RNA–Protein interactions for RNA: ENST00000518794.6

ARFGAP1-209, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 1 (best)

Gene ARFGAP1, Length 2,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-209ENST00000518794 PROK1P58294 105 aa13.38□□□□□ -0.27
ARFGAP1-209ENST00000518794 ZNF876PQ49A33 203 aa13.38□□□□□ -0.27
ARFGAP1-209ENST00000518794 ABCA12Q86UK0 2595 aa13.37□□□□□ -0.27
ARFGAP1-209ENST00000518794 LRRK2Q5S007 2527 aa13.37□□□□□ -0.27
ARFGAP1-209ENST00000518794 CSDC2Q9Y534 153 aaKnown RBP13.37□□□□□ -0.27
ARFGAP1-209ENST00000518794 IGHV1OR15-1A0A075B7D0 117 aa13.36□□□□□ -0.27
ARFGAP1-209ENST00000518794 SNRPD3P62318 126 aaKnown RBP13.36□□□□□ -0.27
ARFGAP1-209ENST00000518794 TIMM17AQ99595 171 aa13.36□□□□□ -0.27
ARFGAP1-209ENST00000518794 Q9UF83 564 aa13.36□□□□□ -0.27
ARFGAP1-209ENST00000518794 TEX49A0A1B0GTD5 131 aa13.36□□□□□ -0.27
ARFGAP1-209ENST00000518794 RBMY1A1P0DJD3 496 aaKnown RBP13.36□□□□□ -0.27
ARFGAP1-209ENST00000518794 RBMY1CP0DJD4 496 aa13.36□□□□□ -0.27
ARFGAP1-209ENST00000518794 RBMY1FQ15415 496 aaKnown RBP13.36□□□□□ -0.27
ARFGAP1-209ENST00000518794 RNASE13Q5GAN3 156 aaKnown RBP13.36□□□□□ -0.27
ARFGAP1-209ENST00000518794 TMEM141Q96I45 108 aa13.36□□□□□ -0.27
ARFGAP1-209ENST00000518794 AMELXQ99217 191 aa13.36□□□□□ -0.27
ARFGAP1-209ENST00000518794 LINC01587Q99440 93 aa13.36□□□□□ -0.27
ARFGAP1-209ENST00000518794 PTPN13Q12923 2485 aa13.36□□□□□ -0.27
ARFGAP1-209ENST00000518794 KNCNA6PVL3 124 aa13.35□□□□□ -0.27
ARFGAP1-209ENST00000518794 B4DSR2 109 aa13.35□□□□□ -0.27
ARFGAP1-209ENST00000518794 J3QQQ9 107 aa13.35□□□□□ -0.27
ARFGAP1-209ENST00000518794 K7EQG2 157 aa13.35□□□□□ -0.27
ARFGAP1-209ENST00000518794 DEFB136Q30KP8 78 aa13.35□□□□□ -0.27
ARFGAP1-209ENST00000518794 CEMP1Q6PRD7 247 aaPredicted RBP13.35□□□□□ -0.27
ARFGAP1-209ENST00000518794 C10orf126Q8N4M7 172 aa13.35□□□□□ -0.27
ARFGAP1-209ENST00000518794 TRAV8-4A0A0B4J246 113 aa13.35□□□□□ -0.27
ARFGAP1-209ENST00000518794 ADARB2-AS1A8MUL3 147 aa13.35□□□□□ -0.27
ARFGAP1-209ENST00000518794 IGHV3-30P01768 117 aa13.35□□□□□ -0.27
ARFGAP1-209ENST00000518794 IGHV3-30-5P0DP03 117 aa13.35□□□□□ -0.27
ARFGAP1-209ENST00000518794 NOTCH3Q9UM47 2321 aa13.35□□□□□ -0.27
ARFGAP1-209ENST00000518794 H7C2G1 150 aa13.34□□□□□ -0.27
ARFGAP1-209ENST00000518794 C18orf65Q6ZTR6 163 aa13.34□□□□□ -0.27
ARFGAP1-209ENST00000518794 A0A0J9YXV3 536 aa13.34□□□□□ -0.27
ARFGAP1-209ENST00000518794 TEX15Q9BXT5 2789 aa13.34□□□□□ -0.27
ARFGAP1-209ENST00000518794 LOC107984640A0A0U1RRK4 108 aa13.33□□□□□ -0.27
ARFGAP1-209ENST00000518794 LINC00694P0DN24 101 aa13.33□□□□□ -0.27
ARFGAP1-209ENST00000518794 LGALS3P17931 250 aaKnown RBP13.33□□□□□ -0.27
ARFGAP1-209ENST00000518794 TMEM126AQ9H061 195 aa13.33□□□□□ -0.28
ARFGAP1-209ENST00000518794 TRBV6-5A0A0K0K1A5 114 aa13.33□□□□□ -0.28
ARFGAP1-209ENST00000518794 PAPPA-AS1Q5QFB9 102 aa13.33□□□□□ -0.28
ARFGAP1-209ENST00000518794 SLC25A29Q8N8R3 303 aa13.33□□□□□ -0.28
ARFGAP1-209ENST00000518794 DUX3Q96PT4 197 aa13.33□□□□□ -0.28
ARFGAP1-209ENST00000518794 TRAV2A0A0B4J234 112 aa13.32□□□□□ -0.28
ARFGAP1-209ENST00000518794 EIF4EBP3O60516 100 aaPredicted RBP13.32□□□□□ -0.28
ARFGAP1-209ENST00000518794 HOXD3P31249 432 aaPredicted RBP13.32□□□□□ -0.28
ARFGAP1-209ENST00000518794 PRO1854Q9UHT4 67 aa13.32□□□□□ -0.28
ARFGAP1-209ENST00000518794 NACAE9PAV3 2078 aa13.31□□□□□ -0.28
ARFGAP1-209ENST00000518794 ELANEP08246 267 aa13.3□□□□□ -0.28
ARFGAP1-209ENST00000518794 C5orf47Q569G3 176 aa13.3□□□□□ -0.28
ARFGAP1-209ENST00000518794 C20orf203Q8NBC4 194 aa13.3□□□□□ -0.28
ARFGAP1-209ENST00000518794 SPANXA1Q9NS26 97 aa13.3□□□□□ -0.28
ARFGAP1-209ENST00000518794 ZNF22P17026 224 aaPredicted RBP13.3□□□□□ -0.28
ARFGAP1-209ENST00000518794 BEX4Q9NWD9 120 aaPredicted RBP13.3□□□□□ -0.28
ARFGAP1-209ENST00000518794 SLURP1P55000 103 aa13.29□□□□□ -0.28
ARFGAP1-209ENST00000518794 SONP18583 2426 aaKnown RBP13.29□□□□□ -0.28
ARFGAP1-209ENST00000518794 SETD2Q9BYW2 2564 aaPredicted RBP13.29□□□□□ -0.28
ARFGAP1-209ENST00000518794 IGLV4-3A0A075B6K6 122 aa13.29□□□□□ -0.28
ARFGAP1-209ENST00000518794 TMEM223A0PJW6 202 aa13.29□□□□□ -0.28
ARFGAP1-209ENST00000518794 NSUN5P1Q3KNT7 163 aa13.29□□□□□ -0.28
ARFGAP1-209ENST00000518794 EPG5Q9HCE0 2579 aa13.28□□□□□ -0.28
ARFGAP1-209ENST00000518794 I3L3M4 83 aa13.28□□□□□ -0.28
ARFGAP1-209ENST00000518794 WNK1Q9H4A3 2382 aa13.28□□□□□ -0.28
ARFGAP1-209ENST00000518794 DEFB131AP59861 70 aa13.27□□□□□ -0.28
ARFGAP1-209ENST00000518794 NAV2Q8IVL1 2488 aa13.27□□□□□ -0.28
ARFGAP1-209ENST00000518794 ZNF462Q96JM2 2506 aa13.27□□□□□ -0.28
ARFGAP1-209ENST00000518794 ZNF469Q96JG9 3925 aaPredicted RBP13.27□□□□□ -0.28
ARFGAP1-209ENST00000518794 CHD6Q8TD26 2715 aa13.27□□□□□ -0.28
ARFGAP1-209ENST00000518794 TRAV8-3A0A0A6YYJ7 113 aa13.27□□□□□ -0.29
ARFGAP1-209ENST00000518794 A8MZ25 164 aa13.27□□□□□ -0.29
ARFGAP1-209ENST00000518794 Q6ZSN1 163 aa13.27□□□□□ -0.29
ARFGAP1-209ENST00000518794 MRPL23Q16540 153 aaKnown RBP13.26□□□□□ -0.29
ARFGAP1-209ENST00000518794 MUSTN1Q8IVN3 82 aa13.26□□□□□ -0.29
ARFGAP1-209ENST00000518794 AKAP9Q99996 3911 aa13.26□□□□□ -0.29
ARFGAP1-209ENST00000518794 C2CD3Q4AC94 2353 aa13.26□□□□□ -0.29
ARFGAP1-209ENST00000518794 RHOHQ15669 191 aa13.26□□□□□ -0.29
ARFGAP1-209ENST00000518794 DNAJC30Q96LL9 226 aa13.26□□□□□ -0.29
ARFGAP1-209ENST00000518794 NF1P21359 2839 aa13.26□□□□□ -0.29
ARFGAP1-209ENST00000518794 FAM104AQ969W3 186 aa13.26□□□□□ -0.29
ARFGAP1-209ENST00000518794 NIPBLQ6KC79 2804 aaeCLIP13.26□□□□□ -0.294e-6■■□□□ 13.9
ARFGAP1-209ENST00000518794 RBMY1BA6NDE4 496 aaKnown RBP13.25□□□□□ -0.29
ARFGAP1-209ENST00000518794 RBMY1EA6NEQ0 496 aaKnown RBP13.25□□□□□ -0.29
ARFGAP1-209ENST00000518794 LEPROTO15243 131 aa13.25□□□□□ -0.29
ARFGAP1-209ENST00000518794 RBMY1DP0C7P1 496 aaKnown RBP13.25□□□□□ -0.29
ARFGAP1-209ENST00000518794 CD28P10747 220 aa13.25□□□□□ -0.29
ARFGAP1-209ENST00000518794 LINC01620Q4KN68 170 aa13.25□□□□□ -0.29
ARFGAP1-209ENST00000518794 IGHV3-38A0A0C4DH36 116 aa13.24□□□□□ -0.29
ARFGAP1-209ENST00000518794 IGHV3-33P01772 117 aa13.24□□□□□ -0.29
ARFGAP1-209ENST00000518794 NPC2P61916 151 aa13.24□□□□□ -0.29
ARFGAP1-209ENST00000518794 LINC01356Q8N9X3 169 aa13.24□□□□□ -0.29
ARFGAP1-209ENST00000518794 PRRC2AP48634 2157 aaKnown RBP13.23□□□□□ -0.29
ARFGAP1-209ENST00000518794 H3BMM0 161 aa13.23□□□□□ -0.29
ARFGAP1-209ENST00000518794 UBE2WQ96B02 151 aa13.23□□□□□ -0.29
ARFGAP1-209ENST00000518794 ZNF702PQ9H963 129 aa13.23□□□□□ -0.29
ARFGAP1-209ENST00000518794 SMIM9A6NGZ8 99 aa13.23□□□□□ -0.29
ARFGAP1-209ENST00000518794 KLK5Q9Y337 293 aaPredicted RBP13.23□□□□□ -0.29
ARFGAP1-209ENST00000518794 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.22□□□□□ -0.29
ARFGAP1-209ENST00000518794 IGKV2-29A2NJV5 120 aaPredicted RBP13.22□□□□□ -0.29
ARFGAP1-209ENST00000518794 RPL13AP40429 203 aaKnown RBP13.22□□□□□ -0.29
ARFGAP1-209ENST00000518794 TRGV11A0A075B6L2 103 aa13.22□□□□□ -0.29
ARFGAP1-209ENST00000518794 IGHV3-30-3P0DP02 117 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms