RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 FANCD2Q9BXW9 1451 aa3.57□□□□□ -1.84
CHD1-208ENST00000512392 HMGN4O00479 90 aa3.57□□□□□ -1.84
CHD1-208ENST00000512392 SPINT3P49223 89 aa3.57□□□□□ -1.84
CHD1-208ENST00000512392 NDUFA11Q86Y39 141 aa3.57□□□□□ -1.84
CHD1-208ENST00000512392 PLXNC1O60486 1568 aa3.57□□□□□ -1.84
CHD1-208ENST00000512392 SLIT2O94813 1529 aa3.57□□□□□ -1.84
CHD1-208ENST00000512392 LRRC9Q6ZRR7 1453 aa3.57□□□□□ -1.84
CHD1-208ENST00000512392 TIAM1Q13009 1591 aa3.56□□□□□ -1.84
CHD1-208ENST00000512392 A0A0G2JQZ4 141 aa3.56□□□□□ -1.84
CHD1-208ENST00000512392 TMEM14DPA8MWL7 114 aa3.56□□□□□ -1.84
CHD1-208ENST00000512392 HMGN2P05204 90 aaKnown RBP3.56□□□□□ -1.84
CHD1-208ENST00000512392 SMIM11AP58511 58 aa3.56□□□□□ -1.84
CHD1-208ENST00000512392 TMEM14BQ9NUH8 114 aa3.56□□□□□ -1.84
CHD1-208ENST00000512392 COL4A5P29400 1685 aa3.56□□□□□ -1.84
CHD1-208ENST00000512392 C1orf167Q5SNV9 1468 aa3.56□□□□□ -1.84
CHD1-208ENST00000512392 TPRXLQ17RH7 258 aa3.56□□□□□ -1.84
CHD1-208ENST00000512392 PATE1Q8WXA2 126 aa3.56□□□□□ -1.84
CHD1-208ENST00000512392 DMAC1Q96GE9 116 aa3.56□□□□□ -1.84
CHD1-208ENST00000512392 HILPDAQ9Y5L2 63 aa3.56□□□□□ -1.84
CHD1-208ENST00000512392 MED12LQ86YW9 2145 aa3.55□□□□□ -1.84
CHD1-208ENST00000512392 COX6CP09669 75 aa3.55□□□□□ -1.84
CHD1-208ENST00000512392 SPACA4Q8TDM5 124 aa3.55□□□□□ -1.84
CHD1-208ENST00000512392 DLG5Q8TDM6 1919 aa3.55□□□□□ -1.84
CHD1-208ENST00000512392 URB2Q14146 1524 aaKnown RBP3.55□□□□□ -1.84
CHD1-208ENST00000512392 RP1P56715 2156 aa3.55□□□□□ -1.84
CHD1-208ENST00000512392 TRBV6-7A0A0A0MS04 114 aa3.54□□□□□ -1.84
CHD1-208ENST00000512392 TRBV6-8A0A0A6YYG3 113 aa3.54□□□□□ -1.84
CHD1-208ENST00000512392 RGPD1P0DJD0 1748 aa3.54□□□□□ -1.84
CHD1-208ENST00000512392 MYOFQ9NZM1 2061 aa3.54□□□□□ -1.84
CHD1-208ENST00000512392 DSCR10P59022 87 aa3.54□□□□□ -1.84
CHD1-208ENST00000512392 DYNLRB1Q9NP97 96 aa3.54□□□□□ -1.84
CHD1-208ENST00000512392 KIAA0100Q14667 2235 aaKnown RBP3.54□□□□□ -1.84
CHD1-208ENST00000512392 NINQ8N4C6 2090 aa3.53□□□□□ -1.84
CHD1-208ENST00000512392 ARHGEF5Q12774 1597 aa3.53□□□□□ -1.84
CHD1-208ENST00000512392 ZNF815PA8K554 130 aa3.53□□□□□ -1.84
CHD1-208ENST00000512392 ORMDL1Q9P0S3 153 aa3.53□□□□□ -1.84
CHD1-208ENST00000512392 KIF21BO75037 1637 aa3.53□□□□□ -1.84
CHD1-208ENST00000512392 RGPD8O14715 1765 aaPredicted RBP3.53□□□□□ -1.84
CHD1-208ENST00000512392 RGPD5Q99666 1765 aa3.53□□□□□ -1.84
CHD1-208ENST00000512392 ITSN2Q9NZM3 1697 aa3.53□□□□□ -1.84
CHD1-208ENST00000512392 KDM6BO15054 1643 aa3.53□□□□□ -1.85
CHD1-208ENST00000512392 BIVM-ERCC5R4GMW8 1640 aa3.53□□□□□ -1.85
CHD1-208ENST00000512392 GAS8-AS1O95177 125 aa3.52□□□□□ -1.85
CHD1-208ENST00000512392 LY6EQ16553 131 aa3.52□□□□□ -1.85
CHD1-208ENST00000512392 DEFB134Q4QY38 66 aa3.52□□□□□ -1.85
CHD1-208ENST00000512392 PSMG4Q5JS54 123 aa3.52□□□□□ -1.85
CHD1-208ENST00000512392 LAMB2P55268 1798 aa3.52□□□□□ -1.85
CHD1-208ENST00000512392 BTAF1O14981 1849 aa3.52□□□□□ -1.85
CHD1-208ENST00000512392 HEATR1Q9H583 2144 aaKnown RBP3.52□□□□□ -1.85
CHD1-208ENST00000512392 MYMXA0A1B0GTQ4 84 aa3.52□□□□□ -1.85
CHD1-208ENST00000512392 DEFB121Q5J5C9 76 aa3.52□□□□□ -1.85
CHD1-208ENST00000512392 A0A0J9YY99 117 aa3.51□□□□□ -1.85
CHD1-208ENST00000512392 LOC101927531A0A1B0GV80 90 aa3.51□□□□□ -1.85
CHD1-208ENST00000512392 IGKV1-17P01599 117 aa3.51□□□□□ -1.85
CHD1-208ENST00000512392 COX8AP10176 69 aa3.51□□□□□ -1.85
CHD1-208ENST00000512392 XAF1Q6GPH4 301 aa3.51□□□□□ -1.85
CHD1-208ENST00000512392 IGKV3-15P01624 115 aa3.51□□□□□ -1.85
CHD1-208ENST00000512392 IGLV3-1P01715 115 aa3.51□□□□□ -1.85
CHD1-208ENST00000512392 C6orf201Q7Z4U5 140 aa3.51□□□□□ -1.85
CHD1-208ENST00000512392 ARL2-SNX15V9GYD0 113 aa3.51□□□□□ -1.85
CHD1-208ENST00000512392 ABCA6Q8N139 1617 aa3.51□□□□□ -1.85
CHD1-208ENST00000512392 GLI2P10070 1586 aa3.5□□□□□ -1.85
CHD1-208ENST00000512392 IGLV3-32A0A0A0MS00 114 aa3.5□□□□□ -1.85
CHD1-208ENST00000512392 TRAV40A0A0B4J280 105 aa3.5□□□□□ -1.85
CHD1-208ENST00000512392 PPYP01298 95 aa3.5□□□□□ -1.85
CHD1-208ENST00000512392 EHBP1L1Q8N3D4 1523 aa3.5□□□□□ -1.85
CHD1-208ENST00000512392 CR1P17927 2039 aa3.5□□□□□ -1.85
CHD1-208ENST00000512392 CTTNBP2Q8WZ74 1663 aa3.49□□□□□ -1.85
CHD1-208ENST00000512392 FXYD1O00168 92 aa3.49□□□□□ -1.85
CHD1-208ENST00000512392 PPP1R17O96001 155 aa3.49□□□□□ -1.85
CHD1-208ENST00000512392 C3orf79P0CE67 100 aa3.49□□□□□ -1.85
CHD1-208ENST00000512392 GCHFRP30047 84 aa3.49□□□□□ -1.85
CHD1-208ENST00000512392 KRTAP10-6P60371 365 aaPredicted RBP3.49□□□□□ -1.85
CHD1-208ENST00000512392 ESPL1Q14674 2120 aa3.48□□□□□ -1.85
CHD1-208ENST00000512392 ZGRF1Q86YA3 2104 aa3.48□□□□□ -1.85
CHD1-208ENST00000512392 ELOF1P60002 83 aaKnown RBP3.48□□□□□ -1.85
CHD1-208ENST00000512392 PLGLAQ15195 96 aa3.48□□□□□ -1.85
CHD1-208ENST00000512392 FDCSPQ8NFU4 85 aa3.48□□□□□ -1.85
CHD1-208ENST00000512392 LENEPQ9Y5L5 61 aa3.48□□□□□ -1.85
CHD1-208ENST00000512392 UNC13CQ8NB66 2214 aa3.48□□□□□ -1.85
CHD1-208ENST00000512392 MRC1P22897 1456 aa3.48□□□□□ -1.85
CHD1-208ENST00000512392 SCN7AQ01118 1682 aa3.47□□□□□ -1.85
CHD1-208ENST00000512392 XRN1Q8IZH2 1706 aaKnown RBP3.47□□□□□ -1.85
CHD1-208ENST00000512392 IGKV3D-7A0A0C4DH55 119 aa3.47□□□□□ -1.85
CHD1-208ENST00000512392 IGKV3OR2-268A0A0C4DH90 116 aa3.47□□□□□ -1.85
CHD1-208ENST00000512392 CEBPZOSA8MTT3 80 aa3.47□□□□□ -1.85
CHD1-208ENST00000512392 TVP23CQ96ET8 276 aa3.47□□□□□ -1.85
CHD1-208ENST00000512392 AFDNP55196 1824 aaKnown RBP3.47□□□□□ -1.85
CHD1-208ENST00000512392 A0A1B0GWA3 101 aa3.47□□□□□ -1.85
CHD1-208ENST00000512392 HIGD1CA8MV81 97 aa3.47□□□□□ -1.85
CHD1-208ENST00000512392 KRTAP11-1Q8IUC1 163 aa3.47□□□□□ -1.85
CHD1-208ENST00000512392 CYYR1Q96J86 154 aa3.47□□□□□ -1.85
CHD1-208ENST00000512392 RNF17Q9BXT8 1623 aaKnown RBP3.46□□□□□ -1.85
CHD1-208ENST00000512392 IGHV3-30P01768 117 aa3.46□□□□□ -1.86
CHD1-208ENST00000512392 IGHV3-30-5P0DP03 117 aa3.46□□□□□ -1.86
CHD1-208ENST00000512392 SSBP1Q04837 148 aaKnown RBP3.46□□□□□ -1.86
CHD1-208ENST00000512392 PRR15LQ9BU68 103 aa3.46□□□□□ -1.86
CHD1-208ENST00000512392 CLASP1Q7Z460 1538 aa3.46□□□□□ -1.86
CHD1-208ENST00000512392 MYOM1P52179 1685 aa3.46□□□□□ -1.86
CHD1-208ENST00000512392 ZNF142P52746 1687 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms