RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 CFHR3Q02985 330 aa6.41□□□□□ -1.38
CTNNA1-223ENST00000520520 ZNF876PQ49A33 203 aa6.41□□□□□ -1.38
CTNNA1-223ENST00000520520 TMEM170BQ5T4T1 132 aa6.41□□□□□ -1.38
CTNNA1-223ENST00000520520 LCNL1Q6ZST4 164 aa6.41□□□□□ -1.38
CTNNA1-223ENST00000520520 NFE4Q86UQ8 179 aa6.41□□□□□ -1.38
CTNNA1-223ENST00000520520 C9orf85Q96MD7 179 aa6.41□□□□□ -1.38
CTNNA1-223ENST00000520520 MDFICQ9P1T7 246 aa6.41□□□□□ -1.38
CTNNA1-223ENST00000520520 LINC00527Q9UJ94 153 aa6.41□□□□□ -1.38
CTNNA1-223ENST00000520520 IGLV4-69A0A075B6H9 119 aa6.4□□□□□ -1.38
CTNNA1-223ENST00000520520 IGHV1OR15-1A0A075B7D0 117 aa6.4□□□□□ -1.38
CTNNA1-223ENST00000520520 IGHV3-16A0A0C4DH30 117 aa6.4□□□□□ -1.38
CTNNA1-223ENST00000520520 LOC107984156A0A0G2JMH3 177 aa6.4□□□□□ -1.38
CTNNA1-223ENST00000520520 A0A0J9YY99 117 aa6.4□□□□□ -1.38
CTNNA1-223ENST00000520520 J3QQQ9 107 aa6.4□□□□□ -1.38
CTNNA1-223ENST00000520520 LEPROTO15243 131 aa6.4□□□□□ -1.38
CTNNA1-223ENST00000520520 TSPAN13O95857 204 aa6.4□□□□□ -1.38
CTNNA1-223ENST00000520520 CRYBA4P53673 196 aa6.4□□□□□ -1.38
CTNNA1-223ENST00000520520 WFDC2Q14508 124 aa6.4□□□□□ -1.38
CTNNA1-223ENST00000520520 MORN3Q6PF18 240 aaPredicted RBP6.4□□□□□ -1.38
CTNNA1-223ENST00000520520 ARL17AQ8IVW1 177 aa6.4□□□□□ -1.38
CTNNA1-223ENST00000520520 PPDPFLQ8WWR9 84 aa6.4□□□□□ -1.38
CTNNA1-223ENST00000520520 C16orf95Q9H693 158 aa6.4□□□□□ -1.38
CTNNA1-223ENST00000520520 EDA2RQ9HAV5 297 aa6.4□□□□□ -1.38
CTNNA1-223ENST00000520520 PRO0461Q9UI25 63 aa6.4□□□□□ -1.38
CTNNA1-223ENST00000520520 IGKV3-7A0A075B6H7 116 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 TRAV12-3A0A0B4J271 114 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 A0A0J9YX75 114 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 A8MWV9 139 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 F6UB75 175 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 I3L3M4 83 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 M0QXV9 152 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 CIDEAO60543 219 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 AZU1P20160 251 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 PSMB2P49721 201 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 LINC00315P59091 139 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 UBE2D3P61077 147 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 UBE2D2P62837 147 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 ETDBQ3ZM63 59 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 TCTEX1D4Q5JR98 221 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 CFAP126Q5VTH2 177 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 Q6ZQT7 251 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 C10orf126Q8N4M7 172 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 SLC25A29Q8N8R3 303 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 DCANP1Q8TF63 244 aa6.39□□□□□ -1.39
CTNNA1-223ENST00000520520 A0A087WWL8 130 aa6.38□□□□□ -1.39
CTNNA1-223ENST00000520520 A0A0B4J2C4 111 aa6.38□□□□□ -1.39
CTNNA1-223ENST00000520520 PIK3CD-AS1Q5SR53 167 aa6.38□□□□□ -1.39
CTNNA1-223ENST00000520520 FAM74A4Q5TZK3 123 aa6.38□□□□□ -1.39
CTNNA1-223ENST00000520520 TEN1Q86WV5 123 aa6.38□□□□□ -1.39
CTNNA1-223ENST00000520520 NDUFA11Q86Y39 141 aa6.38□□□□□ -1.39
CTNNA1-223ENST00000520520 RNF152Q8N8N0 203 aa6.38□□□□□ -1.39
CTNNA1-223ENST00000520520 PRO1854Q9UHT4 67 aa6.38□□□□□ -1.39
CTNNA1-223ENST00000520520 ZNF256Q9Y2P7 627 aaPredicted RBP6.38□□□□□ -1.39
CTNNA1-223ENST00000520520 TRAV2A0A0B4J234 112 aa6.37□□□□□ -1.39
CTNNA1-223ENST00000520520 A0A1W2PRX2 142 aa6.37□□□□□ -1.39
CTNNA1-223ENST00000520520 TMEM262E9PQX1 116 aa6.37□□□□□ -1.39
CTNNA1-223ENST00000520520 K7EQG2 157 aa6.37□□□□□ -1.39
CTNNA1-223ENST00000520520 M0QY20 66 aa6.37□□□□□ -1.39
CTNNA1-223ENST00000520520 TSHBP01222 138 aa6.37□□□□□ -1.39
CTNNA1-223ENST00000520520 IGHV3-30P01768 117 aa6.37□□□□□ -1.39
CTNNA1-223ENST00000520520 CRYGDP07320 174 aa6.37□□□□□ -1.39
CTNNA1-223ENST00000520520 ZNF688P0C7X2 276 aa6.37□□□□□ -1.39
CTNNA1-223ENST00000520520 SCGB1C2P0DMR2 95 aa6.37□□□□□ -1.39
CTNNA1-223ENST00000520520 IGHV3-30-5P0DP03 117 aa6.37□□□□□ -1.39
CTNNA1-223ENST00000520520 PSMB8P28062 276 aa6.37□□□□□ -1.39
CTNNA1-223ENST00000520520 FOXI1Q12951 378 aa6.37□□□□□ -1.39
CTNNA1-223ENST00000520520 AMTNQ6UX39 209 aa6.37□□□□□ -1.39
CTNNA1-223ENST00000520520 SPAG8Q99932 426 aaPredicted RBP6.37□□□□□ -1.39
CTNNA1-223ENST00000520520 GTSF1LQ9H1H1 148 aa6.37□□□□□ -1.39
CTNNA1-223ENST00000520520 SELENOKQ9Y6D0 94 aa6.37□□□□□ -1.39
CTNNA1-223ENST00000520520 TMEM223A0PJW6 202 aa6.36□□□□□ -1.39
CTNNA1-223ENST00000520520 RHODO00212 210 aa6.36□□□□□ -1.39
CTNNA1-223ENST00000520520 ELANEP08246 267 aa6.36□□□□□ -1.39
CTNNA1-223ENST00000520520 P0DMU3 169 aa6.36□□□□□ -1.39
CTNNA1-223ENST00000520520 FAM231AP0DMU4 169 aa6.36□□□□□ -1.39
CTNNA1-223ENST00000520520 FAM231CP0DMU5 169 aa6.36□□□□□ -1.39
CTNNA1-223ENST00000520520 CD28P10747 220 aa6.36□□□□□ -1.39
CTNNA1-223ENST00000520520 ZNF415Q09FC8 603 aa6.36□□□□□ -1.39
CTNNA1-223ENST00000520520 SMAGPQ0VAQ4 97 aa6.36□□□□□ -1.39
CTNNA1-223ENST00000520520 C20orf203Q8NBC4 194 aa6.36□□□□□ -1.39
CTNNA1-223ENST00000520520 PYGO1Q9Y3Y4 419 aa6.36□□□□□ -1.39
CTNNA1-223ENST00000520520 NBEAL2Q6ZNJ1 2754 aa6.35□□□□□ -1.39
CTNNA1-223ENST00000520520 M0R2P5 195 aa6.35□□□□□ -1.39
CTNNA1-223ENST00000520520 DEFB1P60022 68 aa6.35□□□□□ -1.39
CTNNA1-223ENST00000520520 RPL39P62891 51 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-223ENST00000520520 ATXN8Q156A1 80 aa6.35□□□□□ -1.39
CTNNA1-223ENST00000520520 DEFB121Q5J5C9 76 aa6.35□□□□□ -1.39
CTNNA1-223ENST00000520520 KPRPQ5T749 579 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-223ENST00000520520 SH2D6Q7Z4S9 175 aa6.35□□□□□ -1.39
CTNNA1-223ENST00000520520 Q8N1Y9 231 aa6.35□□□□□ -1.39
CTNNA1-223ENST00000520520 COPS9Q8WXC6 57 aa6.35□□□□□ -1.39
CTNNA1-223ENST00000520520 PTH2Q96A98 100 aa6.35□□□□□ -1.39
CTNNA1-223ENST00000520520 TIMM21Q9BVV7 248 aa6.35□□□□□ -1.39
CTNNA1-223ENST00000520520 SPANXA1Q9NS26 97 aa6.35□□□□□ -1.39
CTNNA1-223ENST00000520520 ERG28Q9UKR5 140 aa6.35□□□□□ -1.39
CTNNA1-223ENST00000520520 BLCAPP62952 87 aa6.34□□□□□ -1.39
CTNNA1-223ENST00000520520 Q1RN00 199 aa6.34□□□□□ -1.39
CTNNA1-223ENST00000520520 SBSPONQ8IVN8 264 aa6.34□□□□□ -1.39
CTNNA1-223ENST00000520520 KLHL30-AS1Q8NEE0 82 aa6.34□□□□□ -1.39
CTNNA1-223ENST00000520520 DNAJC30Q96LL9 226 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms