RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 IFT172Q9UG01 1749 aa0.19□□□□□ -2.38
COL4A3BP-205ENST00000508692 TTC9CQ8N5M4 171 aa0.19□□□□□ -2.38
COL4A3BP-205ENST00000508692 SMIM4Q8WVI0 70 aa0.19□□□□□ -2.38
COL4A3BP-205ENST00000508692 MRC1P22897 1456 aa0.18□□□□□ -2.38
COL4A3BP-205ENST00000508692 MBD5Q9P267 1494 aa0.18□□□□□ -2.38
COL4A3BP-205ENST00000508692 CYP4F30PQ9H0H9 118 aa0.18□□□□□ -2.38
COL4A3BP-205ENST00000508692 DOCK11Q5JSL3 2073 aa0.18□□□□□ -2.38
COL4A3BP-205ENST00000508692 NPVFQ9HCQ7 196 aa0.17□□□□□ -2.38
COL4A3BP-205ENST00000508692 SCN3BQ9NY72 215 aa0.17□□□□□ -2.38
COL4A3BP-205ENST00000508692 U3KQA8 63 aa0.17□□□□□ -2.38
COL4A3BP-205ENST00000508692 SYNE1Q8NF91 8797 aaKnown RBP0.16□□□□□ -2.38
COL4A3BP-205ENST00000508692 CTXND1A0A1B0GTU2 59 aa0.16□□□□□ -2.38
COL4A3BP-205ENST00000508692 EFCAB10A6NFE3 127 aa0.16□□□□□ -2.38
COL4A3BP-205ENST00000508692 MIF4GDA9UHW6 222 aaKnown RBP0.16□□□□□ -2.38
COL4A3BP-205ENST00000508692 M0R135 149 aa0.16□□□□□ -2.38
COL4A3BP-205ENST00000508692 APOC2P02655 101 aa0.16□□□□□ -2.38
COL4A3BP-205ENST00000508692 COX17Q14061 63 aa0.16□□□□□ -2.38
COL4A3BP-205ENST00000508692 C8orf59Q8N0T1 100 aaPredicted RBP0.16□□□□□ -2.38
COL4A3BP-205ENST00000508692 V9GYH0 126 aa0.16□□□□□ -2.38
COL4A3BP-205ENST00000508692 MAST4O15021 2626 aa0.16□□□□□ -2.38
COL4A3BP-205ENST00000508692 PHLPP1O60346 1717 aa0.16□□□□□ -2.38
COL4A3BP-205ENST00000508692 SARNPP82979 210 aaKnown RBP0.15□□□□□ -2.39
COL4A3BP-205ENST00000508692 SPAG11BQ08648 103 aa0.15□□□□□ -2.39
COL4A3BP-205ENST00000508692 SPAG11AQ6PDA7 123 aa0.15□□□□□ -2.39
COL4A3BP-205ENST00000508692 PRO0255Q9UI72 69 aa0.15□□□□□ -2.39
COL4A3BP-205ENST00000508692 F8P00451 2351 aa0.14□□□□□ -2.39
COL4A3BP-205ENST00000508692 CPSF1Q10570 1443 aaKnown RBP0.14□□□□□ -2.39
COL4A3BP-205ENST00000508692 PRDM2Q13029 1718 aa0.14□□□□□ -2.39
COL4A3BP-205ENST00000508692 SSSCA1O60232 199 aa0.14□□□□□ -2.39
COL4A3BP-205ENST00000508692 IFNGP01579 166 aa0.14□□□□□ -2.39
COL4A3BP-205ENST00000508692 AKAIN1P0CW23 69 aa0.14□□□□□ -2.39
COL4A3BP-205ENST00000508692 S100A3P33764 101 aa0.14□□□□□ -2.39
COL4A3BP-205ENST00000508692 CATR1Q13166 79 aa0.14□□□□□ -2.39
COL4A3BP-205ENST00000508692 RPL13AP3Q6NVV1 102 aa0.14□□□□□ -2.39
COL4A3BP-205ENST00000508692 KTN1Q86UP2 1357 aaKnown RBP0.14□□□□□ -2.39
COL4A3BP-205ENST00000508692 FAT4Q6V0I7 4981 aa0.14□□□□□ -2.39
COL4A3BP-205ENST00000508692 FSIP2Q5CZC0 6907 aa0.14□□□□□ -2.39
COL4A3BP-205ENST00000508692 ARAP2Q8WZ64 1704 aa0.13□□□□□ -2.39
COL4A3BP-205ENST00000508692 NCOR2Q9Y618 2525 aa0.13□□□□□ -2.39
COL4A3BP-205ENST00000508692 MGST2Q99735 147 aa0.13□□□□□ -2.39
COL4A3BP-205ENST00000508692 SPANXDQ9BXN6 97 aa0.13□□□□□ -2.39
COL4A3BP-205ENST00000508692 DYNLRB1Q9NP97 96 aa0.13□□□□□ -2.39
COL4A3BP-205ENST00000508692 SPCS1Q9Y6A9 102 aa0.13□□□□□ -2.39
COL4A3BP-205ENST00000508692 A2ML1A8K2U0 1454 aa0.12□□□□□ -2.39
COL4A3BP-205ENST00000508692 ROCK2O75116 1388 aaKnown RBP0.12□□□□□ -2.39
COL4A3BP-205ENST00000508692 ASXL3Q9C0F0 2248 aa0.12□□□□□ -2.39
COL4A3BP-205ENST00000508692 IFITM1P13164 125 aa0.12□□□□□ -2.39
COL4A3BP-205ENST00000508692 C5orf38Q86SI9 138 aa0.12□□□□□ -2.39
COL4A3BP-205ENST00000508692 PP6455Q8WZ26 134 aa0.12□□□□□ -2.39
COL4A3BP-205ENST00000508692 AMELXQ99217 191 aa0.12□□□□□ -2.39
COL4A3BP-205ENST00000508692 NDUFA4L2Q9NRX3 87 aa0.12□□□□□ -2.39
COL4A3BP-205ENST00000508692 IGF2RP11717 2491 aa0.12□□□□□ -2.39
COL4A3BP-205ENST00000508692 LRRC37A2A6NM11 1700 aa0.12□□□□□ -2.39
COL4A3BP-205ENST00000508692 BIVM-ERCC5R4GMW8 1640 aa0.12□□□□□ -2.39
COL4A3BP-205ENST00000508692 TRBV7-3A0A075B6L6 115 aa0.11□□□□□ -2.39
COL4A3BP-205ENST00000508692 TRAV22A0A0B4J277 110 aa0.11□□□□□ -2.39
COL4A3BP-205ENST00000508692 LOC100130705A0A1B0GUX0 176 aa0.11□□□□□ -2.39
COL4A3BP-205ENST00000508692 TPPP2P59282 170 aa0.11□□□□□ -2.39
COL4A3BP-205ENST00000508692 COMMD6Q7Z4G1 85 aa0.11□□□□□ -2.39
COL4A3BP-205ENST00000508692 LOC285095A0A1B0GVY8 99 aa0.1□□□□□ -2.39
COL4A3BP-205ENST00000508692 UQCR11O14957 56 aa0.1□□□□□ -2.39
COL4A3BP-205ENST00000508692 CFDP00746 253 aaPredicted RBP0.1□□□□□ -2.39
COL4A3BP-205ENST00000508692 TNFP01375 233 aa0.1□□□□□ -2.39
COL4A3BP-205ENST00000508692 APOC3P02656 99 aa0.1□□□□□ -2.39
COL4A3BP-205ENST00000508692 TMEM170BQ5T4T1 132 aa0.1□□□□□ -2.39
COL4A3BP-205ENST00000508692 FAM208BQ5VWN6 2430 aa0.1□□□□□ -2.39
COL4A3BP-205ENST00000508692 FOCADQ5VW36 1801 aa0.1□□□□□ -2.39
COL4A3BP-205ENST00000508692 CACNA1CQ13936 2221 aa0.1□□□□□ -2.39
COL4A3BP-205ENST00000508692 PATJQ8NI35 1801 aa0.09□□□□□ -2.39
COL4A3BP-205ENST00000508692 MYH9P35579 1960 aaKnown RBP0.09□□□□□ -2.39
COL4A3BP-205ENST00000508692 M0R3E3 92 aa0.09□□□□□ -2.4
COL4A3BP-205ENST00000508692 HAMPP81172 84 aa0.09□□□□□ -2.4
COL4A3BP-205ENST00000508692 BAGE2Q86Y30 109 aa0.09□□□□□ -2.4
COL4A3BP-205ENST00000508692 MYOZ3Q8TDC0 251 aa0.09□□□□□ -2.4
COL4A3BP-205ENST00000508692 IGSF10Q6WRI0 2623 aa0.08□□□□□ -2.4
COL4A3BP-205ENST00000508692 F8VRH5 84 aa0.08□□□□□ -2.4
COL4A3BP-205ENST00000508692 WFDC2Q14508 124 aa0.08□□□□□ -2.4
COL4A3BP-205ENST00000508692 MRPL54Q6P161 138 aaKnown RBP0.08□□□□□ -2.4
COL4A3BP-205ENST00000508692 HIVEP3Q5T1R4 2406 aa0.08□□□□□ -2.4
COL4A3BP-205ENST00000508692 NHSL1Q5SYE7 1610 aa0.08□□□□□ -2.4
COL4A3BP-205ENST00000508692 CELSR2Q9HCU4 2923 aa0.08□□□□□ -2.4
COL4A3BP-205ENST00000508692 QRICH2Q9H0J4 1663 aa0.08□□□□□ -2.4
COL4A3BP-205ENST00000508692 LRP6O75581 1613 aa0.07□□□□□ -2.4
COL4A3BP-205ENST00000508692 Q8IZM0 81 aa0.07□□□□□ -2.4
COL4A3BP-205ENST00000508692 DMBT1Q9UGM3 2413 aaPredicted RBP0.07□□□□□ -2.4
COL4A3BP-205ENST00000508692 ERCC6L2Q5T890 1561 aa0.06□□□□□ -2.4
COL4A3BP-205ENST00000508692 KDM3BQ7LBC6 1761 aa0.06□□□□□ -2.4
COL4A3BP-205ENST00000508692 RIMS1Q86UR5 1692 aaKnown RBP0.06□□□□□ -2.4
COL4A3BP-205ENST00000508692 UBE2L5PA0A1B0GUS4 154 aa0.06□□□□□ -2.4
COL4A3BP-205ENST00000508692 C10orf142B7Z368 130 aa0.06□□□□□ -2.4
COL4A3BP-205ENST00000508692 DLEU1O43261 78 aa0.06□□□□□ -2.4
COL4A3BP-205ENST00000508692 ATP5EP56381 51 aaPredicted RBP0.06□□□□□ -2.4
COL4A3BP-205ENST00000508692 UBE2L3P68036 154 aaKnown RBP0.06□□□□□ -2.4
COL4A3BP-205ENST00000508692 C9orf153Q5TBE3 101 aa0.06□□□□□ -2.4
COL4A3BP-205ENST00000508692 AHCTF1Q8WYP5 2266 aa0.06□□□□□ -2.4
COL4A3BP-205ENST00000508692 DOCK1Q14185 1865 aa0.05□□□□□ -2.4
COL4A3BP-205ENST00000508692 SMG6Q86US8 1419 aaKnown RBP0.05□□□□□ -2.4
COL4A3BP-205ENST00000508692 MYH7P12883 1935 aa0.05□□□□□ -2.4
COL4A3BP-205ENST00000508692 MYH8P13535 1937 aa0.05□□□□□ -2.4
COL4A3BP-205ENST00000508692 OTOGQ6ZRI0 2925 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms