RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 FAM210AQ96ND0 272 aa15.08■□□□□ 0
PKP3-206ENST00000528036 hCG_2014768A0A024R1R8 64 aa15.07■□□□□ 0
PKP3-206ENST00000528036 NCR2O95944 276 aa15.07■□□□□ 0
PKP3-206ENST00000528036 FOXA3P55318 350 aaPredicted RBP15.07■□□□□ 0
PKP3-206ENST00000528036 VPS13BQ7Z7G8 4022 aa15.06■□□□□ 0
PKP3-206ENST00000528036 LINC01620Q4KN68 170 aa15.06■□□□□ 0
PKP3-206ENST00000528036 SCXQ7RTU7 201 aa15.06■□□□□ 0
PKP3-206ENST00000528036 GATD1Q8NB37 220 aa15.06■□□□□ 0
PKP3-206ENST00000528036 C20orf203Q8NBC4 194 aa15.06■□□□□ 0
PKP3-206ENST00000528036 EIF5A2Q9GZV4 153 aaKnown RBP15.06■□□□□ 0
PKP3-206ENST00000528036 CLPSL2Q6UWE3 100 aa15.05■□□□□ -0
PKP3-206ENST00000528036 GTSF1Q8WW33 167 aa15.05■□□□□ -0
PKP3-206ENST00000528036 DMBT1Q9UGM3 2413 aaPredicted RBP15.05■□□□□ -0
PKP3-206ENST00000528036 SRRM2Q9UQ35 2752 aaKnown RBP15.05■□□□□ -0
PKP3-206ENST00000528036 H7C423 109 aa15.04■□□□□ -0
PKP3-206ENST00000528036 KRTAP26-1Q6PEX3 210 aa15.04■□□□□ -0
PKP3-206ENST00000528036 FAM231BA6NCW3 169 aa15.03■□□□□ -0
PKP3-206ENST00000528036 PRSS1P07477 247 aa15.03■□□□□ -0
PKP3-206ENST00000528036 C9orf163Q8N9P6 203 aa15.03■□□□□ -0
PKP3-206ENST00000528036 DEFB104AQ8WTQ1 72 aa15.03■□□□□ -0
PKP3-206ENST00000528036 SMIM7Q9BQ49 75 aa15.03■□□□□ -0
PKP3-206ENST00000528036 GFRA4Q9GZZ7 299 aa15.03■□□□□ -0
PKP3-206ENST00000528036 CEBPGP53567 150 aa15.02■□□□□ -0
PKP3-206ENST00000528036 IGLV4-60A0A075B6I1 120 aa15.01□□□□□ -0.01
PKP3-206ENST00000528036 CIRBP-AS1Q8TBR5 109 aa15.01□□□□□ -0.01
PKP3-206ENST00000528036 DNAH8Q96JB1 4490 aa15.01□□□□□ -0.01
PKP3-206ENST00000528036 CFAP161Q6P656 301 aa15□□□□□ -0.01
PKP3-206ENST00000528036 TSKUQ8WUA8 353 aa15□□□□□ -0.01
PKP3-206ENST00000528036 OSTCQ9NRP0 149 aa15□□□□□ -0.01
PKP3-206ENST00000528036 AP5S1Q9NUS5 200 aa15□□□□□ -0.01
PKP3-206ENST00000528036 ZNF727A8MUV8 499 aa14.99□□□□□ -0.01
PKP3-206ENST00000528036 AMMECR1LQ6DCA0 310 aa14.99□□□□□ -0.01
PKP3-206ENST00000528036 LINC01551Q86U37 167 aa14.99□□□□□ -0.01
PKP3-206ENST00000528036 FLG2Q5D862 2391 aaPredicted RBP14.98□□□□□ -0.01
PKP3-206ENST00000528036 IGLV10-54A0A075B6I4 117 aa14.98□□□□□ -0.01
PKP3-206ENST00000528036 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.98□□□□□ -0.01
PKP3-206ENST00000528036 TRAV26-2A0A0B4J265 109 aa14.98□□□□□ -0.01
PKP3-206ENST00000528036 TRBV6-5A0A0K0K1A5 114 aa14.98□□□□□ -0.01
PKP3-206ENST00000528036 A0A1B0GUT8 65 aa14.98□□□□□ -0.01
PKP3-206ENST00000528036 APCSP02743 223 aa14.98□□□□□ -0.01
PKP3-206ENST00000528036 CNBPP62633 177 aaKnown RBP14.98□□□□□ -0.01
PKP3-206ENST00000528036 FAM74A3Q4VXF1 159 aa14.98□□□□□ -0.01
PKP3-206ENST00000528036 SDHAF1A6NFY7 115 aa14.97□□□□□ -0.01
PKP3-206ENST00000528036 I3L3M4 83 aa14.97□□□□□ -0.01
PKP3-206ENST00000528036 hDV102S1A0JD36 115 aa14.96□□□□□ -0.01
PKP3-206ENST00000528036 ZNF25P17030 456 aaPredicted RBP14.96□□□□□ -0.01
PKP3-206ENST00000528036 RPL39LQ96EH5 51 aaKnown RBP14.96□□□□□ -0.01
PKP3-206ENST00000528036 TMEM191AQ9H0A3 160 aa14.96□□□□□ -0.01
PKP3-206ENST00000528036 HIGD1CA8MV81 97 aa14.95□□□□□ -0.02
PKP3-206ENST00000528036 SRP19P09132 144 aaKnown RBP14.95□□□□□ -0.02
PKP3-206ENST00000528036 PMCHP20382 165 aa14.95□□□□□ -0.02
PKP3-206ENST00000528036 J3QL48 77 aa14.94□□□□□ -0.02
PKP3-206ENST00000528036 PPP1R17O96001 155 aa14.94□□□□□ -0.02
PKP3-206ENST00000528036 MRAP2Q96G30 205 aa14.94□□□□□ -0.02
PKP3-206ENST00000528036 ST20Q9HBF5 79 aa14.94□□□□□ -0.02
PKP3-206ENST00000528036 RNASEKQ6P5S7 137 aaKnown RBP14.93□□□□□ -0.02
PKP3-206ENST00000528036 TMEM101Q96IK0 257 aa14.93□□□□□ -0.02
PKP3-206ENST00000528036 BTF3L4Q96K17 158 aa14.93□□□□□ -0.02
PKP3-206ENST00000528036 RIGQ13278 110 aa14.92□□□□□ -0.02
PKP3-206ENST00000528036 TMEM241Q24JQ0 296 aa14.92□□□□□ -0.02
PKP3-206ENST00000528036 SDIM1Q6ZPB5 146 aa14.92□□□□□ -0.02
PKP3-206ENST00000528036 IGHV3-64A0A075B6Q5 118 aa14.91□□□□□ -0.02
PKP3-206ENST00000528036 FGF6P10767 208 aa14.91□□□□□ -0.02
PKP3-206ENST00000528036 SMDT1Q9H4I9 107 aa14.91□□□□□ -0.02
PKP3-206ENST00000528036 KRTAP29-1A8MX34 341 aaPredicted RBP14.9□□□□□ -0.02
PKP3-206ENST00000528036 GAGE12HA6NDE8 117 aa14.89□□□□□ -0.03
PKP3-206ENST00000528036 SMAGPQ0VAQ4 97 aa14.89□□□□□ -0.03
PKP3-206ENST00000528036 RNF185Q96GF1 192 aa14.89□□□□□ -0.03
PKP3-206ENST00000528036 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.88□□□□□ -0.03
PKP3-206ENST00000528036 IGKV2-29A2NJV5 120 aaPredicted RBP14.88□□□□□ -0.03
PKP3-206ENST00000528036 RAB4AP20338 218 aa14.88□□□□□ -0.03
PKP3-206ENST00000528036 PEA15Q15121 130 aa14.88□□□□□ -0.03
PKP3-206ENST00000528036 OR5A1Q8NGJ0 315 aa14.88□□□□□ -0.03
PKP3-206ENST00000528036 NAT8BQ9UHF3 227 aa14.88□□□□□ -0.03
PKP3-206ENST00000528036 V9GYV3 84 aa14.88□□□□□ -0.03
PKP3-206ENST00000528036 MYCBP2O75592 4640 aa14.88□□□□□ -0.03
PKP3-206ENST00000528036 TRBV27A0A0K0K1C4 114 aa14.87□□□□□ -0.03
PKP3-206ENST00000528036 ESDP10768 282 aa14.87□□□□□ -0.03
PKP3-206ENST00000528036 CHCHD10Q8WYQ3 142 aaPredicted RBP14.87□□□□□ -0.03
PKP3-206ENST00000528036 ISOC2Q96AB3 205 aa14.87□□□□□ -0.03
PKP3-206ENST00000528036 IGKV3OR2-268A0A0C4DH90 116 aa14.86□□□□□ -0.03
PKP3-206ENST00000528036 POLR2KP53803 58 aaKnown RBP14.86□□□□□ -0.03
PKP3-206ENST00000528036 CIRBPQ14011 172 aaKnown RBP14.86□□□□□ -0.03
PKP3-206ENST00000528036 NAT8Q9UHE5 227 aa14.86□□□□□ -0.03
PKP3-206ENST00000528036 VCYO14598 125 aa14.85□□□□□ -0.03
PKP3-206ENST00000528036 RPL37AP61513 92 aaKnown RBP14.85□□□□□ -0.03
PKP3-206ENST00000528036 NUP35Q8NFH5 326 aa14.85□□□□□ -0.03
PKP3-206ENST00000528036 PKIGQ9Y2B9 76 aa14.85□□□□□ -0.03
PKP3-206ENST00000528036 A0A1B0GW15 77 aa14.84□□□□□ -0.03
PKP3-206ENST00000528036 TSHBP01222 138 aa14.84□□□□□ -0.03
PKP3-206ENST00000528036 KRTAP10-4P60372 401 aaPredicted RBP14.84□□□□□ -0.03
PKP3-206ENST00000528036 RPL23P62829 140 aaKnown RBP14.84□□□□□ -0.03
PKP3-206ENST00000528036 MRPL52Q86TS9 123 aaKnown RBP14.84□□□□□ -0.03
PKP3-206ENST00000528036 PPP1R2P9O14990 202 aa14.83□□□□□ -0.04
PKP3-206ENST00000528036 OXTP01178 125 aa14.83□□□□□ -0.04
PKP3-206ENST00000528036 RPS10P46783 165 aaKnown RBP14.83□□□□□ -0.04
PKP3-206ENST00000528036 AMN1Q8IY45 258 aa14.83□□□□□ -0.04
PKP3-206ENST00000528036 DPH3Q96FX2 82 aa14.83□□□□□ -0.04
PKP3-206ENST00000528036 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.83□□□□□ -0.04
PKP3-206ENST00000528036 HERC1Q15751 4861 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms