RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 Q6AWC8 147 aa-4.9□□□□□ -3.19
RNU6-539P-201ENST00000516665 C10orf82Q8WW14 230 aa-4.9□□□□□ -3.19
RNU6-539P-201ENST00000516665 BORCS7Q96B45 105 aa-4.9□□□□□ -3.19
RNU6-539P-201ENST00000516665 OR2J1Q9GZK6 312 aa-4.9□□□□□ -3.19
RNU6-539P-201ENST00000516665 HIGD1BQ9P298 99 aa-4.9□□□□□ -3.19
RNU6-539P-201ENST00000516665 R4GMQ9 66 aa-4.9□□□□□ -3.19
RNU6-539P-201ENST00000516665 KIF21AQ7Z4S6 1674 aa-4.9□□□□□ -3.19
RNU6-539P-201ENST00000516665 OCM2P0CE71 109 aa-4.91□□□□□ -3.2
RNU6-539P-201ENST00000516665 BTG2P78543 158 aa-4.91□□□□□ -3.2
RNU6-539P-201ENST00000516665 DYNLRB2Q8TF09 96 aa-4.91□□□□□ -3.2
RNU6-539P-201ENST00000516665 CAMSAP2Q08AD1 1489 aa-4.92□□□□□ -3.2
RNU6-539P-201ENST00000516665 PDE6DO43924 150 aa-4.92□□□□□ -3.2
RNU6-539P-201ENST00000516665 MRPS15P82914 257 aaKnown RBP-4.92□□□□□ -3.2
RNU6-539P-201ENST00000516665 ATP11AUNQ6ZP68 121 aa-4.92□□□□□ -3.2
RNU6-539P-201ENST00000516665 NEK7Q8TDX7 302 aa-4.92□□□□□ -3.2
RNU6-539P-201ENST00000516665 STOML2Q9UJZ1 356 aa-4.92□□□□□ -3.2
RNU6-539P-201ENST00000516665 DISP2A7MBM2 1401 aa-4.92□□□□□ -3.2
RNU6-539P-201ENST00000516665 PIK3C2GO75747 1445 aa-4.92□□□□□ -3.2
RNU6-539P-201ENST00000516665 CRYBG3Q68DQ2 2970 aa-4.92□□□□□ -3.2
RNU6-539P-201ENST00000516665 PPP1R17O96001 155 aa-4.93□□□□□ -3.2
RNU6-539P-201ENST00000516665 PRLHP81277 87 aa-4.93□□□□□ -3.2
RNU6-539P-201ENST00000516665 UFC1Q9Y3C8 167 aa-4.93□□□□□ -3.2
RNU6-539P-201ENST00000516665 NCOA3Q9Y6Q9 1424 aa-4.94□□□□□ -3.2
RNU6-539P-201ENST00000516665 DEFB4AO15263 64 aa-4.94□□□□□ -3.2
RNU6-539P-201ENST00000516665 TNNC2P02585 160 aa-4.94□□□□□ -3.2
RNU6-539P-201ENST00000516665 MT1FP04733 61 aa-4.94□□□□□ -3.2
RNU6-539P-201ENST00000516665 RPL19P84098 196 aaKnown RBP-4.94□□□□□ -3.2
RNU6-539P-201ENST00000516665 OTORQ9NRC9 128 aa-4.94□□□□□ -3.2
RNU6-539P-201ENST00000516665 PLEKHJ1Q9NW61 149 aa-4.94□□□□□ -3.2
RNU6-539P-201ENST00000516665 PYCARDQ9ULZ3 195 aa-4.94□□□□□ -3.2
RNU6-539P-201ENST00000516665 MED23Q9ULK4 1368 aa-4.94□□□□□ -3.2
RNU6-539P-201ENST00000516665 SHANK2Q9UPX8 1470 aa-4.94□□□□□ -3.2
RNU6-539P-201ENST00000516665 TMEM213A2RRL7 107 aa-4.95□□□□□ -3.2
RNU6-539P-201ENST00000516665 APOA1P02647 267 aa-4.95□□□□□ -3.2
RNU6-539P-201ENST00000516665 MRPL40Q9NQ50 206 aaKnown RBP-4.95□□□□□ -3.2
RNU6-539P-201ENST00000516665 MYH2Q9UKX2 1941 aa-4.95□□□□□ -3.2
RNU6-539P-201ENST00000516665 CCDC179H3BU77 68 aa-4.96□□□□□ -3.2
RNU6-539P-201ENST00000516665 AIPO00170 330 aa-4.96□□□□□ -3.2
RNU6-539P-201ENST00000516665 CCL22O00626 93 aa-4.96□□□□□ -3.2
RNU6-539P-201ENST00000516665 OGNP20774 298 aaKnown RBP-4.96□□□□□ -3.2
RNU6-539P-201ENST00000516665 ASIPP42127 132 aa-4.96□□□□□ -3.2
RNU6-539P-201ENST00000516665 C10orf113Q5VZT2 155 aa-4.96□□□□□ -3.2
RNU6-539P-201ENST00000516665 STX12Q86Y82 276 aa-4.96□□□□□ -3.2
RNU6-539P-201ENST00000516665 FAM9BQ8IZU0 186 aa-4.96□□□□□ -3.2
RNU6-539P-201ENST00000516665 PGRMC1O00264 195 aaKnown RBP-4.97□□□□□ -3.21
RNU6-539P-201ENST00000516665 CSTAP01040 98 aa-4.97□□□□□ -3.21
RNU6-539P-201ENST00000516665 COX5BP10606 129 aa-4.97□□□□□ -3.21
RNU6-539P-201ENST00000516665 FABP2P12104 132 aa-4.97□□□□□ -3.21
RNU6-539P-201ENST00000516665 PLGLB1Q02325 96 aa-4.97□□□□□ -3.21
RNU6-539P-201ENST00000516665 DCUN1D5Q9BTE7 237 aa-4.97□□□□□ -3.21
RNU6-539P-201ENST00000516665 RAD50Q92878 1312 aa-4.97□□□□□ -3.21
RNU6-539P-201ENST00000516665 TRBV27A0A0K0K1C4 114 aa-4.98□□□□□ -3.21
RNU6-539P-201ENST00000516665 PPP5D1E7EU14 171 aa-4.98□□□□□ -3.21
RNU6-539P-201ENST00000516665 M0QZ92 97 aa-4.98□□□□□ -3.21
RNU6-539P-201ENST00000516665 CRYBA4P53673 196 aa-4.98□□□□□ -3.21
RNU6-539P-201ENST00000516665 METTL1Q9UBP6 276 aaKnown RBP-4.98□□□□□ -3.21
RNU6-539P-201ENST00000516665 LINC00312Q9Y6C7 94 aa-4.98□□□□□ -3.21
RNU6-539P-201ENST00000516665 TECPR2O15040 1411 aa-4.98□□□□□ -3.21
RNU6-539P-201ENST00000516665 TRBV7-3A0A075B6L6 115 aa-4.99□□□□□ -3.21
RNU6-539P-201ENST00000516665 DCTN3O75935 186 aa-4.99□□□□□ -3.21
RNU6-539P-201ENST00000516665 PCBD1P61457 104 aa-4.99□□□□□ -3.21
RNU6-539P-201ENST00000516665 HBDP02042 147 aa-5□□□□□ -3.21
RNU6-539P-201ENST00000516665 TMED2Q15363 201 aa-5□□□□□ -3.21
RNU6-539P-201ENST00000516665 RTL8BQ17RB0 113 aa-5□□□□□ -3.21
RNU6-539P-201ENST00000516665 BAGE2Q86Y30 109 aa-5□□□□□ -3.21
RNU6-539P-201ENST00000516665 RTL8AQ9BWD3 113 aa-5□□□□□ -3.21
RNU6-539P-201ENST00000516665 BTAF1O14981 1849 aa-5□□□□□ -3.21
RNU6-539P-201ENST00000516665 CCDC141Q6ZP82 1450 aa-5□□□□□ -3.21
RNU6-539P-201ENST00000516665 RAPGEF6Q8TEU7 1601 aa-5.01□□□□□ -3.21
RNU6-539P-201ENST00000516665 MYH6P13533 1939 aa-5.01□□□□□ -3.21
RNU6-539P-201ENST00000516665 PNMA8CA0A1B0GUJ8 204 aa-5.01□□□□□ -3.21
RNU6-539P-201ENST00000516665 CLDN24A6NM45 220 aa-5.01□□□□□ -3.21
RNU6-539P-201ENST00000516665 UQCR11O14957 56 aa-5.01□□□□□ -3.21
RNU6-539P-201ENST00000516665 APOEP02649 317 aa-5.01□□□□□ -3.21
RNU6-539P-201ENST00000516665 HIST1H1EP10412 219 aaKnown RBP-5.01□□□□□ -3.21
RNU6-539P-201ENST00000516665 HSD17B12Q53GQ0 312 aa-5.01□□□□□ -3.21
RNU6-539P-201ENST00000516665 TMEM263Q8WUH6 116 aaKnown RBP-5.01□□□□□ -3.21
RNU6-539P-201ENST00000516665 BORCS8Q96FH0 119 aa-5.01□□□□□ -3.21
RNU6-539P-201ENST00000516665 LINC01600Q96MT4 127 aa-5.01□□□□□ -3.21
RNU6-539P-201ENST00000516665 PPIP5K1Q6PFW1 1433 aa-5.01□□□□□ -3.21
RNU6-539P-201ENST00000516665 PXDNQ92626 1479 aa-5.01□□□□□ -3.21
RNU6-539P-201ENST00000516665 UHRF1BP1Q6BDS2 1440 aa-5.02□□□□□ -3.21
RNU6-539P-201ENST00000516665 HMGB3O15347 200 aaKnown RBP-5.02□□□□□ -3.21
RNU6-539P-201ENST00000516665 IFNA16P05015 189 aa-5.02□□□□□ -3.21
RNU6-539P-201ENST00000516665 PMS2P3Q13401 168 aa-5.02□□□□□ -3.21
RNU6-539P-201ENST00000516665 FGFR1OP2Q9NVK5 253 aa-5.02□□□□□ -3.21
RNU6-539P-201ENST00000516665 PRELID3BQ9Y3B1 194 aa-5.02□□□□□ -3.21
RNU6-539P-201ENST00000516665 V9GYH0 126 aa-5.02□□□□□ -3.21
RNU6-539P-201ENST00000516665 MAGI2Q86UL8 1455 aa-5.02□□□□□ -3.21
RNU6-539P-201ENST00000516665 CFAP54Q96N23 3096 aa-5.03□□□□□ -3.21
RNU6-539P-201ENST00000516665 FABP12A6NFH5 140 aa-5.03□□□□□ -3.21
RNU6-539P-201ENST00000516665 HCG22E2RYF7 251 aa-5.03□□□□□ -3.21
RNU6-539P-201ENST00000516665 H3BQV1 296 aa-5.03□□□□□ -3.21
RNU6-539P-201ENST00000516665 CST2P09228 141 aa-5.03□□□□□ -3.21
RNU6-539P-201ENST00000516665 CRYGSP22914 178 aa-5.03□□□□□ -3.21
RNU6-539P-201ENST00000516665 SCIMPQ6UWF3 145 aa-5.03□□□□□ -3.21
RNU6-539P-201ENST00000516665 CNPY4Q8N129 248 aa-5.03□□□□□ -3.21
RNU6-539P-201ENST00000516665 FYCO1Q9BQS8 1478 aa-5.03□□□□□ -3.21
RNU6-539P-201ENST00000516665 ADGBQ8N7X0 1667 aa-5.03□□□□□ -3.21
RNU6-539P-201ENST00000516665 MBD5Q9P267 1494 aa-5.04□□□□□ -3.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms