RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 DAND5Q8N907 189 aa8.57□□□□□ -1.04
TCOF1-211ENST00000513346 ORMDL1Q9P0S3 153 aa8.57□□□□□ -1.04
TCOF1-211ENST00000513346 MRPS12O15235 138 aaKnown RBP8.57□□□□□ -1.04
TCOF1-211ENST00000513346 TMEM258P61165 79 aa8.57□□□□□ -1.04
TCOF1-211ENST00000513346 DEFB136Q30KP8 78 aa8.57□□□□□ -1.04
TCOF1-211ENST00000513346 ZFP36P26651 326 aaKnown RBP8.56□□□□□ -1.04
TCOF1-211ENST00000513346 C20orf203Q8NBC4 194 aa8.56□□□□□ -1.04
TCOF1-211ENST00000513346 CCL24O00175 119 aa8.56□□□□□ -1.04
TCOF1-211ENST00000513346 IGHV3-30P01768 117 aa8.56□□□□□ -1.04
TCOF1-211ENST00000513346 IGHV3-30-5P0DP03 117 aa8.56□□□□□ -1.04
TCOF1-211ENST00000513346 MIAQ16674 131 aa8.56□□□□□ -1.04
TCOF1-211ENST00000513346 IMUPQ9GZP8 106 aa8.56□□□□□ -1.04
TCOF1-211ENST00000513346 TRIAP1O43715 76 aa8.55□□□□□ -1.04
TCOF1-211ENST00000513346 APOC4P55056 127 aa8.55□□□□□ -1.04
TCOF1-211ENST00000513346 OPRPNQ99935 248 aaPredicted RBP8.55□□□□□ -1.04
TCOF1-211ENST00000513346 CRLF1O75462 422 aa8.55□□□□□ -1.04
TCOF1-211ENST00000513346 NDUFA7O95182 113 aa8.55□□□□□ -1.04
TCOF1-211ENST00000513346 SS18Q15532 418 aa8.55□□□□□ -1.04
TCOF1-211ENST00000513346 Q8N9W7 124 aa8.55□□□□□ -1.04
TCOF1-211ENST00000513346 MRAPQ8TCY5 172 aa8.55□□□□□ -1.04
TCOF1-211ENST00000513346 BPTFQ12830 3046 aa8.55□□□□□ -1.04
TCOF1-211ENST00000513346 A0A096LNJ9 63 aa8.55□□□□□ -1.04
TCOF1-211ENST00000513346 PSCAO43653 123 aa8.54□□□□□ -1.04
TCOF1-211ENST00000513346 ZMAT4Q9H898 229 aa8.54□□□□□ -1.04
TCOF1-211ENST00000513346 LRP4O75096 1905 aa8.54□□□□□ -1.04
TCOF1-211ENST00000513346 NRACQ8N912 160 aa8.54□□□□□ -1.04
TCOF1-211ENST00000513346 AJUBAQ96IF1 538 aa8.53□□□□□ -1.04
TCOF1-211ENST00000513346 MDFICQ9P1T7 246 aa8.53□□□□□ -1.04
TCOF1-211ENST00000513346 NFE4Q86UQ8 179 aa8.53□□□□□ -1.04
TCOF1-211ENST00000513346 SND1-IT1Q9HBX3 110 aa8.53□□□□□ -1.04
TCOF1-211ENST00000513346 TNRC6BQ9UPQ9 1833 aaKnown RBP8.53□□□□□ -1.04
TCOF1-211ENST00000513346 GAS8-AS1O95177 125 aa8.53□□□□□ -1.04
TCOF1-211ENST00000513346 DSCR8Q96T75 97 aa8.53□□□□□ -1.04
TCOF1-211ENST00000513346 hADV29S1A0JD25 119 aa8.52□□□□□ -1.04
TCOF1-211ENST00000513346 COX7A2LO14548 114 aa8.52□□□□□ -1.04
TCOF1-211ENST00000513346 PLA2G2AP14555 144 aa8.52□□□□□ -1.04
TCOF1-211ENST00000513346 FAM110AQ9BQ89 295 aa8.52□□□□□ -1.04
TCOF1-211ENST00000513346 TANC2Q9HCD6 1990 aa8.52□□□□□ -1.05
TCOF1-211ENST00000513346 WDFY4Q6ZS81 3184 aa8.52□□□□□ -1.05
TCOF1-211ENST00000513346 C5orf56Q8N8D9 126 aa8.52□□□□□ -1.05
TCOF1-211ENST00000513346 UBE2D1P51668 147 aa8.52□□□□□ -1.05
TCOF1-211ENST00000513346 SLURP1P55000 103 aa8.52□□□□□ -1.05
TCOF1-211ENST00000513346 TMEM223A0PJW6 202 aa8.52□□□□□ -1.05
TCOF1-211ENST00000513346 C19orf84I3L1E1 186 aa8.52□□□□□ -1.05
TCOF1-211ENST00000513346 NXPH4O95158 308 aa8.52□□□□□ -1.05
TCOF1-211ENST00000513346 NACAE9PAV3 2078 aa8.52□□□□□ -1.05
TCOF1-211ENST00000513346 DSCAMO60469 2012 aa8.51□□□□□ -1.05
TCOF1-211ENST00000513346 PSMB8P28062 276 aa8.51□□□□□ -1.05
TCOF1-211ENST00000513346 CPAMD8Q8IZJ3 1885 aa8.51□□□□□ -1.05
TCOF1-211ENST00000513346 ZNF22P17026 224 aaPredicted RBP8.51□□□□□ -1.05
TCOF1-211ENST00000513346 DAZ2Q13117 558 aaKnown RBP8.51□□□□□ -1.05
TCOF1-211ENST00000513346 DAZ4Q86SG3 579 aaKnown RBP8.51□□□□□ -1.05
TCOF1-211ENST00000513346 VSIG2Q96IQ7 327 aa8.51□□□□□ -1.05
TCOF1-211ENST00000513346 CNFNQ9BYD5 112 aa8.51□□□□□ -1.05
TCOF1-211ENST00000513346 DAZ3Q9NR90 486 aaKnown RBP8.51□□□□□ -1.05
TCOF1-211ENST00000513346 IGHG2P01859 326 aa8.51□□□□□ -1.05
TCOF1-211ENST00000513346 UBE2D3P61077 147 aa8.5□□□□□ -1.05
TCOF1-211ENST00000513346 UBE2D2P62837 147 aa8.5□□□□□ -1.05
TCOF1-211ENST00000513346 SIRPDQ9H106 197 aa8.5□□□□□ -1.05
TCOF1-211ENST00000513346 CDIP1Q9H305 208 aa8.5□□□□□ -1.05
TCOF1-211ENST00000513346 VCANP13611 3396 aa8.5□□□□□ -1.05
TCOF1-211ENST00000513346 F8P00451 2351 aa8.5□□□□□ -1.05
TCOF1-211ENST00000513346 DEFB1P60022 68 aa8.5□□□□□ -1.05
TCOF1-211ENST00000513346 M0QXV9 152 aa8.49□□□□□ -1.05
TCOF1-211ENST00000513346 NDUFC2O95298 119 aa8.49□□□□□ -1.05
TCOF1-211ENST00000513346 Q6ZS46 218 aa8.49□□□□□ -1.05
TCOF1-211ENST00000513346 JMJD7-PLA2G4BH0Y9G9 81 aa8.49□□□□□ -1.05
TCOF1-211ENST00000513346 LECT2O14960 151 aa8.49□□□□□ -1.05
TCOF1-211ENST00000513346 CITED2Q99967 270 aaPredicted RBP8.49□□□□□ -1.05
TCOF1-211ENST00000513346 Q9HAA7 133 aa8.49□□□□□ -1.05
TCOF1-211ENST00000513346 ARHGAP32A7KAX9 2087 aa8.48□□□□□ -1.05
TCOF1-211ENST00000513346 TMEM61Q8N0U2 210 aa8.48□□□□□ -1.05
TCOF1-211ENST00000513346 SMAD5-AS1Q9Y6J3 95 aa8.48□□□□□ -1.05
TCOF1-211ENST00000513346 LMO4P61968 165 aa8.48□□□□□ -1.05
TCOF1-211ENST00000513346 SDIM1Q6ZPB5 146 aa8.48□□□□□ -1.05
TCOF1-211ENST00000513346 COX7CP15954 63 aa8.48□□□□□ -1.05
TCOF1-211ENST00000513346 APRG1Q8IVJ8 170 aa8.48□□□□□ -1.05
TCOF1-211ENST00000513346 TMEM263Q8WUH6 116 aaKnown RBP8.48□□□□□ -1.05
TCOF1-211ENST00000513346 C14orf132Q9NPU4 83 aa8.48□□□□□ -1.05
TCOF1-211ENST00000513346 LST1O00453 97 aa8.47□□□□□ -1.05
TCOF1-211ENST00000513346 LINC00694P0DN24 101 aa8.47□□□□□ -1.05
TCOF1-211ENST00000513346 FAM240AA0A1B0GVK7 77 aa8.47□□□□□ -1.05
TCOF1-211ENST00000513346 C9orf66Q5T8R8 295 aa8.46□□□□□ -1.05
TCOF1-211ENST00000513346 HIST2H2BDQ6DRA6 164 aa8.46□□□□□ -1.05
TCOF1-211ENST00000513346 NOP10Q9NPE3 64 aaKnown RBP8.46□□□□□ -1.05
TCOF1-211ENST00000513346 U3KQE9 123 aa8.46□□□□□ -1.05
TCOF1-211ENST00000513346 IGHV4-4A0A075B6R2 117 aa8.46□□□□□ -1.06
TCOF1-211ENST00000513346 IGHV4OR15-8A0A075B7B6 117 aa8.46□□□□□ -1.06
TCOF1-211ENST00000513346 A0A087WW49 117 aa8.46□□□□□ -1.06
TCOF1-211ENST00000513346 Q6ZQT7 251 aa8.46□□□□□ -1.06
TCOF1-211ENST00000513346 A0A096LPF7 62 aa8.46□□□□□ -1.06
TCOF1-211ENST00000513346 H7C423 109 aa8.46□□□□□ -1.06
TCOF1-211ENST00000513346 C11orf21Q9P2W6 132 aa8.46□□□□□ -1.06
TCOF1-211ENST00000513346 IGLV4-3A0A075B6K6 122 aa8.45□□□□□ -1.06
TCOF1-211ENST00000513346 ZNF561-AS1K7EIQ3 104 aa8.45□□□□□ -1.06
TCOF1-211ENST00000513346 CEMP1Q6PRD7 247 aaPredicted RBP8.45□□□□□ -1.06
TCOF1-211ENST00000513346 BBC3Q96PG8 261 aaPredicted RBP8.45□□□□□ -1.06
TCOF1-211ENST00000513346 IGF1P05019 195 aa8.45□□□□□ -1.06
TCOF1-211ENST00000513346 SERP2Q8N6R1 65 aa8.45□□□□□ -1.06
TCOF1-211ENST00000513346 COX7B2Q8TF08 81 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 586 ms