RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 NIT2Q9NQR4 276 aa13.17□□□□□ -0.3
TSPAN4-219ENST00000530404 TRBV20OR9-2A0A075B6H5 130 aa13.16□□□□□ -0.3
TSPAN4-219ENST00000530404 TRGC1P0CF51 173 aa13.16□□□□□ -0.3
TSPAN4-219ENST00000530404 AMTP48728 403 aa13.16□□□□□ -0.3
TSPAN4-219ENST00000530404 EIF5AP63241 154 aaKnown RBP13.16□□□□□ -0.3
TSPAN4-219ENST00000530404 SPACA4Q8TDM5 124 aa13.16□□□□□ -0.3
TSPAN4-219ENST00000530404 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.15□□□□□ -0.3
TSPAN4-219ENST00000530404 GAGE12HA6NDE8 117 aa13.15□□□□□ -0.3
TSPAN4-219ENST00000530404 F2Z2F3 143 aa13.15□□□□□ -0.3
TSPAN4-219ENST00000530404 IFNA1P01562 189 aa13.15□□□□□ -0.3
TSPAN4-219ENST00000530404 SULT1A2P50226 295 aa13.15□□□□□ -0.3
TSPAN4-219ENST00000530404 COTL1Q14019 142 aa13.15□□□□□ -0.3
TSPAN4-219ENST00000530404 WDR73Q6P4I2 378 aa13.15□□□□□ -0.3
TSPAN4-219ENST00000530404 Q6ZRU5 148 aa13.15□□□□□ -0.3
TSPAN4-219ENST00000530404 C15orf56Q8N910 161 aa13.15□□□□□ -0.3
TSPAN4-219ENST00000530404 XKRY2A2RUG3 117 aa13.14□□□□□ -0.31
TSPAN4-219ENST00000530404 TRAV1-1A0A0B4J248 108 aa13.13□□□□□ -0.31
TSPAN4-219ENST00000530404 TRAV26-2A0A0B4J265 109 aa13.13□□□□□ -0.31
TSPAN4-219ENST00000530404 PHOX2AO14813 284 aa13.13□□□□□ -0.31
TSPAN4-219ENST00000530404 HIGD2BQ4VC39 106 aa13.13□□□□□ -0.31
TSPAN4-219ENST00000530404 MED9Q9NWA0 146 aa13.13□□□□□ -0.31
TSPAN4-219ENST00000530404 MEF2BQ02080 365 aaPredicted RBP13.12□□□□□ -0.31
TSPAN4-219ENST00000530404 SMIM12Q96EX1 92 aa13.12□□□□□ -0.31
TSPAN4-219ENST00000530404 RNF185Q96GF1 192 aa13.12□□□□□ -0.31
TSPAN4-219ENST00000530404 CTRLP40313 264 aa13.11□□□□□ -0.31
TSPAN4-219ENST00000530404 COX6A2Q02221 97 aa13.11□□□□□ -0.31
TSPAN4-219ENST00000530404 TWIST1Q15672 202 aa13.11□□□□□ -0.31
TSPAN4-219ENST00000530404 GATD1Q8NB37 220 aa13.11□□□□□ -0.31
TSPAN4-219ENST00000530404 NUDT10Q8NFP7 164 aa13.11□□□□□ -0.31
TSPAN4-219ENST00000530404 NUDT11Q96G61 164 aa13.11□□□□□ -0.31
TSPAN4-219ENST00000530404 LRP2P98164 4655 aa13.11□□□□□ -0.31
TSPAN4-219ENST00000530404 PDE6DO43924 150 aa13.1□□□□□ -0.31
TSPAN4-219ENST00000530404 Q6ZNX1 250 aa13.1□□□□□ -0.31
TSPAN4-219ENST00000530404 C9orf62Q8N4C0 152 aa13.1□□□□□ -0.31
TSPAN4-219ENST00000530404 RPL39LQ96EH5 51 aaKnown RBP13.1□□□□□ -0.31
TSPAN4-219ENST00000530404 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.09□□□□□ -0.31
TSPAN4-219ENST00000530404 IGKV2-29A2NJV5 120 aaPredicted RBP13.09□□□□□ -0.31
TSPAN4-219ENST00000530404 TEX46H3BTG2 121 aa13.09□□□□□ -0.31
TSPAN4-219ENST00000530404 PRSS3P2Q8NHM4 247 aa13.09□□□□□ -0.31
TSPAN4-219ENST00000530404 RNASE7Q9H1E1 156 aaKnown RBP13.09□□□□□ -0.31
TSPAN4-219ENST00000530404 PLAC8Q9NZF1 115 aa13.09□□□□□ -0.31
TSPAN4-219ENST00000530404 IGKV2-24A0A0C4DH68 120 aa13.08□□□□□ -0.32
TSPAN4-219ENST00000530404 MAJINQ3KP22 176 aa13.08□□□□□ -0.32
TSPAN4-219ENST00000530404 BCL2P10415 239 aa13.07□□□□□ -0.32
TSPAN4-219ENST00000530404 RPS10P46783 165 aaKnown RBP13.07□□□□□ -0.32
TSPAN4-219ENST00000530404 FOXA3P55318 350 aaPredicted RBP13.07□□□□□ -0.32
TSPAN4-219ENST00000530404 AMMECR1LQ6DCA0 310 aa13.07□□□□□ -0.32
TSPAN4-219ENST00000530404 RNASEKQ6P5S7 137 aaKnown RBP13.07□□□□□ -0.32
TSPAN4-219ENST00000530404 CFAP161Q6P656 301 aa13.07□□□□□ -0.32
TSPAN4-219ENST00000530404 CHCHD10Q8WYQ3 142 aaPredicted RBP13.07□□□□□ -0.32
TSPAN4-219ENST00000530404 BIN3Q9NQY0 253 aa13.07□□□□□ -0.32
TSPAN4-219ENST00000530404 K7EN84 100 aa13.06□□□□□ -0.32
TSPAN4-219ENST00000530404 C7orf33Q8WU49 177 aa13.06□□□□□ -0.32
TSPAN4-219ENST00000530404 RPP21Q9H633 154 aaKnown RBP13.06□□□□□ -0.32
TSPAN4-219ENST00000530404 NDUFS6O75380 124 aaKnown RBP13.05□□□□□ -0.32
TSPAN4-219ENST00000530404 LYPD6BQ8NI32 183 aa13.05□□□□□ -0.32
TSPAN4-219ENST00000530404 GTSF1Q8WW33 167 aa13.05□□□□□ -0.32
TSPAN4-219ENST00000530404 CNFNQ9BYD5 112 aa13.05□□□□□ -0.32
TSPAN4-219ENST00000530404 APCSP02743 223 aa13.04□□□□□ -0.32
TSPAN4-219ENST00000530404 ODF1Q14990 250 aa13.04□□□□□ -0.32
TSPAN4-219ENST00000530404 EIF5AL1Q6IS14 154 aaKnown RBP13.04□□□□□ -0.32
TSPAN4-219ENST00000530404 STPG4Q8N801 248 aa13.03□□□□□ -0.32
TSPAN4-219ENST00000530404 OCC1Q8TAD7 63 aa13.03□□□□□ -0.32
TSPAN4-219ENST00000530404 A0A096LNI7 61 aa13.02□□□□□ -0.33
TSPAN4-219ENST00000530404 FGF6P10767 208 aa13.02□□□□□ -0.33
TSPAN4-219ENST00000530404 LINC00526Q96FQ7 95 aa13.02□□□□□ -0.33
TSPAN4-219ENST00000530404 GVQW2A0A096LPI5 108 aaPredicted RBP13.01□□□□□ -0.33
TSPAN4-219ENST00000530404 NCR2O95944 276 aa13.01□□□□□ -0.33
TSPAN4-219ENST00000530404 FOXI1Q12951 378 aa13.01□□□□□ -0.33
TSPAN4-219ENST00000530404 SDHAF1A6NFY7 115 aa13□□□□□ -0.33
TSPAN4-219ENST00000530404 PRR3P79522 188 aaKnown RBP13□□□□□ -0.33
TSPAN4-219ENST00000530404 XCL1P47992 114 aa12.99□□□□□ -0.33
TSPAN4-219ENST00000530404 SMIM15Q7Z3B0 74 aa12.99□□□□□ -0.33
TSPAN4-219ENST00000530404 FAM231BA6NCW3 169 aa12.98□□□□□ -0.33
TSPAN4-219ENST00000530404 GAS8-AS1O95177 125 aa12.98□□□□□ -0.33
TSPAN4-219ENST00000530404 OR5A1Q8NGJ0 315 aa12.98□□□□□ -0.33
TSPAN4-219ENST00000530404 RNF213Q63HN8 5207 aa12.98□□□□□ -0.33
TSPAN4-219ENST00000530404 H7C423 109 aa12.97□□□□□ -0.33
TSPAN4-219ENST00000530404 PMCHP20382 165 aa12.97□□□□□ -0.33
TSPAN4-219ENST00000530404 CCL25O15444 150 aa12.96□□□□□ -0.33
TSPAN4-219ENST00000530404 GATCO43716 136 aaKnown RBP12.96□□□□□ -0.33
TSPAN4-219ENST00000530404 LINC01600Q96MT4 127 aa12.96□□□□□ -0.33
TSPAN4-219ENST00000530404 LINC00959A0A1B0GUT2 108 aa12.95□□□□□ -0.34
TSPAN4-219ENST00000530404 I3L3M4 83 aa12.95□□□□□ -0.34
TSPAN4-219ENST00000530404 SLC51BQ86UW2 128 aa12.95□□□□□ -0.34
TSPAN4-219ENST00000530404 TMEM242Q9NWH2 141 aa12.95□□□□□ -0.34
TSPAN4-219ENST00000530404 ZNF25P17030 456 aaPredicted RBP12.94□□□□□ -0.34
TSPAN4-219ENST00000530404 TMEM101Q96IK0 257 aa12.94□□□□□ -0.34
TSPAN4-219ENST00000530404 BTF3L4Q96K17 158 aa12.94□□□□□ -0.34
TSPAN4-219ENST00000530404 TSHBP01222 138 aa12.93□□□□□ -0.34
TSPAN4-219ENST00000530404 TAGLN2P37802 199 aaKnown RBP12.93□□□□□ -0.34
TSPAN4-219ENST00000530404 TEX261Q6UWH6 196 aa12.93□□□□□ -0.34
TSPAN4-219ENST00000530404 CARD19Q96LW7 228 aa12.93□□□□□ -0.34
TSPAN4-219ENST00000530404 IGHV1-58A0A0C4DH39 117 aa12.92□□□□□ -0.34
TSPAN4-219ENST00000530404 ESDP10768 282 aa12.92□□□□□ -0.34
TSPAN4-219ENST00000530404 CEBPGP53567 150 aa12.92□□□□□ -0.34
TSPAN4-219ENST00000530404 TRBV6-5A0A0K0K1A5 114 aa12.91□□□□□ -0.34
TSPAN4-219ENST00000530404 A8MWL6 223 aa12.91□□□□□ -0.34
TSPAN4-219ENST00000530404 TCTE3Q8IZS6 198 aa12.91□□□□□ -0.34
TSPAN4-219ENST00000530404 ST20Q9HBF5 79 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms