RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 CSMD3Q7Z407 3707 aa3.98□□□□□ -1.77
SCARNA6.1-201ENST00000516989 TRBV7-3A0A075B6L6 115 aa3.98□□□□□ -1.77
SCARNA6.1-201ENST00000516989 IGHV3-38A0A0C4DH36 116 aa3.98□□□□□ -1.77
SCARNA6.1-201ENST00000516989 TRBV10-1A0A0K0K1A3 114 aa3.98□□□□□ -1.77
SCARNA6.1-201ENST00000516989 C7orf77A4D0Y5 90 aa3.98□□□□□ -1.77
SCARNA6.1-201ENST00000516989 M0QY20 66 aa3.98□□□□□ -1.77
SCARNA6.1-201ENST00000516989 APOC3P02656 99 aa3.98□□□□□ -1.77
SCARNA6.1-201ENST00000516989 RPL24P83731 157 aaKnown RBP3.98□□□□□ -1.77
SCARNA6.1-201ENST00000516989 NDUFA5Q16718 116 aa3.98□□□□□ -1.77
SCARNA6.1-201ENST00000516989 OR10J3Q5JRS4 329 aa3.98□□□□□ -1.77
SCARNA6.1-201ENST00000516989 C10orf91Q5T1B1 145 aa3.98□□□□□ -1.77
SCARNA6.1-201ENST00000516989 MRPL54Q6P161 138 aaKnown RBP3.98□□□□□ -1.77
SCARNA6.1-201ENST00000516989 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.98□□□□□ -1.77
SCARNA6.1-201ENST00000516989 GTSF1LQ9H1H1 148 aa3.98□□□□□ -1.77
SCARNA6.1-201ENST00000516989 RPS10P5Q9NQ39 176 aa3.98□□□□□ -1.77
SCARNA6.1-201ENST00000516989 TRAV8-6A0A0B4J262 113 aa3.97□□□□□ -1.77
SCARNA6.1-201ENST00000516989 TRAV26-2A0A0B4J265 109 aa3.97□□□□□ -1.77
SCARNA6.1-201ENST00000516989 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
SCARNA6.1-201ENST00000516989 SIVA1O15304 175 aa3.97□□□□□ -1.77
SCARNA6.1-201ENST00000516989 S100A8P05109 93 aa3.97□□□□□ -1.77
SCARNA6.1-201ENST00000516989 RAB4AP20338 218 aa3.97□□□□□ -1.77
SCARNA6.1-201ENST00000516989 UBE2D3P61077 147 aa3.97□□□□□ -1.77
SCARNA6.1-201ENST00000516989 UBE2D2P62837 147 aa3.97□□□□□ -1.77
SCARNA6.1-201ENST00000516989 KCNIP4Q6PIL6 250 aa3.97□□□□□ -1.77
SCARNA6.1-201ENST00000516989 RASL11AQ6T310 242 aa3.97□□□□□ -1.77
SCARNA6.1-201ENST00000516989 AMN1Q8IY45 258 aa3.97□□□□□ -1.77
SCARNA6.1-201ENST00000516989 GATD1Q8NB37 220 aa3.97□□□□□ -1.77
SCARNA6.1-201ENST00000516989 DNAJC30Q96LL9 226 aa3.97□□□□□ -1.77
SCARNA6.1-201ENST00000516989 TMEM191AQ9H0A3 160 aa3.97□□□□□ -1.77
SCARNA6.1-201ENST00000516989 NIT2Q9NQR4 276 aa3.97□□□□□ -1.77
SCARNA6.1-201ENST00000516989 CARHSP1Q9Y2V2 147 aaKnown RBP3.97□□□□□ -1.77
SCARNA6.1-201ENST00000516989 MRPS16Q9Y3D3 137 aaKnown RBP3.97□□□□□ -1.77
SCARNA6.1-201ENST00000516989 A0A1B0GW15 77 aa3.96□□□□□ -1.78
SCARNA6.1-201ENST00000516989 TMEM262E9PQX1 116 aa3.96□□□□□ -1.78
SCARNA6.1-201ENST00000516989 SNAPINO95295 136 aa3.96□□□□□ -1.78
SCARNA6.1-201ENST00000516989 S100PP25815 95 aa3.96□□□□□ -1.78
SCARNA6.1-201ENST00000516989 HBBP68871 147 aa3.96□□□□□ -1.78
SCARNA6.1-201ENST00000516989 RHEBQ15382 184 aa3.96□□□□□ -1.78
SCARNA6.1-201ENST00000516989 LELP1Q5T871 98 aa3.96□□□□□ -1.78
SCARNA6.1-201ENST00000516989 DAZ4Q86SG3 579 aaKnown RBP3.96□□□□□ -1.78
SCARNA6.1-201ENST00000516989 SVBPQ8N300 66 aa3.96□□□□□ -1.78
SCARNA6.1-201ENST00000516989 DEFB104AQ8WTQ1 72 aa3.96□□□□□ -1.78
SCARNA6.1-201ENST00000516989 RPL39LQ96EH5 51 aaKnown RBP3.96□□□□□ -1.78
SCARNA6.1-201ENST00000516989 RNF185Q96GF1 192 aa3.96□□□□□ -1.78
SCARNA6.1-201ENST00000516989 BTF3L4Q96K17 158 aa3.96□□□□□ -1.78
SCARNA6.1-201ENST00000516989 IMMP2LQ96T52 175 aa3.96□□□□□ -1.78
SCARNA6.1-201ENST00000516989 UPK3BQ9BT76 320 aa3.96□□□□□ -1.78
SCARNA6.1-201ENST00000516989 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
SCARNA6.1-201ENST00000516989 DAZ3Q9NR90 486 aaKnown RBP3.96□□□□□ -1.78
SCARNA6.1-201ENST00000516989 URGCP-MRPS24S4R325 110 aa3.96□□□□□ -1.78
SCARNA6.1-201ENST00000516989 DYNC2H1Q8NCM8 4307 aaKnown RBP3.96□□□□□ -1.78
SCARNA6.1-201ENST00000516989 HERC2O95714 4834 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 TRAV9-2A0A087WT02 112 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 A0A087WWC5 75 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 NBDYA0A0U1RRE5 68 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 A0A1B0GXF2 115 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 SMKR1H3BMG3 65 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 GAS8-AS1O95177 125 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 NCR2O95944 276 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 IGHV3-30P01768 117 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 IGHV3-33P01772 117 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 LINC00694P0DN24 101 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 IGHV3-30-3P0DP02 117 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 IGHV3-30-5P0DP03 117 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 CKS2P33552 79 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 MRPL51Q4U2R6 128 aaKnown RBP3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 FAM104BQ5XKR9 115 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 ATP5L2Q7Z4Y8 100 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 WFDC10BQ8IUB3 73 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 MAPKAPK5-AS1Q8N8E1 139 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 FRZBQ92765 325 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 MRAP2Q96G30 205 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 ST20Q9HBF5 79 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 TMEM242Q9NWH2 141 aa3.95□□□□□ -1.78
SCARNA6.1-201ENST00000516989 PPP1R17O96001 155 aa3.94□□□□□ -1.78
SCARNA6.1-201ENST00000516989 PMCHP20382 165 aa3.94□□□□□ -1.78
SCARNA6.1-201ENST00000516989 RPS10P46783 165 aaKnown RBP3.94□□□□□ -1.78
SCARNA6.1-201ENST00000516989 TMEM97Q5BJF2 176 aa3.94□□□□□ -1.78
SCARNA6.1-201ENST00000516989 TMEM136Q6ZRR5 245 aa3.94□□□□□ -1.78
SCARNA6.1-201ENST00000516989 CHCHD5Q9BSY4 110 aa3.94□□□□□ -1.78
SCARNA6.1-201ENST00000516989 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
SCARNA6.1-201ENST00000516989 TRBV25-1A0A075B6N4 114 aa3.93□□□□□ -1.78
SCARNA6.1-201ENST00000516989 TRAV9-1A0A075B6T8 112 aa3.93□□□□□ -1.78
SCARNA6.1-201ENST00000516989 IGLV5-45A0A087WSX0 123 aa3.93□□□□□ -1.78
SCARNA6.1-201ENST00000516989 A0A087WX48 190 aa3.93□□□□□ -1.78
SCARNA6.1-201ENST00000516989 TRBV6-8A0A0A6YYG3 113 aa3.93□□□□□ -1.78
SCARNA6.1-201ENST00000516989 SDHAF1A6NFY7 115 aa3.93□□□□□ -1.78
SCARNA6.1-201ENST00000516989 D6R8Y8 96 aa3.93□□□□□ -1.78
SCARNA6.1-201ENST00000516989 I3L3M4 83 aa3.93□□□□□ -1.78
SCARNA6.1-201ENST00000516989 DNAH10OSP0CZ25 163 aa3.93□□□□□ -1.78
SCARNA6.1-201ENST00000516989 GAGE6Q13070 117 aa3.93□□□□□ -1.78
SCARNA6.1-201ENST00000516989 COTL1Q14019 142 aa3.93□□□□□ -1.78
SCARNA6.1-201ENST00000516989 ATRAIDQ6UW56 229 aa3.93□□□□□ -1.78
SCARNA6.1-201ENST00000516989 Q6ZR54 194 aa3.93□□□□□ -1.78
SCARNA6.1-201ENST00000516989 NTM-AS1Q6ZSK4 140 aa3.93□□□□□ -1.78
SCARNA6.1-201ENST00000516989 ORMDL3Q8N138 153 aa3.93□□□□□ -1.78
SCARNA6.1-201ENST00000516989 TGIF2-C20orf24A0A0A6YYL0 155 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 IGHV1-24A0A0C4DH33 117 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 TRBV6-5A0A0K0K1A5 114 aa3.92□□□□□ -1.78
SCARNA6.1-201ENST00000516989 LOC389332A0A1B0GUA5 103 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms