RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 PGLYRP4Q96LB8 373 aa9.85□□□□□ -0.83
CHMP4A-203ENST00000527154 TMEM243Q9BU79 118 aa9.85□□□□□ -0.83
CHMP4A-203ENST00000527154 TRAV26-2A0A0B4J265 109 aa9.84□□□□□ -0.83
CHMP4A-203ENST00000527154 F5H697 171 aa9.84□□□□□ -0.83
CHMP4A-203ENST00000527154 SPANXN1Q5VSR9 72 aa9.84□□□□□ -0.83
CHMP4A-203ENST00000527154 MUC21A0A140T8X8 626 aa9.83□□□□□ -0.84
CHMP4A-203ENST00000527154 KCNRGQ8N5I3 272 aa9.83□□□□□ -0.84
CHMP4A-203ENST00000527154 SSTP61278 116 aa9.82□□□□□ -0.84
CHMP4A-203ENST00000527154 CACNG7P62955 275 aa9.82□□□□□ -0.84
CHMP4A-203ENST00000527154 EIF5AP63241 154 aaKnown RBP9.82□□□□□ -0.84
CHMP4A-203ENST00000527154 FSIP2Q5CZC0 6907 aa9.82□□□□□ -0.84
CHMP4A-203ENST00000527154 PAGE4O60829 102 aa9.81□□□□□ -0.84
CHMP4A-203ENST00000527154 SULT1A2P50226 295 aa9.81□□□□□ -0.84
CHMP4A-203ENST00000527154 KANTRA0A1W2PQU2 76 aa9.8□□□□□ -0.84
CHMP4A-203ENST00000527154 S100A9P06702 114 aaKnown RBP9.8□□□□□ -0.84
CHMP4A-203ENST00000527154 SMIM17P0DL12 118 aa9.8□□□□□ -0.84
CHMP4A-203ENST00000527154 PTTG1IPP53801 180 aa9.8□□□□□ -0.84
CHMP4A-203ENST00000527154 FOXI1Q12951 378 aa9.8□□□□□ -0.84
CHMP4A-203ENST00000527154 Q6ZNX1 250 aa9.8□□□□□ -0.84
CHMP4A-203ENST00000527154 BAGE2Q86Y30 109 aa9.8□□□□□ -0.84
CHMP4A-203ENST00000527154 TCTE3Q8IZS6 198 aa9.8□□□□□ -0.84
CHMP4A-203ENST00000527154 CHCHD10Q8WYQ3 142 aaPredicted RBP9.8□□□□□ -0.84
CHMP4A-203ENST00000527154 IGLV1-50A0A075B6I6 118 aa9.79□□□□□ -0.84
CHMP4A-203ENST00000527154 A0A1W2PNN7 141 aa9.79□□□□□ -0.84
CHMP4A-203ENST00000527154 SCO2A0A1W2PP80 73 aa9.79□□□□□ -0.84
CHMP4A-203ENST00000527154 SMLR1H3BR10 107 aa9.79□□□□□ -0.84
CHMP4A-203ENST00000527154 BCL2L11O43521 198 aa9.79□□□□□ -0.84
CHMP4A-203ENST00000527154 KRTAP1-4P0C5Y4 121 aa9.79□□□□□ -0.84
CHMP4A-203ENST00000527154 AP1S3Q96PC3 154 aa9.79□□□□□ -0.84
CHMP4A-203ENST00000527154 MLST8Q9BVC4 326 aa9.79□□□□□ -0.84
CHMP4A-203ENST00000527154 CYTL1Q9NRR1 136 aa9.79□□□□□ -0.84
CHMP4A-203ENST00000527154 A0A1B0GV50 99 aa9.78□□□□□ -0.84
CHMP4A-203ENST00000527154 UMAD1C9J7I0 102 aa9.78□□□□□ -0.84
CHMP4A-203ENST00000527154 PRR4Q16378 134 aa9.78□□□□□ -0.84
CHMP4A-203ENST00000527154 CARD19Q96LW7 228 aa9.78□□□□□ -0.84
CHMP4A-203ENST00000527154 PFDN1O60925 122 aa9.77□□□□□ -0.85
CHMP4A-203ENST00000527154 SUMO4Q6EEV6 95 aa9.77□□□□□ -0.85
CHMP4A-203ENST00000527154 FER1L6-AS1Q8NA97 138 aa9.77□□□□□ -0.85
CHMP4A-203ENST00000527154 SFT2D1Q8WV19 159 aa9.77□□□□□ -0.85
CHMP4A-203ENST00000527154 MGPP08493 103 aa9.76□□□□□ -0.85
CHMP4A-203ENST00000527154 LCE2DQ5TA82 110 aaPredicted RBP9.76□□□□□ -0.85
CHMP4A-203ENST00000527154 FAM213BQ8TBF2 198 aa9.76□□□□□ -0.85
CHMP4A-203ENST00000527154 DIRC1Q969H9 104 aa9.76□□□□□ -0.85
CHMP4A-203ENST00000527154 H0Y9J4 135 aa9.75□□□□□ -0.85
CHMP4A-203ENST00000527154 NKX2-5P52952 324 aaPredicted RBP9.75□□□□□ -0.85
CHMP4A-203ENST00000527154 EIF5AL1Q6IS14 154 aaKnown RBP9.75□□□□□ -0.85
CHMP4A-203ENST00000527154 AKAP14Q86UN6 197 aa9.75□□□□□ -0.85
CHMP4A-203ENST00000527154 IGHV1-58A0A0C4DH39 117 aa9.74□□□□□ -0.85
CHMP4A-203ENST00000527154 MT-ND6P03923 174 aa9.74□□□□□ -0.85
CHMP4A-203ENST00000527154 IGLV7-43P04211 117 aa9.74□□□□□ -0.85
CHMP4A-203ENST00000527154 AMTP48728 403 aa9.74□□□□□ -0.85
CHMP4A-203ENST00000527154 C1orf137Q5JT78 98 aa9.74□□□□□ -0.85
CHMP4A-203ENST00000527154 RASL11AQ6T310 242 aa9.74□□□□□ -0.85
CHMP4A-203ENST00000527154 TMUB2Q71RG4 321 aa9.74□□□□□ -0.85
CHMP4A-203ENST00000527154 MBD3L1Q8WWY6 194 aa9.74□□□□□ -0.85
CHMP4A-203ENST00000527154 TPPP3Q9BW30 176 aa9.74□□□□□ -0.85
CHMP4A-203ENST00000527154 UBE2L6O14933 153 aa9.73□□□□□ -0.85
CHMP4A-203ENST00000527154 LINC00526Q96FQ7 95 aa9.73□□□□□ -0.85
CHMP4A-203ENST00000527154 NIT2Q9NQR4 276 aa9.73□□□□□ -0.85
CHMP4A-203ENST00000527154 IGLC6P0CF74 106 aa9.72□□□□□ -0.85
CHMP4A-203ENST00000527154 SYCNQ0VAF6 134 aa9.72□□□□□ -0.85
CHMP4A-203ENST00000527154 COTL1Q14019 142 aa9.72□□□□□ -0.85
CHMP4A-203ENST00000527154 C9orf116Q5BN46 136 aaPredicted RBP9.72□□□□□ -0.85
CHMP4A-203ENST00000527154 CRCT1Q9UGL9 99 aa9.72□□□□□ -0.85
CHMP4A-203ENST00000527154 IGKV3OR2-268A0A0C4DH90 116 aa9.71□□□□□ -0.86
CHMP4A-203ENST00000527154 LOC107984640A0A0U1RRK4 108 aa9.71□□□□□ -0.86
CHMP4A-203ENST00000527154 RPL35P42766 123 aaKnown RBP9.71□□□□□ -0.86
CHMP4A-203ENST00000527154 H7C423 109 aa9.7□□□□□ -0.86
CHMP4A-203ENST00000527154 OR2D3Q8NGH3 330 aa9.7□□□□□ -0.86
CHMP4A-203ENST00000527154 H2AFB1P0C5Y9 115 aa9.69□□□□□ -0.86
CHMP4A-203ENST00000527154 RPS20P60866 119 aaKnown RBP9.69□□□□□ -0.86
CHMP4A-203ENST00000527154 PHF5AQ7RTV0 110 aaKnown RBP9.69□□□□□ -0.86
CHMP4A-203ENST00000527154 SLC51BQ86UW2 128 aa9.69□□□□□ -0.86
CHMP4A-203ENST00000527154 OR5A1Q8NGJ0 315 aa9.69□□□□□ -0.86
CHMP4A-203ENST00000527154 TEX46H3BTG2 121 aa9.68□□□□□ -0.86
CHMP4A-203ENST00000527154 FGF6P10767 208 aa9.68□□□□□ -0.86
CHMP4A-203ENST00000527154 NTF3P20783 257 aa9.68□□□□□ -0.86
CHMP4A-203ENST00000527154 RPL13AP40429 203 aaKnown RBP9.68□□□□□ -0.86
CHMP4A-203ENST00000527154 GAGE2BQ13066 116 aa9.68□□□□□ -0.86
CHMP4A-203ENST00000527154 CENPWQ5EE01 88 aa9.68□□□□□ -0.86
CHMP4A-203ENST00000527154 NUP35Q8NFH5 326 aa9.68□□□□□ -0.86
CHMP4A-203ENST00000527154 hCG_2014768A0A024R1R8 64 aa9.67□□□□□ -0.86
CHMP4A-203ENST00000527154 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.67□□□□□ -0.86
CHMP4A-203ENST00000527154 XCL1P47992 114 aa9.67□□□□□ -0.86
CHMP4A-203ENST00000527154 CAMPP49913 170 aa9.67□□□□□ -0.86
CHMP4A-203ENST00000527154 MEF2BQ02080 365 aaPredicted RBP9.67□□□□□ -0.86
CHMP4A-203ENST00000527154 KRTAP11-1Q8IUC1 163 aa9.67□□□□□ -0.86
CHMP4A-203ENST00000527154 C11orf52Q96A22 123 aa9.67□□□□□ -0.86
CHMP4A-203ENST00000527154 GNG13Q9P2W3 67 aa9.67□□□□□ -0.86
CHMP4A-203ENST00000527154 LINC00959A0A1B0GUT2 108 aa9.66□□□□□ -0.86
CHMP4A-203ENST00000527154 F2Z2F3 143 aa9.66□□□□□ -0.86
CHMP4A-203ENST00000527154 CCL25O15444 150 aa9.66□□□□□ -0.86
CHMP4A-203ENST00000527154 NCR2O95944 276 aa9.66□□□□□ -0.86
CHMP4A-203ENST00000527154 TRGC1P0CF51 173 aa9.66□□□□□ -0.86
CHMP4A-203ENST00000527154 ZNF25P17030 456 aaPredicted RBP9.66□□□□□ -0.86
CHMP4A-203ENST00000527154 MANBALQ9NQG1 85 aa9.66□□□□□ -0.86
CHMP4A-203ENST00000527154 TRAV1-1A0A0B4J248 108 aa9.65□□□□□ -0.86
CHMP4A-203ENST00000527154 XKRY2A2RUG3 117 aa9.65□□□□□ -0.86
CHMP4A-203ENST00000527154 C19orf71A6NCJ1 209 aa9.65□□□□□ -0.86
CHMP4A-203ENST00000527154 ZNF561-AS1K7EIQ3 104 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms