RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 IMUPQ9GZP8 106 aa0.41□□□□□ -2.34
SKP1-205ENST00000519054 BCL2L10Q9HD36 194 aa0.41□□□□□ -2.34
SKP1-205ENST00000519054 NHP2Q9NX24 153 aaKnown RBP0.41□□□□□ -2.34
SKP1-205ENST00000519054 SLC35A3Q9Y2D2 325 aa0.41□□□□□ -2.34
SKP1-205ENST00000519054 LOC285095A0A1B0GVY8 99 aa0.4□□□□□ -2.35
SKP1-205ENST00000519054 ZNF736B4DX44 427 aaPredicted RBP0.4□□□□□ -2.35
SKP1-205ENST00000519054 PPP5D1E7EU14 171 aa0.4□□□□□ -2.35
SKP1-205ENST00000519054 CYB5BO43169 146 aa0.4□□□□□ -2.35
SKP1-205ENST00000519054 MFSD11O43934 449 aa0.4□□□□□ -2.35
SKP1-205ENST00000519054 ATP5G3P48201 142 aa0.4□□□□□ -2.35
SKP1-205ENST00000519054 CAV3P56539 151 aa0.4□□□□□ -2.35
SKP1-205ENST00000519054 PIGPP57054 158 aa0.4□□□□□ -2.35
SKP1-205ENST00000519054 TMED2Q15363 201 aa0.4□□□□□ -2.35
SKP1-205ENST00000519054 TAF1AQ15573 450 aaPredicted RBP0.4□□□□□ -2.35
SKP1-205ENST00000519054 RRN3P1Q2M238 152 aa0.4□□□□□ -2.35
SKP1-205ENST00000519054 TDRG1Q3Y452 100 aa0.4□□□□□ -2.35
SKP1-205ENST00000519054 Q5VV11 94 aa0.4□□□□□ -2.35
SKP1-205ENST00000519054 S100A7AQ86SG5 101 aa0.4□□□□□ -2.35
SKP1-205ENST00000519054 DGCR14Q96DF8 476 aaKnown RBP0.4□□□□□ -2.35
SKP1-205ENST00000519054 ZC2HC1AQ96GY0 325 aa0.4□□□□□ -2.35
SKP1-205ENST00000519054 LINC00467Q9BRT7 94 aa0.4□□□□□ -2.35
SKP1-205ENST00000519054 PRADC1Q9BSG0 188 aa0.4□□□□□ -2.35
SKP1-205ENST00000519054 FAM103A1Q9BTL3 118 aaKnown RBP0.4□□□□□ -2.35
SKP1-205ENST00000519054 SNRNP25Q9BV90 132 aaKnown RBP0.4□□□□□ -2.35
SKP1-205ENST00000519054 TRBV19A0A075B6N1 114 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 TMEM189A5PLL7 270 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 TMEM210A6NLX4 147 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 M0R378 163 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 GADD45GO95257 159 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 ROMO1P60602 79 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 SNRPFP62306 86 aaKnown RBP0.39□□□□□ -2.35
SKP1-205ENST00000519054 LIN52Q52LA3 116 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 GDF5OSQ5U4N7 250 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 KRTAP26-1Q6PEX3 210 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 SOSTDC1Q6X4U4 206 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 C3orf62Q6ZUJ4 267 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 CLECL1Q8IZS7 167 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 LRRC18Q8N456 261 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 FAM24BQ8N5W8 94 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 Q8N6K4 173 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 LINC00301Q8NCQ3 95 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 OR10K1Q8NGX5 313 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 OR10X1Q8NGY0 326 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 OR2T10Q8NGZ9 312 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 GNPDA2Q8TDQ7 276 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 DIRC1Q969H9 104 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 MRPL57Q9BQC6 102 aaKnown RBP0.39□□□□□ -2.35
SKP1-205ENST00000519054 AIF1LQ9BQI0 150 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 PCBD2Q9H0N5 130 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 CDC42SE1Q9NRR8 79 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 ACER3Q9NUN7 267 aa0.39□□□□□ -2.35
SKP1-205ENST00000519054 CCDC160A6NGH7 325 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 J3QRK9 145 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 CCL25O15444 150 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 PROSCO94903 275 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 IGHV3-30P01768 117 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 IGHV3-33P01772 117 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 IGHV3-30-5P0DP03 117 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 ZNF25P17030 456 aaPredicted RBP0.38□□□□□ -2.35
SKP1-205ENST00000519054 RPS3P23396 243 aaKnown RBP eCLIP0.38□□□□□ -2.352e-11■■□□□ 12.7
SKP1-205ENST00000519054 HSD11B1P28845 292 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 ERP29P30040 261 aaKnown RBP0.38□□□□□ -2.35
SKP1-205ENST00000519054 DEFB131AP59861 70 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 HSPE1P61604 102 aaKnown RBP0.38□□□□□ -2.35
SKP1-205ENST00000519054 HAGHLQ6PII5 290 aaPredicted RBP0.38□□□□□ -2.35
SKP1-205ENST00000519054 UNQ5815/PRO19632Q6UWF5 114 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 TEX261Q6UWH6 196 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 LYPD5Q6UWN5 251 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 GOLT1AQ6ZVE7 132 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 C4orf33Q8N1A6 199 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 EXOC3-AS1Q8N2X6 119 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 AMELYQ99218 206 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 NMNAT1Q9HAN9 279 aaPredicted RBP0.38□□□□□ -2.35
SKP1-205ENST00000519054 C14orf132Q9NPU4 83 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 RASL12Q9NYN1 266 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 PYCARDQ9ULZ3 195 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 ASB4Q9Y574 426 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 U3KQ87 197 aa0.38□□□□□ -2.35
SKP1-205ENST00000519054 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.37□□□□□ -2.35
SKP1-205ENST00000519054 C20orf202A1L168 122 aa0.37□□□□□ -2.35
SKP1-205ENST00000519054 TAX1BP3O14907 124 aa0.37□□□□□ -2.35
SKP1-205ENST00000519054 TIMM17BO60830 172 aa0.37□□□□□ -2.35
SKP1-205ENST00000519054 DHFRP00374 187 aa0.37□□□□□ -2.35
SKP1-205ENST00000519054 KDELR1P24390 212 aa0.37□□□□□ -2.35
SKP1-205ENST00000519054 EIF5AP63241 154 aaKnown RBP0.37□□□□□ -2.35
SKP1-205ENST00000519054 SARNPP82979 210 aaKnown RBP0.37□□□□□ -2.35
SKP1-205ENST00000519054 KRR1Q13601 381 aaKnown RBP0.37□□□□□ -2.35
SKP1-205ENST00000519054 MPV17LQ2QL34 196 aa0.37□□□□□ -2.35
SKP1-205ENST00000519054 AKIRIN2Q53H80 203 aa0.37□□□□□ -2.35
SKP1-205ENST00000519054 NCBP2-AS2Q69YL0 99 aa0.37□□□□□ -2.35
SKP1-205ENST00000519054 TEX47Q8TBZ9 253 aa0.37□□□□□ -2.35
SKP1-205ENST00000519054 LEAP2Q969E1 77 aa0.37□□□□□ -2.35
SKP1-205ENST00000519054 BTF3L4Q96K17 158 aa0.37□□□□□ -2.35
SKP1-205ENST00000519054 C9orf16Q9BUW7 83 aa0.37□□□□□ -2.35
SKP1-205ENST00000519054 TTTY10Q9BZA0 68 aa0.37□□□□□ -2.35
SKP1-205ENST00000519054 ARMC1Q9NVT9 282 aa0.37□□□□□ -2.35
SKP1-205ENST00000519054 NUBP2Q9Y5Y2 271 aa0.37□□□□□ -2.35
SKP1-205ENST00000519054 LOC107986453A0A1B0GWG9 222 aa0.36□□□□□ -2.35
SKP1-205ENST00000519054 TRBV6-4A0A1B0GX49 114 aa0.36□□□□□ -2.35
SKP1-205ENST00000519054 C9orf92A6NGG3 77 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms