RNA–Protein interactions for RNA: ENST00000525592.1

TM9SF1-204, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-204ENST00000525592 USP17L23D6RBM5 183 aa13.07□□□□□ -0.32
TM9SF1-204ENST00000525592 FOXA3P55318 350 aaPredicted RBP13.07□□□□□ -0.32
TM9SF1-204ENST00000525592 REG3AQ06141 175 aa13.07□□□□□ -0.32
TM9SF1-204ENST00000525592 LINC01620Q4KN68 170 aa13.07□□□□□ -0.32
TM9SF1-204ENST00000525592 TRAV8-4A0A0B4J246 113 aa13.06□□□□□ -0.32
TM9SF1-204ENST00000525592 TRAV26-2A0A0B4J265 109 aa13.06□□□□□ -0.32
TM9SF1-204ENST00000525592 UBE2L6O14933 153 aa13.06□□□□□ -0.32
TM9SF1-204ENST00000525592 AMTP48728 403 aa13.06□□□□□ -0.32
TM9SF1-204ENST00000525592 LINC01551Q86U37 167 aa13.06□□□□□ -0.32
TM9SF1-204ENST00000525592 C20orf203Q8NBC4 194 aa13.06□□□□□ -0.32
TM9SF1-204ENST00000525592 KRTAP26-1Q6PEX3 210 aa13.05□□□□□ -0.32
TM9SF1-204ENST00000525592 BORCS7Q96B45 105 aa13.05□□□□□ -0.32
TM9SF1-204ENST00000525592 A0A1B0GVG6 124 aa13.04□□□□□ -0.32
TM9SF1-204ENST00000525592 ZNF727A8MUV8 499 aa13.04□□□□□ -0.32
TM9SF1-204ENST00000525592 GFRA4Q9GZZ7 299 aa13.04□□□□□ -0.32
TM9SF1-204ENST00000525592 IGLV4-60A0A075B6I1 120 aa13.03□□□□□ -0.32
TM9SF1-204ENST00000525592 FAM231BA6NCW3 169 aa13.03□□□□□ -0.32
TM9SF1-204ENST00000525592 NCR2O95944 276 aa13.03□□□□□ -0.32
TM9SF1-204ENST00000525592 SRP19P09132 144 aaKnown RBP13.03□□□□□ -0.32
TM9SF1-204ENST00000525592 DGAT2L7PQ6IED9 249 aa13.03□□□□□ -0.32
TM9SF1-204ENST00000525592 SCXQ7RTU7 201 aa13.03□□□□□ -0.32
TM9SF1-204ENST00000525592 TSKUQ8WUA8 353 aa13.03□□□□□ -0.32
TM9SF1-204ENST00000525592 CHAC1Q9BUX1 264 aa13.03□□□□□ -0.32
TM9SF1-204ENST00000525592 OSTCQ9NRP0 149 aa13.03□□□□□ -0.32
TM9SF1-204ENST00000525592 MYCBP2O75592 4640 aa13.03□□□□□ -0.32
TM9SF1-204ENST00000525592 DMBT1Q9UGM3 2413 aaPredicted RBP13.02□□□□□ -0.32
TM9SF1-204ENST00000525592 PLA2G1BP04054 148 aaKnown RBP13.02□□□□□ -0.33
TM9SF1-204ENST00000525592 RPL39LQ96EH5 51 aaKnown RBP13.02□□□□□ -0.33
TM9SF1-204ENST00000525592 IGLV10-54A0A075B6I4 117 aa13.01□□□□□ -0.33
TM9SF1-204ENST00000525592 A0A1B0GUT8 65 aa13.01□□□□□ -0.33
TM9SF1-204ENST00000525592 HIGD1CA8MV81 97 aa13.01□□□□□ -0.33
TM9SF1-204ENST00000525592 PRSS1P07477 247 aa13.01□□□□□ -0.33
TM9SF1-204ENST00000525592 LINC00528Q8N1L1 170 aa13.01□□□□□ -0.33
TM9SF1-204ENST00000525592 CLRN3Q8NCR9 226 aa13.01□□□□□ -0.33
TM9SF1-204ENST00000525592 FAM74A3Q4VXF1 159 aa13□□□□□ -0.33
TM9SF1-204ENST00000525592 DEFB104AQ8WTQ1 72 aa13□□□□□ -0.33
TM9SF1-204ENST00000525592 FLG2Q5D862 2391 aaPredicted RBP12.99□□□□□ -0.33
TM9SF1-204ENST00000525592 TRBV6-5A0A0K0K1A5 114 aa12.99□□□□□ -0.33
TM9SF1-204ENST00000525592 SDHAF1A6NFY7 115 aa12.99□□□□□ -0.33
TM9SF1-204ENST00000525592 H7C423 109 aa12.99□□□□□ -0.33
TM9SF1-204ENST00000525592 APCSP02743 223 aa12.99□□□□□ -0.33
TM9SF1-204ENST00000525592 TMEM191AQ9H0A3 160 aa12.99□□□□□ -0.33
TM9SF1-204ENST00000525592 C9orf163Q8N9P6 203 aa12.97□□□□□ -0.33
TM9SF1-204ENST00000525592 CIRBP-AS1Q8TBR5 109 aa12.97□□□□□ -0.33
TM9SF1-204ENST00000525592 I3L3M4 83 aa12.96□□□□□ -0.33
TM9SF1-204ENST00000525592 TMEM241Q24JQ0 296 aa12.96□□□□□ -0.33
TM9SF1-204ENST00000525592 AMMECR1LQ6DCA0 310 aa12.96□□□□□ -0.33
TM9SF1-204ENST00000525592 ISOC2Q96AB3 205 aa12.96□□□□□ -0.33
TM9SF1-204ENST00000525592 V9GYV3 84 aa12.96□□□□□ -0.33
TM9SF1-204ENST00000525592 HERC1Q15751 4861 aa12.95□□□□□ -0.34
TM9SF1-204ENST00000525592 CNBPP62633 177 aaKnown RBP12.95□□□□□ -0.34
TM9SF1-204ENST00000525592 MRAP2Q96G30 205 aa12.95□□□□□ -0.34
TM9SF1-204ENST00000525592 ST20Q9HBF5 79 aa12.95□□□□□ -0.34
TM9SF1-204ENST00000525592 ZNF25P17030 456 aaPredicted RBP12.94□□□□□ -0.34
TM9SF1-204ENST00000525592 PMCHP20382 165 aa12.94□□□□□ -0.34
TM9SF1-204ENST00000525592 RIGQ13278 110 aa12.94□□□□□ -0.34
TM9SF1-204ENST00000525592 SMDT1Q9H4I9 107 aa12.94□□□□□ -0.34
TM9SF1-204ENST00000525592 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.93□□□□□ -0.34
TM9SF1-204ENST00000525592 hDV102S1A0JD36 115 aa12.93□□□□□ -0.34
TM9SF1-204ENST00000525592 IGKV2-29A2NJV5 120 aaPredicted RBP12.93□□□□□ -0.34
TM9SF1-204ENST00000525592 FGF6P10767 208 aa12.93□□□□□ -0.34
TM9SF1-204ENST00000525592 RAB4AP20338 218 aa12.93□□□□□ -0.34
TM9SF1-204ENST00000525592 RPL23P62829 140 aaKnown RBP12.93□□□□□ -0.34
TM9SF1-204ENST00000525592 RNASEKQ6P5S7 137 aaKnown RBP12.93□□□□□ -0.34
TM9SF1-204ENST00000525592 NUP35Q8NFH5 326 aa12.93□□□□□ -0.34
TM9SF1-204ENST00000525592 RNF185Q96GF1 192 aa12.93□□□□□ -0.34
TM9SF1-204ENST00000525592 NAT8Q9UHE5 227 aa12.93□□□□□ -0.34
TM9SF1-204ENST00000525592 PEA15Q15121 130 aa12.92□□□□□ -0.34
TM9SF1-204ENST00000525592 AP5S1Q9NUS5 200 aa12.92□□□□□ -0.34
TM9SF1-204ENST00000525592 NAT8BQ9UHF3 227 aa12.92□□□□□ -0.34
TM9SF1-204ENST00000525592 GAS8-AS1O95177 125 aa12.91□□□□□ -0.34
TM9SF1-204ENST00000525592 ADIRFQ15847 76 aa12.91□□□□□ -0.34
TM9SF1-204ENST00000525592 AMN1Q8IY45 258 aa12.91□□□□□ -0.34
TM9SF1-204ENST00000525592 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.9□□□□□ -0.34
TM9SF1-204ENST00000525592 TRBV27A0A0K0K1C4 114 aa12.9□□□□□ -0.34
TM9SF1-204ENST00000525592 C9JQL5 133 aa12.9□□□□□ -0.34
TM9SF1-204ENST00000525592 PPP1R17O96001 155 aa12.9□□□□□ -0.34
TM9SF1-204ENST00000525592 TSHBP01222 138 aa12.9□□□□□ -0.34
TM9SF1-204ENST00000525592 ESDP10768 282 aa12.9□□□□□ -0.34
TM9SF1-204ENST00000525592 POLR2KP53803 58 aaKnown RBP12.9□□□□□ -0.34
TM9SF1-204ENST00000525592 CFAP161Q6P656 301 aa12.9□□□□□ -0.34
TM9SF1-204ENST00000525592 BTF3L4Q96K17 158 aa12.9□□□□□ -0.34
TM9SF1-204ENST00000525592 IGKV3OR2-268A0A0C4DH90 116 aa12.89□□□□□ -0.35
TM9SF1-204ENST00000525592 GAGE12HA6NDE8 117 aa12.89□□□□□ -0.35
TM9SF1-204ENST00000525592 RPS10P46783 165 aaKnown RBP12.89□□□□□ -0.35
TM9SF1-204ENST00000525592 SDIM1Q6ZPB5 146 aa12.89□□□□□ -0.35
TM9SF1-204ENST00000525592 TMEM101Q96IK0 257 aa12.89□□□□□ -0.35
TM9SF1-204ENST00000525592 TMEM242Q9NWH2 141 aa12.89□□□□□ -0.35
TM9SF1-204ENST00000525592 CHCHD10Q8WYQ3 142 aaPredicted RBP12.88□□□□□ -0.35
TM9SF1-204ENST00000525592 SMIM27A0A1W2PRY6 76 aa12.87□□□□□ -0.35
TM9SF1-204ENST00000525592 SRSF3P84103 164 aaKnown RBP12.87□□□□□ -0.35
TM9SF1-204ENST00000525592 C15orf56Q8N910 161 aa12.87□□□□□ -0.35
TM9SF1-204ENST00000525592 OR5A1Q8NGJ0 315 aa12.87□□□□□ -0.35
TM9SF1-204ENST00000525592 IGHV3-64A0A075B6Q5 118 aa12.86□□□□□ -0.35
TM9SF1-204ENST00000525592 A0A1B0GW15 77 aa12.86□□□□□ -0.35
TM9SF1-204ENST00000525592 KRTAP10-4P60372 401 aaPredicted RBP12.86□□□□□ -0.35
TM9SF1-204ENST00000525592 MRPL52Q86TS9 123 aaKnown RBP12.86□□□□□ -0.35
TM9SF1-204ENST00000525592 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.86□□□□□ -0.35
TM9SF1-204ENST00000525592 C7orf77A4D0Y5 90 aa12.85□□□□□ -0.35
TM9SF1-204ENST00000525592 VCYO14598 125 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms