RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 H3BRM9 83 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 PDCD5O14737 125 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 BCAS2O75934 225 aaPredicted RBP-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 C8GP07360 202 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 TM4SF1P30408 202 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 TNNT3P45378 269 aaPredicted RBP-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 PSMB3P49720 205 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 GPX6P59796 221 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 CKS1BP61024 79 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 FXYD3Q14802 87 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 ORMDL2Q53FV1 153 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 CLVS2Q5SYC1 327 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 C10orf128Q5T292 105 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 SLC48A1Q6P1K1 146 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 ARL9Q6T311 187 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 RASSF6Q6ZTQ3 369 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 AHSA2Q719I0 299 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 DPPA2Q7Z7J5 298 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 BAGE3Q86Y29 109 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 CCDC83Q8IWF9 413 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 ZNF738Q8NE65 137 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 BPIFCQ8NFQ6 507 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 MITD1Q8WV92 249 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 RIT1Q92963 219 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 LTV1Q96GA3 475 aaPredicted RBP-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 SNF8Q96H20 258 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 BPIFA3Q9BQP9 254 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 TMEM43Q9BTV4 400 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 THTPAQ9BU02 230 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 C20orf27Q9GZN8 174 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 WDR61Q9GZS3 305 aaKnown RBP-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 VCX2Q9H322 139 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 RHOJQ9H4E5 214 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 RPRMQ9NS64 109 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 FAM49BQ9NUQ9 324 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 HAUS2Q9NVX0 235 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 ARGLU1Q9NWB6 273 aaPredicted RBP-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 SDHAF2Q9NX18 166 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 DEC1Q9P2X7 70 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 EXTL2Q9UBQ6 330 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 ORC6Q9Y5N6 252 aa-1.38□□□□□ -2.63
SCARNA21.1-201ENST00000515996 TRBC2A0A5B9 178 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 C7orf71A4D174 169 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 OOEPA6NGQ2 149 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 CCDC69A6NI79 296 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 LSM1O15116 133 aaKnown RBP-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 LEPROTL1O95214 131 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 TMEM50AO95807 157 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 CSTBP04080 98 aaKnown RBP-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 GYPCP04921 128 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 SLC25A5P05141 298 aaKnown RBP-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 IVLP07476 585 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 ANXA4P09525 319 aaPredicted RBP-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 TSPAN19P0C672 248 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 ARMS2P0C7Q2 107 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 SMIM6P0DI80 62 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 CXCL3P19876 107 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 HSD11B1P28845 292 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 SFNP31947 248 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 SNCAP37840 140 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 TNNT2P45379 298 aaPredicted RBP-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 SRP9P49458 86 aaKnown RBP-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 CASP4P49662 377 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 PSMB2P49721 201 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 CRIP1P50238 77 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 PSME3P61289 254 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 RPL31P62899 125 aaKnown RBP-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 PUDPQ08623 228 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 COX17Q14061 63 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 EXOC3L4Q17RC7 722 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 CNPY1Q3B7I2 92 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 BOLA3Q53S33 107 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 CFAP58Q5T655 872 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 RWDD4Q6NW29 188 aaKnown RBP-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 TTC23LQ6PF05 361 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 SFTA2Q6UW10 78 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 PRUNE1Q86TP1 453 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 CTAGE3PQ8IX95 158 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 SLC35F2Q8IXU6 374 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 CMTM8Q8IZV2 173 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 ACBD7Q8N6N7 88 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 TMCO5AQ8N6Q1 288 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 OR9Q1Q8NGQ5 310 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 LRRC29Q8WV35 223 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 UCMAQ8WVF2 138 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 DYDC1Q8WWB3 177 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 C1orf54Q8WWF1 131 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 TCEAL4Q96EI5 215 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 TRNT1Q96Q11 434 aaKnown RBP-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 TMEM243Q9BU79 118 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 ATG5Q9H1Y0 275 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 TMEM133Q9H2Q1 129 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 ARMC1Q9NVT9 282 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 COMMD3Q9UBI1 195 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 NAT8Q9UHE5 227 aa-1.39□□□□□ -2.63
SCARNA21.1-201ENST00000515996 TMEM218A2RU14 115 aa-1.4□□□□□ -2.63
SCARNA21.1-201ENST00000515996 HMSDA8MTL9 139 aa-1.4□□□□□ -2.63
SCARNA21.1-201ENST00000515996 HIGD1CA8MV81 97 aa-1.4□□□□□ -2.63
SCARNA21.1-201ENST00000515996 G3V2T6 193 aa-1.4□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms