RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 VCX2Q9H322 139 aa12.74□□□□□ -0.37
USH1C-205ENST00000527020 NIPBLQ6KC79 2804 aaeCLIP12.74□□□□□ -0.37
USH1C-205ENST00000527020 CCL24O00175 119 aa12.73□□□□□ -0.37
USH1C-205ENST00000527020 AZU1P20160 251 aa12.73□□□□□ -0.37
USH1C-205ENST00000527020 SPANXB1Q9NS25 103 aaPredicted RBP12.73□□□□□ -0.37
USH1C-205ENST00000527020 XCL2Q9UBD3 114 aa12.73□□□□□ -0.37
USH1C-205ENST00000527020 RHODO00212 210 aa12.73□□□□□ -0.37
USH1C-205ENST00000527020 CEMP1Q6PRD7 247 aaPredicted RBP12.73□□□□□ -0.37
USH1C-205ENST00000527020 SPXQ9BT56 116 aa12.73□□□□□ -0.37
USH1C-205ENST00000527020 LEPROTO15243 131 aa12.72□□□□□ -0.37
USH1C-205ENST00000527020 IGHV3-53P01767 116 aa12.72□□□□□ -0.37
USH1C-205ENST00000527020 SLC25A29Q8N8R3 303 aa12.72□□□□□ -0.37
USH1C-205ENST00000527020 CHCHD7Q9BUK0 85 aa12.72□□□□□ -0.37
USH1C-205ENST00000527020 C1orf158Q8N1D5 194 aa12.71□□□□□ -0.37
USH1C-205ENST00000527020 RS1O15537 224 aa12.71□□□□□ -0.37
USH1C-205ENST00000527020 IGHV3-30P01768 117 aa12.71□□□□□ -0.37
USH1C-205ENST00000527020 IGHV3-30-5P0DP03 117 aa12.71□□□□□ -0.37
USH1C-205ENST00000527020 CITED2Q99967 270 aaPredicted RBP12.71□□□□□ -0.37
USH1C-205ENST00000527020 TMEM238LA0A1B0GVL6 79 aa12.7□□□□□ -0.38
USH1C-205ENST00000527020 A6NJY4 79 aa12.7□□□□□ -0.38
USH1C-205ENST00000527020 LGALS3P17931 250 aaKnown RBP12.7□□□□□ -0.38
USH1C-205ENST00000527020 PGPEP1Q9NXJ5 209 aa12.7□□□□□ -0.38
USH1C-205ENST00000527020 ACANP16112 2415 aa12.7□□□□□ -0.38
USH1C-205ENST00000527020 VPS25Q9BRG1 176 aa12.7□□□□□ -0.38
USH1C-205ENST00000527020 SETXQ7Z333 2677 aaKnown RBP12.7□□□□□ -0.38
USH1C-205ENST00000527020 ITPR2Q14571 2701 aa12.69□□□□□ -0.38
USH1C-205ENST00000527020 G3V4G9 280 aa12.69□□□□□ -0.38
USH1C-205ENST00000527020 STHQ8IWL8 128 aa12.69□□□□□ -0.38
USH1C-205ENST00000527020 IL17DQ8TAD2 202 aa12.69□□□□□ -0.38
USH1C-205ENST00000527020 IGHV3-64A0A075B6Q5 118 aa12.69□□□□□ -0.38
USH1C-205ENST00000527020 H3BMG7 143 aa12.69□□□□□ -0.38
USH1C-205ENST00000527020 PCP4P48539 62 aa12.69□□□□□ -0.38
USH1C-205ENST00000527020 MRPS36P82909 103 aaKnown RBP12.69□□□□□ -0.38
USH1C-205ENST00000527020 CRYBA4P53673 196 aa12.68□□□□□ -0.38
USH1C-205ENST00000527020 RNASE13Q5GAN3 156 aaKnown RBP12.68□□□□□ -0.38
USH1C-205ENST00000527020 LINC01006Q8NI28 216 aa12.68□□□□□ -0.38
USH1C-205ENST00000527020 UBE2D4Q9Y2X8 147 aa12.68□□□□□ -0.38
USH1C-205ENST00000527020 SETD2Q9BYW2 2564 aaPredicted RBP12.68□□□□□ -0.38
USH1C-205ENST00000527020 DNAJC30Q96LL9 226 aa12.67□□□□□ -0.38
USH1C-205ENST00000527020 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.67□□□□□ -0.38
USH1C-205ENST00000527020 IGHV3-38A0A0C4DH36 116 aa12.67□□□□□ -0.38
USH1C-205ENST00000527020 IGKV2-29A2NJV5 120 aaPredicted RBP12.67□□□□□ -0.38
USH1C-205ENST00000527020 TSPAN13O95857 204 aa12.67□□□□□ -0.38
USH1C-205ENST00000527020 WFDC2Q14508 124 aa12.67□□□□□ -0.38
USH1C-205ENST00000527020 IGHV3OR16-12A0A075B7B8 117 aa12.66□□□□□ -0.38
USH1C-205ENST00000527020 NDUFA11Q86Y39 141 aa12.66□□□□□ -0.38
USH1C-205ENST00000527020 TSSC4Q9Y5U2 329 aaPredicted RBP12.66□□□□□ -0.38
USH1C-205ENST00000527020 APOMO95445 188 aa12.66□□□□□ -0.38
USH1C-205ENST00000527020 RNASE1P07998 156 aaKnown RBP12.66□□□□□ -0.38
USH1C-205ENST00000527020 C16orf95Q9H693 158 aa12.66□□□□□ -0.38
USH1C-205ENST00000527020 YAE1D1Q9NRH1 226 aa12.66□□□□□ -0.38
USH1C-205ENST00000527020 SPANXA1Q9NS26 97 aa12.66□□□□□ -0.38
USH1C-205ENST00000527020 PRO0461Q9UI25 63 aa12.66□□□□□ -0.38
USH1C-205ENST00000527020 F8W1H4 67 aa12.65□□□□□ -0.38
USH1C-205ENST00000527020 CFC1BP0CG36 223 aa12.65□□□□□ -0.38
USH1C-205ENST00000527020 CFC1P0CG37 223 aa12.65□□□□□ -0.38
USH1C-205ENST00000527020 C10orf126Q8N4M7 172 aa12.65□□□□□ -0.38
USH1C-205ENST00000527020 TEX48A0A1B0GUV7 120 aa12.64□□□□□ -0.39
USH1C-205ENST00000527020 IGHV3-30-3P0DP02 117 aa12.64□□□□□ -0.39
USH1C-205ENST00000527020 C21orf62-AS1Q17RA5 79 aa12.64□□□□□ -0.39
USH1C-205ENST00000527020 Q6ZUT4 128 aa12.64□□□□□ -0.39
USH1C-205ENST00000527020 MTORP42345 2549 aa12.64□□□□□ -0.39
USH1C-205ENST00000527020 KMT2BQ9UMN6 2715 aaPredicted RBP12.63□□□□□ -0.39
USH1C-205ENST00000527020 GIG44P09565 113 aaPredicted RBP12.63□□□□□ -0.39
USH1C-205ENST00000527020 RPL24P83731 157 aaKnown RBP12.63□□□□□ -0.39
USH1C-205ENST00000527020 COTL1Q14019 142 aa12.63□□□□□ -0.39
USH1C-205ENST00000527020 MTURNQ8N3F0 131 aa12.63□□□□□ -0.39
USH1C-205ENST00000527020 JMJD1CQ15652 2540 aa12.62□□□□□ -0.39
USH1C-205ENST00000527020 TRGV1A0A0A0MS02 117 aa12.62□□□□□ -0.39
USH1C-205ENST00000527020 TRAV8-3A0A0A6YYJ7 113 aa12.62□□□□□ -0.39
USH1C-205ENST00000527020 EIF4EBP3O60516 100 aaPredicted RBP12.62□□□□□ -0.39
USH1C-205ENST00000527020 UBE2D3P61077 147 aa12.62□□□□□ -0.39
USH1C-205ENST00000527020 UBE2D2P62837 147 aa12.62□□□□□ -0.39
USH1C-205ENST00000527020 TIMM21Q9BVV7 248 aa12.62□□□□□ -0.39
USH1C-205ENST00000527020 TINCRA0A1B0GVN0 87 aa12.62□□□□□ -0.39
USH1C-205ENST00000527020 A0A0J9YXY3 114 aa12.61□□□□□ -0.39
USH1C-205ENST00000527020 GAGE13Q4V321 117 aa12.61□□□□□ -0.39
USH1C-205ENST00000527020 SFTA2Q6UW10 78 aa12.61□□□□□ -0.39
USH1C-205ENST00000527020 Q6ZTI0 123 aa12.61□□□□□ -0.39
USH1C-205ENST00000527020 WFDC10AQ9H1F0 79 aa12.6□□□□□ -0.39
USH1C-205ENST00000527020 ADARB2-AS1A8MUL3 147 aa12.6□□□□□ -0.39
USH1C-205ENST00000527020 PLA2G2AP14555 144 aa12.6□□□□□ -0.39
USH1C-205ENST00000527020 TMEM263Q8WUH6 116 aaKnown RBP12.6□□□□□ -0.39
USH1C-205ENST00000527020 IGHV1-58A0A0C4DH39 117 aa12.59□□□□□ -0.39
USH1C-205ENST00000527020 A4D1N5 150 aa12.59□□□□□ -0.39
USH1C-205ENST00000527020 C19orf73Q9NVV2 129 aa12.59□□□□□ -0.39
USH1C-205ENST00000527020 SH2D6Q7Z4S9 175 aa12.59□□□□□ -0.39
USH1C-205ENST00000527020 LITAFQ99732 161 aa12.59□□□□□ -0.39
USH1C-205ENST00000527020 HELZ2Q9BYK8 2649 aaKnown RBP12.59□□□□□ -0.39
USH1C-205ENST00000527020 LOC107984156A0A0G2JMH3 177 aa12.58□□□□□ -0.4
USH1C-205ENST00000527020 IGLV1-51P01701 117 aa12.58□□□□□ -0.4
USH1C-205ENST00000527020 MUSTN1Q8IVN3 82 aa12.58□□□□□ -0.4
USH1C-205ENST00000527020 ARL17AQ8IVW1 177 aa12.58□□□□□ -0.4
USH1C-205ENST00000527020 ETDBQ3ZM63 59 aa12.57□□□□□ -0.4
USH1C-205ENST00000527020 VSIG2Q96IQ7 327 aa12.57□□□□□ -0.4
USH1C-205ENST00000527020 PRO1854Q9UHT4 67 aa12.57□□□□□ -0.4
USH1C-205ENST00000527020 UNC79Q9P2D8 2635 aa12.57□□□□□ -0.4
USH1C-205ENST00000527020 PLAC8L1A1L4L8 177 aa12.57□□□□□ -0.4
USH1C-205ENST00000527020 A8MZ25 164 aa12.57□□□□□ -0.4
USH1C-205ENST00000527020 TMEM238C9JI98 176 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms