RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 A0A1B0GUV1 79 aa12.14□□□□□ -0.47
TSPAN4-216ENST00000526055 EPM2AB3EWF7 344 aa12.14□□□□□ -0.47
TSPAN4-216ENST00000526055 LECT2O14960 151 aa12.14□□□□□ -0.47
TSPAN4-216ENST00000526055 GAGE6Q13070 117 aa12.14□□□□□ -0.47
TSPAN4-216ENST00000526055 BORCS7Q96B45 105 aa12.14□□□□□ -0.47
TSPAN4-216ENST00000526055 TMEM243Q9BU79 118 aa12.14□□□□□ -0.47
TSPAN4-216ENST00000526055 COTL1Q14019 142 aa12.13□□□□□ -0.47
TSPAN4-216ENST00000526055 GATD1Q8NB37 220 aa12.13□□□□□ -0.47
TSPAN4-216ENST00000526055 TSKUQ8WUA8 353 aa12.13□□□□□ -0.47
TSPAN4-216ENST00000526055 PNRC1Q12796 327 aaPredicted RBP12.12□□□□□ -0.47
TSPAN4-216ENST00000526055 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.11□□□□□ -0.47
TSPAN4-216ENST00000526055 A0A1B0GUT8 65 aa12.1□□□□□ -0.47
TSPAN4-216ENST00000526055 LINC00862A6NCI5 91 aa12.1□□□□□ -0.47
TSPAN4-216ENST00000526055 HIGD1CA8MV81 97 aa12.1□□□□□ -0.47
TSPAN4-216ENST00000526055 NCR2O95944 276 aa12.1□□□□□ -0.47
TSPAN4-216ENST00000526055 Q6ZSA8 131 aa12.1□□□□□ -0.47
TSPAN4-216ENST00000526055 COMMD7Q86VX2 200 aa12.1□□□□□ -0.47
TSPAN4-216ENST00000526055 LINC00269Q8N2A0 174 aa12.1□□□□□ -0.47
TSPAN4-216ENST00000526055 TRAV26-2A0A0B4J265 109 aa12.09□□□□□ -0.47
TSPAN4-216ENST00000526055 UBE2L6O14933 153 aa12.09□□□□□ -0.47
TSPAN4-216ENST00000526055 AMTP48728 403 aa12.09□□□□□ -0.47
TSPAN4-216ENST00000526055 V9GYV3 84 aa12.09□□□□□ -0.47
TSPAN4-216ENST00000526055 TRAV8-4A0A0B4J246 113 aa12.08□□□□□ -0.48
TSPAN4-216ENST00000526055 REG3AQ06141 175 aa12.08□□□□□ -0.48
TSPAN4-216ENST00000526055 TMEM191AQ9H0A3 160 aa12.08□□□□□ -0.48
TSPAN4-216ENST00000526055 TRBV6-5A0A0K0K1A5 114 aa12.07□□□□□ -0.48
TSPAN4-216ENST00000526055 TMEM218A2RU14 115 aa12.07□□□□□ -0.48
TSPAN4-216ENST00000526055 PPP1R2P9O14990 202 aa12.07□□□□□ -0.48
TSPAN4-216ENST00000526055 C20orf203Q8NBC4 194 aa12.07□□□□□ -0.48
TSPAN4-216ENST00000526055 F8W036 122 aa12.06□□□□□ -0.48
TSPAN4-216ENST00000526055 H7C423 109 aa12.06□□□□□ -0.48
TSPAN4-216ENST00000526055 Q5VSD8 79 aa12.06□□□□□ -0.48
TSPAN4-216ENST00000526055 RPL39LQ96EH5 51 aaKnown RBP12.06□□□□□ -0.48
TSPAN4-216ENST00000526055 FAM30AQ9NZY2 134 aa12.06□□□□□ -0.48
TSPAN4-216ENST00000526055 SDHAF1A6NFY7 115 aa12.05□□□□□ -0.48
TSPAN4-216ENST00000526055 USP17L23D6RBM5 183 aa12.05□□□□□ -0.48
TSPAN4-216ENST00000526055 FAM229AH3BQW9 127 aa12.05□□□□□ -0.48
TSPAN4-216ENST00000526055 HLA-DQA1P01909 254 aa12.05□□□□□ -0.48
TSPAN4-216ENST00000526055 RIGQ13278 110 aa12.05□□□□□ -0.48
TSPAN4-216ENST00000526055 KRTAP26-1Q6PEX3 210 aa12.05□□□□□ -0.48
TSPAN4-216ENST00000526055 CLPSL2Q6UWE3 100 aa12.05□□□□□ -0.48
TSPAN4-216ENST00000526055 NAT8BQ9UHF3 227 aa12.05□□□□□ -0.48
TSPAN4-216ENST00000526055 IGLV4-60A0A075B6I1 120 aa12.04□□□□□ -0.48
TSPAN4-216ENST00000526055 MT-ND4LP03901 98 aa12.04□□□□□ -0.48
TSPAN4-216ENST00000526055 MRAP2Q96G30 205 aa12.04□□□□□ -0.48
TSPAN4-216ENST00000526055 SEC11CQ9BY50 192 aa12.04□□□□□ -0.48
TSPAN4-216ENST00000526055 I3L3M4 83 aa12.03□□□□□ -0.48
TSPAN4-216ENST00000526055 APCSP02743 223 aa12.03□□□□□ -0.48
TSPAN4-216ENST00000526055 DGAT2L7PQ6IED9 249 aa12.03□□□□□ -0.48
TSPAN4-216ENST00000526055 CLRN3Q8NCR9 226 aa12.03□□□□□ -0.48
TSPAN4-216ENST00000526055 NUP35Q8NFH5 326 aa12.03□□□□□ -0.48
TSPAN4-216ENST00000526055 ANAPC16Q96DE5 110 aa12.03□□□□□ -0.48
TSPAN4-216ENST00000526055 SMIM27A0A1W2PRY6 76 aa12.02□□□□□ -0.49
TSPAN4-216ENST00000526055 SMR3BP02814 79 aaPredicted RBP12.02□□□□□ -0.49
TSPAN4-216ENST00000526055 ST20Q9HBF5 79 aa12.02□□□□□ -0.49
TSPAN4-216ENST00000526055 PPP1R17O96001 155 aa12.01□□□□□ -0.49
TSPAN4-216ENST00000526055 RAB4AP20338 218 aa12.01□□□□□ -0.49
TSPAN4-216ENST00000526055 PMCHP20382 165 aa12.01□□□□□ -0.49
TSPAN4-216ENST00000526055 HAMPP81172 84 aa12.01□□□□□ -0.49
TSPAN4-216ENST00000526055 DEFB104AQ8WTQ1 72 aa12.01□□□□□ -0.49
TSPAN4-216ENST00000526055 RNF185Q96GF1 192 aa12.01□□□□□ -0.49
TSPAN4-216ENST00000526055 DNAH8Q96JB1 4490 aa12.01□□□□□ -0.49
TSPAN4-216ENST00000526055 ZNF25P17030 456 aaPredicted RBP12□□□□□ -0.49
TSPAN4-216ENST00000526055 ADCYAP1P18509 176 aa12□□□□□ -0.49
TSPAN4-216ENST00000526055 AMMECR1LQ6DCA0 310 aa12□□□□□ -0.49
TSPAN4-216ENST00000526055 FAT1Q14517 4588 aa12□□□□□ -0.49
TSPAN4-216ENST00000526055 VPS13BQ7Z7G8 4022 aa11.99□□□□□ -0.49
TSPAN4-216ENST00000526055 IGLV10-54A0A075B6I4 117 aa11.99□□□□□ -0.49
TSPAN4-216ENST00000526055 TRBV27A0A0K0K1C4 114 aa11.99□□□□□ -0.49
TSPAN4-216ENST00000526055 A0A1B0GW15 77 aa11.99□□□□□ -0.49
TSPAN4-216ENST00000526055 PRSS1P07477 247 aa11.99□□□□□ -0.49
TSPAN4-216ENST00000526055 INAFM2P0DMQ5 153 aa11.99□□□□□ -0.49
TSPAN4-216ENST00000526055 AMN1Q8IY45 258 aa11.99□□□□□ -0.49
TSPAN4-216ENST00000526055 POLR2KP53803 58 aaKnown RBP11.98□□□□□ -0.49
TSPAN4-216ENST00000526055 LINC01620Q4KN68 170 aa11.98□□□□□ -0.49
TSPAN4-216ENST00000526055 CHAC1Q9BUX1 264 aa11.98□□□□□ -0.49
TSPAN4-216ENST00000526055 S100A8P05109 93 aa11.97□□□□□ -0.49
TSPAN4-216ENST00000526055 FGF6P10767 208 aa11.97□□□□□ -0.49
TSPAN4-216ENST00000526055 ESDP10768 282 aa11.97□□□□□ -0.49
TSPAN4-216ENST00000526055 DMBT1Q9UGM3 2413 aaPredicted RBP11.97□□□□□ -0.49
TSPAN4-216ENST00000526055 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.96□□□□□ -0.49
TSPAN4-216ENST00000526055 IGKV2-29A2NJV5 120 aaPredicted RBP11.96□□□□□ -0.49
TSPAN4-216ENST00000526055 GAS8-AS1O95177 125 aa11.96□□□□□ -0.49
TSPAN4-216ENST00000526055 C10orf91Q5T1B1 145 aa11.96□□□□□ -0.49
TSPAN4-216ENST00000526055 RNASEKQ6P5S7 137 aaKnown RBP11.96□□□□□ -0.49
TSPAN4-216ENST00000526055 C9orf163Q8N9P6 203 aa11.96□□□□□ -0.49
TSPAN4-216ENST00000526055 BTF3L4Q96K17 158 aa11.96□□□□□ -0.49
TSPAN4-216ENST00000526055 CTDSP1Q9GZU7 261 aa11.96□□□□□ -0.49
TSPAN4-216ENST00000526055 CARHSP1Q9Y2V2 147 aaKnown RBP11.96□□□□□ -0.49
TSPAN4-216ENST00000526055 VCYO14598 125 aa11.95□□□□□ -0.5
TSPAN4-216ENST00000526055 TSHBP01222 138 aa11.95□□□□□ -0.5
TSPAN4-216ENST00000526055 RPS10P46783 165 aaKnown RBP11.95□□□□□ -0.5
TSPAN4-216ENST00000526055 CNBPP62633 177 aaKnown RBP11.95□□□□□ -0.5
TSPAN4-216ENST00000526055 SCXQ7RTU7 201 aa11.95□□□□□ -0.5
TSPAN4-216ENST00000526055 TMEM101Q96IK0 257 aa11.95□□□□□ -0.5
TSPAN4-216ENST00000526055 PLA2G1BP04054 148 aaKnown RBP11.94□□□□□ -0.5
TSPAN4-216ENST00000526055 NDUFA5Q16718 116 aa11.94□□□□□ -0.5
TSPAN4-216ENST00000526055 FAM104BQ5XKR9 115 aa11.94□□□□□ -0.5
TSPAN4-216ENST00000526055 CFAP161Q6P656 301 aa11.94□□□□□ -0.5
TSPAN4-216ENST00000526055 ATP5L2Q7Z4Y8 100 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms