST00000530546 A0A087WWL8 130 aa8.54□□□□□ -1.04
USP35-207ENST00000530546 DNAJC9-AS1A6NH13 148 aa8.54□□□□□ -1.04
USP35-207ENST00000530546 IGHV3-33P01772 117 aa8.54□□□□□ -1.04
USP35-207ENST00000530546 PLA2G2AP14555 144 aa8.54□□□□□ -1.04
USP35-207ENST00000530546 LINC01620Q4KN68 170 aa8.54□□□□□ -1.04
USP35-207ENST00000530546 RNF152Q8N8N0 203 aa8.54□□□□□ -1.04
USP35-207ENST00000530546 HELZ2Q9BYK8 2649 aaKnown RBP8.54□□□□□ -1.04
USP35-207ENST00000530546 H3BMM0 161 aa8.53□□□□□ -1.04
USP35-207ENST00000530546 WIPF1O43516 503 aa8.53□□□□□ -1.04
USP35-207ENST00000530546 HTN1P15515 57 aa8.53□□□□□ -1.04
USP35-207ENST00000530546 DEFB131AP59861 70 aa8.53□□□□□ -1.04
USP35-207ENST00000530546 Q6ZSV7 163 aa8.53□□□□□ -1.04
USP35-207ENST00000530546 Q8N2B8 174 aa8.53□□□□□ -1.04
USP35-207ENST00000530546 UBE2WQ96B02 151 aa8.53□□□□□ -1.04
USP35-207ENST00000530546 TRBV10-2A0A0K0K1G8 114 aa8.53□□□□□ -1.04
USP35-207ENST00000530546 J3QKU1 62 aa8.53□□□□□ -1.04
USP35-207ENST00000530546 NF1P21359 2839 aa8.53□□□□□ -1.04
USP35-207ENST00000530546 DUSP14O95147 198 aaKnown RBP8.52□□□□□ -1.04
USP35-207ENST00000530546 TMEM263Q8WUH6 116 aaKnown RBP8.52□□□□□ -1.04
USP35-207ENST00000530546 MUC4Q99102 2169 aa8.52□□□□□ -1.04
USP35-207ENST00000530546 MTORP42345 2549 aa8.52□□□□□ -1.05
USP35-207ENST00000530546 TRBV7-7A0A0K0K1E9 115 aa8.52□□□□□ -1.05
USP35-207ENST00000530546 F5H697 171 aa8.52□□□□□ -1.05
USP35-207ENST00000530546 FAM74A4Q5TZK3 123 aa8.52□□□□□ -1.05
USP35-207ENST00000530546 LINC01587Q99440 93 aa8.52□□□□□ -1.05
USP35-207ENST00000530546 ITPR2Q14571 2701 aa8.52□□□□□ -1.05
USP35-207ENST00000530546 IGLV4-69A0A075B6H9 119 aa8.52□□□□□ -1.05
USP35-207ENST00000530546 TEX49A0A1B0GTD5 131 aa8.52□□□□□ -1.05
USP35-207ENST00000530546 C11orf86A6NJI1 115 aa8.52□□□□□ -1.05
USP35-207ENST00000530546 MED14OSP0DP75 135 aa8.52□□□□□ -1.05
USP35-207ENST00000530546 TMEM61Q8N0U2 210 aa8.52□□□□□ -1.05
USP35-207ENST00000530546 DYNLRB2Q8TF09 96 aa8.52□□□□□ -1.05
USP35-207ENST00000530546 PPDPFQ9H3Y8 114 aa8.52□□□□□ -1.05
USP35-207ENST00000530546 ESM1Q9NQ30 184 aa8.52□□□□□ -1.05
USP35-207ENST00000530546 PPP1R17O96001 155 aa8.51□□□□□ -1.05
USP35-207ENST00000530546 DNAJC30Q96LL9 226 aa8.51□□□□□ -1.05
USP35-207ENST00000530546 WNK1Q9H4A3 2382 aa8.51□□□□□ -1.05
USP35-207ENST00000530546 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.51□□□□□ -1.05
USP35-207ENST00000530546 C4orf3Q8WVX3 66 aa8.51□□□□□ -1.05
USP35-207ENST00000530546 CRYGDP07320 174 aa8.5□□□□□ -1.05
USP35-207ENST00000530546 IGHV1OR15-1A0A075B7D0 117 aa8.5□□□□□ -1.05
USP35-207ENST00000530546 IGHV3-16A0A0C4DH30 117 aa8.5□□□□□ -1.05
USP35-207ENST00000530546 M0R2P5 195 aa8.5□□□□□ -1.05
USP35-207ENST00000530546 PEMTQ9UBM1 199 aa8.5□□□□□ -1.05
USP35-207ENST00000530546 TRBV30A0A0K0K1B3 111 aa8.49□□□□□ -1.05
USP35-207ENST00000530546 PRM2P04554 102 aa8.49□□□□□ -1.05
USP35-207ENST00000530546 PMVKQ15126 192 aa8.49□□□□□ -1.05
USP35-207ENST00000530546 AMELXQ99217 191 aa8.49□□□□□ -1.05
USP35-207ENST00000530546 H3BT86 120 aa8.49□□□□□ -1.05
USP35-207ENST00000530546 IMUPQ9GZP8 106 aa8.49□□□□□ -1.05
USP35-207ENST00000530546 TSPEAR-AS2P59090 65 aa8.49□□□□□ -1.05
USP35-207ENST00000530546 DEFB121Q5J5C9 76 aa8.49□□□□□ -1.05
USP35-207ENST00000530546 SUMO4Q6EEV6 95 aa8.49□□□□□ -1.05
USP35-207ENST00000530546 TMEM141Q96I45 108 aa8.49□□□□□ -1.05
USP35-207ENST00000530546 CSDC2Q9Y534 153 aaKnown RBP8.49□□□□□ -1.05
USP35-207ENST00000530546 KIF25-AS1Q9Y6Z4 181 aa8.49□□□□□ -1.05
USP35-207ENST00000530546 PDZD2O15018 2839 aa8.48□□□□□ -1.05
USP35-207ENST00000530546 J3QQQ9 107 aa8.48□□□□□ -1.05
USP35-207ENST00000530546 LGALS3P17931 250 aaKnown RBP8.48□□□□□ -1.05
USP35-207ENST00000530546 LINC00315P59091 139 aa8.48□□□□□ -1.05
USP35-207ENST00000530546 TMEM86BQ8N661 226 aa8.48□□□□□ -1.05
USP35-207ENST00000530546 TMEM101Q96IK0 257 aa8.48□□□□□ -1.05
USP35-207ENST00000530546 CHCHD5Q9BSY4 110 aa8.48□□□□□ -1.05
USP35-207ENST00000530546 AKAP9Q99996 3911 aa8.48□□□□□ -1.05
USP35-207ENST00000530546 NXPH4O95158 308 aa8.48□□□□□ -1.05
USP35-207ENST00000530546 RBMY1A1P0DJD3 496 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms