RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 IGHV1-45A0A0A0MS14 117 aa3.57□□□□□ -1.84
NUP54-210ENST00000510884 TEX49A0A1B0GTD5 131 aa3.57□□□□□ -1.84
NUP54-210ENST00000510884 A6NN06 94 aa3.57□□□□□ -1.84
NUP54-210ENST00000510884 NUP98P52948 1817 aa3.57□□□□□ -1.84
NUP54-210ENST00000510884 FGF12P61328 243 aa3.57□□□□□ -1.84
NUP54-210ENST00000510884 EIF4EBP1Q13541 118 aaPredicted RBP3.57□□□□□ -1.84
NUP54-210ENST00000510884 ZNF491Q8N8L2 437 aa3.57□□□□□ -1.84
NUP54-210ENST00000510884 CCL4L1Q8NHW4 92 aa3.57□□□□□ -1.84
NUP54-210ENST00000510884 ITLN1Q8WWA0 313 aa3.57□□□□□ -1.84
NUP54-210ENST00000510884 DOCK4Q8N1I0 1966 aa3.56□□□□□ -1.84
NUP54-210ENST00000510884 ANKRD36A6QL64 1941 aa3.56□□□□□ -1.84
NUP54-210ENST00000510884 PTPRDP23468 1912 aa3.56□□□□□ -1.84
NUP54-210ENST00000510884 TRBV30A0A0K0K1B3 111 aa3.56□□□□□ -1.84
NUP54-210ENST00000510884 IL9P15248 144 aa3.56□□□□□ -1.84
NUP54-210ENST00000510884 KISS1Q15726 138 aa3.56□□□□□ -1.84
NUP54-210ENST00000510884 C20orf197Q8N268 126 aa3.56□□□□□ -1.84
NUP54-210ENST00000510884 LINC00269Q8N2A0 174 aa3.56□□□□□ -1.84
NUP54-210ENST00000510884 UBALD1Q8TB05 177 aa3.56□□□□□ -1.84
NUP54-210ENST00000510884 ITLN2Q8WWU7 325 aaPredicted RBP3.56□□□□□ -1.84
NUP54-210ENST00000510884 TMEM141Q96I45 108 aa3.56□□□□□ -1.84
NUP54-210ENST00000510884 SCGB3A1Q96QR1 104 aa3.56□□□□□ -1.84
NUP54-210ENST00000510884 PLA2G12AQ9BZM1 189 aa3.56□□□□□ -1.84
NUP54-210ENST00000510884 PHLDA3Q9Y5J5 127 aa3.56□□□□□ -1.84
NUP54-210ENST00000510884 IGF2RP11717 2491 aa3.56□□□□□ -1.84
NUP54-210ENST00000510884 DOCK8Q8NF50 2099 aa3.56□□□□□ -1.84
NUP54-210ENST00000510884 COL12A1Q99715 3063 aa3.56□□□□□ -1.84
NUP54-210ENST00000510884 DMXL2Q8TDJ6 3036 aa3.56□□□□□ -1.84
NUP54-210ENST00000510884 OBSL1O75147 1896 aa3.56□□□□□ -1.84
NUP54-210ENST00000510884 ZFHX3Q15911 3703 aa3.55□□□□□ -1.84
NUP54-210ENST00000510884 IGKV1D-17A0A075B6S4 117 aa3.55□□□□□ -1.84
NUP54-210ENST00000510884 IGKV1-27A0A075B6S5 117 aa3.55□□□□□ -1.84
NUP54-210ENST00000510884 IGLV3-32A0A0A0MS00 114 aa3.55□□□□□ -1.84
NUP54-210ENST00000510884 IGKV1-8A0A0C4DH67 115 aa3.55□□□□□ -1.84
NUP54-210ENST00000510884 C3orf84H3BNL1 204 aa3.55□□□□□ -1.84
NUP54-210ENST00000510884 PIN1P1O15428 100 aa3.55□□□□□ -1.84
NUP54-210ENST00000510884 FCER1GP30273 86 aa3.55□□□□□ -1.84
NUP54-210ENST00000510884 RPL27AP46776 148 aaKnown RBP3.55□□□□□ -1.84
NUP54-210ENST00000510884 ZNF138P52744 262 aa3.55□□□□□ -1.84
NUP54-210ENST00000510884 LYPD5Q6UWN5 251 aa3.55□□□□□ -1.84
NUP54-210ENST00000510884 PATE2Q6UY27 113 aa3.55□□□□□ -1.84
NUP54-210ENST00000510884 SOSTDC1Q6X4U4 206 aa3.55□□□□□ -1.84
NUP54-210ENST00000510884 ZNF818PQ6ZRF7 136 aa3.55□□□□□ -1.84
NUP54-210ENST00000510884 FAM223AQ8IWN6 122 aa3.55□□□□□ -1.84
NUP54-210ENST00000510884 FAM167A-AS1Q96KT0 104 aa3.55□□□□□ -1.84
NUP54-210ENST00000510884 LINC00467Q9BRT7 94 aa3.55□□□□□ -1.84
NUP54-210ENST00000510884 LINC00474Q9P2X8 69 aa3.55□□□□□ -1.84
NUP54-210ENST00000510884 KIAA1671Q9BY89 1806 aa3.55□□□□□ -1.84
NUP54-210ENST00000510884 BAZ2BQ9UIF8 2168 aaKnown RBP3.55□□□□□ -1.84
NUP54-210ENST00000510884 POLQO75417 2590 aa3.54□□□□□ -1.84
NUP54-210ENST00000510884 SETD2Q9BYW2 2564 aaPredicted RBP3.54□□□□□ -1.84
NUP54-210ENST00000510884 IGHV1OR15-9A0A0B4J2B8 117 aa3.54□□□□□ -1.84
NUP54-210ENST00000510884 TRBV5-4A0A0C4DH59 114 aa3.54□□□□□ -1.84
NUP54-210ENST00000510884 TMEM223A0PJW6 202 aa3.54□□□□□ -1.84
NUP54-210ENST00000510884 TMEM30CPA0ZSE6 113 aa3.54□□□□□ -1.84
NUP54-210ENST00000510884 MIFP14174 115 aa3.54□□□□□ -1.84
NUP54-210ENST00000510884 FXYD7P58549 80 aa3.54□□□□□ -1.84
NUP54-210ENST00000510884 C17orf82Q86X59 251 aaPredicted RBP3.54□□□□□ -1.84
NUP54-210ENST00000510884 ZNRF1Q8ND25 227 aa3.54□□□□□ -1.84
NUP54-210ENST00000510884 UBE2D4Q9Y2X8 147 aa3.54□□□□□ -1.84
NUP54-210ENST00000510884 IGHV3OR16-12A0A075B7B8 117 aa3.53□□□□□ -1.84
NUP54-210ENST00000510884 DNAL4O96015 105 aa3.53□□□□□ -1.84
NUP54-210ENST00000510884 IGHV4-34P06331 123 aa3.53□□□□□ -1.84
NUP54-210ENST00000510884 ZNF32P17041 273 aa3.53□□□□□ -1.84
NUP54-210ENST00000510884 IGLV3-21P80748 117 aaPredicted RBP3.53□□□□□ -1.84
NUP54-210ENST00000510884 LINC00173Q6ZV60 143 aa3.53□□□□□ -1.84
NUP54-210ENST00000510884 DYNAPQ8N1N2 210 aa3.53□□□□□ -1.84
NUP54-210ENST00000510884 ZNF525Q8N782 197 aa3.53□□□□□ -1.84
NUP54-210ENST00000510884 NABP2Q9BQ15 211 aa3.53□□□□□ -1.84
NUP54-210ENST00000510884 LIMD2Q9BT23 127 aa3.53□□□□□ -1.84
NUP54-210ENST00000510884 TMEM167BQ9NRX6 74 aa3.53□□□□□ -1.84
NUP54-210ENST00000510884 TMEM14AQ9Y6G1 99 aa3.53□□□□□ -1.84
NUP54-210ENST00000510884 MGAMO43451 1857 aa3.53□□□□□ -1.84
NUP54-210ENST00000510884 RALGAPA2Q2PPJ7 1873 aa3.53□□□□□ -1.84
NUP54-210ENST00000510884 COL4A1P02462 1669 aa3.52□□□□□ -1.85
NUP54-210ENST00000510884 TECTAO75443 2155 aa3.52□□□□□ -1.85
NUP54-210ENST00000510884 ZNF815PA8K554 130 aa3.52□□□□□ -1.85
NUP54-210ENST00000510884 F8WEM9 126 aa3.52□□□□□ -1.85
NUP54-210ENST00000510884 IGKV1-16P04430 117 aa3.52□□□□□ -1.85
NUP54-210ENST00000510884 GIG44P09565 113 aaPredicted RBP3.52□□□□□ -1.85
NUP54-210ENST00000510884 IGHV3-43DP0DP04 118 aa3.52□□□□□ -1.85
NUP54-210ENST00000510884 NPPCP23582 126 aa3.52□□□□□ -1.85
NUP54-210ENST00000510884 ORMDL3Q8N138 153 aa3.52□□□□□ -1.85
NUP54-210ENST00000510884 Q8N6K4 173 aa3.52□□□□□ -1.85
NUP54-210ENST00000510884 PTPRBP23467 1997 aa3.51□□□□□ -1.85
NUP54-210ENST00000510884 FAM223BA6NKX1 122 aa3.51□□□□□ -1.85
NUP54-210ENST00000510884 LEPROTO15243 131 aa3.51□□□□□ -1.85
NUP54-210ENST00000510884 GNRH2O43555 120 aa3.51□□□□□ -1.85
NUP54-210ENST00000510884 ZNF22P17026 224 aaPredicted RBP3.51□□□□□ -1.85
NUP54-210ENST00000510884 SYCNQ0VAF6 134 aa3.51□□□□□ -1.85
NUP54-210ENST00000510884 NDUFA12Q9UI09 145 aa3.51□□□□□ -1.85
NUP54-210ENST00000510884 DOCK9Q9BZ29 2069 aa3.51□□□□□ -1.85
NUP54-210ENST00000510884 POLEQ07864 2286 aa3.51□□□□□ -1.85
NUP54-210ENST00000510884 ABCA2Q9BZC7 2435 aa3.51□□□□□ -1.85
NUP54-210ENST00000510884 TLN1Q9Y490 2541 aaKnown RBP3.5□□□□□ -1.85
NUP54-210ENST00000510884 J3QKU1 62 aa3.5□□□□□ -1.85
NUP54-210ENST00000510884 PPP1R17O96001 155 aa3.5□□□□□ -1.85
NUP54-210ENST00000510884 EDDM3BP56851 147 aa3.5□□□□□ -1.85
NUP54-210ENST00000510884 BSPH1Q075Z2 132 aa3.5□□□□□ -1.85
NUP54-210ENST00000510884 WFDC6Q9BQY6 131 aa3.5□□□□□ -1.85
NUP54-210ENST00000510884 LINC00597Q9H2U6 94 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms