RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 I3L3M4 83 aa5.69□□□□□ -1.5
CLK4-203ENST00000519583 COX8AP10176 69 aa5.69□□□□□ -1.5
CLK4-203ENST00000519583 NEXN-AS1Q8NBZ9 246 aa5.69□□□□□ -1.5
CLK4-203ENST00000519583 NOP10Q9NPE3 64 aaKnown RBP5.69□□□□□ -1.5
CLK4-203ENST00000519583 NBEAL2Q6ZNJ1 2754 aa5.69□□□□□ -1.5
CLK4-203ENST00000519583 G0S2P27469 103 aa5.69□□□□□ -1.5
CLK4-203ENST00000519583 RHOHQ15669 191 aa5.69□□□□□ -1.5
CLK4-203ENST00000519583 MRPL52Q86TS9 123 aaKnown RBP5.69□□□□□ -1.5
CLK4-203ENST00000519583 HHLA3Q9XRX5 114 aa5.69□□□□□ -1.5
CLK4-203ENST00000519583 MRPS16Q9Y3D3 137 aaKnown RBP5.69□□□□□ -1.5
CLK4-203ENST00000519583 TNFRSF18Q9Y5U5 241 aa5.69□□□□□ -1.5
CLK4-203ENST00000519583 TRAV12-1A0A0B4J245 112 aa5.68□□□□□ -1.5
CLK4-203ENST00000519583 PLAC8L1A1L4L8 177 aa5.68□□□□□ -1.5
CLK4-203ENST00000519583 IGIPA6NJ69 53 aa5.68□□□□□ -1.5
CLK4-203ENST00000519583 IGHV3-53P01767 116 aa5.68□□□□□ -1.5
CLK4-203ENST00000519583 LBHQ53QV2 105 aaPredicted RBP5.68□□□□□ -1.5
CLK4-203ENST00000519583 OR4C5Q8NGB2 326 aa5.68□□□□□ -1.5
CLK4-203ENST00000519583 C16orf74Q96GX8 76 aa5.68□□□□□ -1.5
CLK4-203ENST00000519583 COL7A1Q02388 2944 aa5.68□□□□□ -1.5
CLK4-203ENST00000519583 NMUP48645 174 aa5.68□□□□□ -1.5
CLK4-203ENST00000519583 RRN3P1Q2M238 152 aa5.68□□□□□ -1.5
CLK4-203ENST00000519583 ZNF479Q96JC4 524 aa5.68□□□□□ -1.5
CLK4-203ENST00000519583 OVOL2Q9BRP0 275 aa5.68□□□□□ -1.5
CLK4-203ENST00000519583 CHTOPQ9Y3Y2 248 aaKnown RBP5.68□□□□□ -1.5
CLK4-203ENST00000519583 TENM3Q9P273 2699 aa5.68□□□□□ -1.5
CLK4-203ENST00000519583 NACAE9PAV3 2078 aa5.68□□□□□ -1.5
CLK4-203ENST00000519583 A0A1B0GV90 55 aa5.68□□□□□ -1.5
CLK4-203ENST00000519583 PRSS29PA6NIE9 313 aa5.68□□□□□ -1.5
CLK4-203ENST00000519583 F8VRH5 84 aa5.68□□□□□ -1.5
CLK4-203ENST00000519583 FGF6P10767 208 aa5.68□□□□□ -1.5
CLK4-203ENST00000519583 ZC2HC1BQ5TFG8 222 aa5.68□□□□□ -1.5
CLK4-203ENST00000519583 HINT1P49773 126 aaPredicted RBP5.67□□□□□ -1.5
CLK4-203ENST00000519583 STAB2Q8WWQ8 2551 aa5.67□□□□□ -1.5
CLK4-203ENST00000519583 IGKV2D-26A0A0A0MRZ7 120 aa5.67□□□□□ -1.5
CLK4-203ENST00000519583 PLNP26678 52 aa5.67□□□□□ -1.5
CLK4-203ENST00000519583 DAZ2Q13117 558 aaKnown RBP5.67□□□□□ -1.5
CLK4-203ENST00000519583 PCP2Q8IVA1 136 aa5.67□□□□□ -1.5
CLK4-203ENST00000519583 RNF183Q96D59 192 aa5.67□□□□□ -1.5
CLK4-203ENST00000519583 GAGE12BA1L429 117 aa5.67□□□□□ -1.5
CLK4-203ENST00000519583 LINC01549A6NIU2 74 aa5.67□□□□□ -1.5
CLK4-203ENST00000519583 GAGE7O76087 117 aa5.67□□□□□ -1.5
CLK4-203ENST00000519583 GAGE12FP0CL80 117 aa5.67□□□□□ -1.5
CLK4-203ENST00000519583 GAGE12GP0CL81 117 aa5.67□□□□□ -1.5
CLK4-203ENST00000519583 GAGE12IP0CL82 117 aa5.67□□□□□ -1.5
CLK4-203ENST00000519583 C20orf203Q8NBC4 194 aa5.67□□□□□ -1.5
CLK4-203ENST00000519583 TMEM141Q96I45 108 aa5.67□□□□□ -1.5
CLK4-203ENST00000519583 TIMM17AQ99595 171 aa5.67□□□□□ -1.5
CLK4-203ENST00000519583 TRAV4A0A0B4J268 109 aa5.66□□□□□ -1.5
CLK4-203ENST00000519583 IGHV3-38A0A0C4DH36 116 aa5.66□□□□□ -1.5
CLK4-203ENST00000519583 C2orf91Q6ZV80 131 aa5.66□□□□□ -1.5
CLK4-203ENST00000519583 PHLDA1Q8WV24 401 aaPredicted RBP5.66□□□□□ -1.5
CLK4-203ENST00000519583 OPRPNQ99935 248 aaPredicted RBP5.66□□□□□ -1.5
CLK4-203ENST00000519583 EMP1P54849 157 aa5.66□□□□□ -1.5
CLK4-203ENST00000519583 BOD1L2Q8IYS8 172 aa5.66□□□□□ -1.5
CLK4-203ENST00000519583 WWC2-AS2Q96NR7 200 aa5.66□□□□□ -1.5
CLK4-203ENST00000519583 TTTY13Q9BZ97 58 aa5.66□□□□□ -1.5
CLK4-203ENST00000519583 PMVKQ15126 192 aa5.65□□□□□ -1.5
CLK4-203ENST00000519583 DNAJC30Q96LL9 226 aa5.65□□□□□ -1.5
CLK4-203ENST00000519583 TRGV2A0A075B6R0 118 aa5.65□□□□□ -1.5
CLK4-203ENST00000519583 OR11H2Q8NH07 326 aa5.65□□□□□ -1.5
CLK4-203ENST00000519583 CST9LQ9H4G1 147 aa5.65□□□□□ -1.5
CLK4-203ENST00000519583 MPV17L2Q567V2 206 aa5.65□□□□□ -1.51
CLK4-203ENST00000519583 ZNRF2Q8NHG8 242 aa5.65□□□□□ -1.51
CLK4-203ENST00000519583 K7EQD1 137 aa5.64□□□□□ -1.51
CLK4-203ENST00000519583 IGLV4-69A0A075B6H9 119 aa5.64□□□□□ -1.51
CLK4-203ENST00000519583 CHCHD7Q9BUK0 85 aa5.64□□□□□ -1.51
CLK4-203ENST00000519583 C11orf86A6NJI1 115 aa5.64□□□□□ -1.51
CLK4-203ENST00000519583 DLEU1O43261 78 aa5.64□□□□□ -1.51
CLK4-203ENST00000519583 COTL1Q14019 142 aa5.64□□□□□ -1.51
CLK4-203ENST00000519583 COL5A1-AS1Q5SY13 56 aa5.64□□□□□ -1.51
CLK4-203ENST00000519583 SLC25A29Q8N8R3 303 aa5.64□□□□□ -1.51
CLK4-203ENST00000519583 IGLV4-3A0A075B6K6 122 aa5.63□□□□□ -1.51
CLK4-203ENST00000519583 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.63□□□□□ -1.51
CLK4-203ENST00000519583 A0A0J9YWU9 116 aa5.63□□□□□ -1.51
CLK4-203ENST00000519583 IGKV2-29A2NJV5 120 aaPredicted RBP5.63□□□□□ -1.51
CLK4-203ENST00000519583 CEMP1Q6PRD7 247 aaPredicted RBP5.63□□□□□ -1.51
CLK4-203ENST00000519583 X6R8D5 127 aa5.63□□□□□ -1.51
CLK4-203ENST00000519583 TRBV7-3A0A075B6L6 115 aa5.63□□□□□ -1.51
CLK4-203ENST00000519583 TRAV8-6A0A0B4J262 113 aa5.63□□□□□ -1.51
CLK4-203ENST00000519583 GAGE12JA6NER3 117 aa5.63□□□□□ -1.51
CLK4-203ENST00000519583 GAGE1Q13065 139 aa5.63□□□□□ -1.51
CLK4-203ENST00000519583 GAGE4Q13068 117 aa5.63□□□□□ -1.51
CLK4-203ENST00000519583 GAGE5Q13069 117 aa5.63□□□□□ -1.51
CLK4-203ENST00000519583 GAGE13Q4V321 117 aa5.63□□□□□ -1.51
CLK4-203ENST00000519583 TRBV10-1A0A0K0K1A3 114 aa5.62□□□□□ -1.51
CLK4-203ENST00000519583 RPL36AP83881 106 aaKnown RBP5.62□□□□□ -1.51
CLK4-203ENST00000519583 BVES-AS1Q5T3Y7 98 aa5.62□□□□□ -1.51
CLK4-203ENST00000519583 RPL36ALQ969Q0 106 aaKnown RBP5.62□□□□□ -1.51
CLK4-203ENST00000519583 DEFB4AO15263 64 aa5.62□□□□□ -1.51
CLK4-203ENST00000519583 TMEM97Q5BJF2 176 aa5.62□□□□□ -1.51
CLK4-203ENST00000519583 MAPKAPK5-AS1Q8N8E1 139 aa5.62□□□□□ -1.51
CLK4-203ENST00000519583 TRGV4A0A0C4DH28 118 aa5.62□□□□□ -1.51
CLK4-203ENST00000519583 DEFB130BP0DP73 79 aa5.62□□□□□ -1.51
CLK4-203ENST00000519583 DEFB130AP0DP74 79 aa5.62□□□□□ -1.51
CLK4-203ENST00000519583 FAM104AQ969W3 186 aa5.62□□□□□ -1.51
CLK4-203ENST00000519583 VCX2Q9H322 139 aa5.62□□□□□ -1.51
CLK4-203ENST00000519583 LOC100131303A0A0U1RQF7 123 aa5.61□□□□□ -1.51
CLK4-203ENST00000519583 RNASE13Q5GAN3 156 aaKnown RBP5.61□□□□□ -1.51
CLK4-203ENST00000519583 PYGO1Q9Y3Y4 419 aa5.61□□□□□ -1.51
CLK4-203ENST00000519583 IGHV4-28A0A0C4DH34 117 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms