RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 SMIM12Q96EX1 92 aa7.11□□□□□ -1.27
UBE2D3-219ENST00000505207 PGLYRP4Q96LB8 373 aa7.11□□□□□ -1.27
UBE2D3-219ENST00000505207 NIT2Q9NQR4 276 aa7.11□□□□□ -1.27
UBE2D3-219ENST00000505207 IFNA1P01562 189 aa7.1□□□□□ -1.27
UBE2D3-219ENST00000505207 IGLC6P0CF74 106 aa7.1□□□□□ -1.27
UBE2D3-219ENST00000505207 AMTP48728 403 aa7.1□□□□□ -1.27
UBE2D3-219ENST00000505207 GNG4P50150 75 aa7.1□□□□□ -1.27
UBE2D3-219ENST00000505207 CENPWQ5EE01 88 aa7.1□□□□□ -1.27
UBE2D3-219ENST00000505207 EIF5AL1Q6IS14 154 aaKnown RBP7.1□□□□□ -1.27
UBE2D3-219ENST00000505207 C11orf52Q96A22 123 aa7.1□□□□□ -1.27
UBE2D3-219ENST00000505207 GNG13Q9P2W3 67 aa7.1□□□□□ -1.27
UBE2D3-219ENST00000505207 A0A087WYN8 130 aa7.09□□□□□ -1.27
UBE2D3-219ENST00000505207 PANO1I0J062 215 aa7.09□□□□□ -1.27
UBE2D3-219ENST00000505207 BCL2L11O43521 198 aa7.09□□□□□ -1.27
UBE2D3-219ENST00000505207 RAB5CP51148 216 aa7.09□□□□□ -1.27
UBE2D3-219ENST00000505207 HNRNPA3P51991 378 aaKnown RBP7.09□□□□□ -1.27
UBE2D3-219ENST00000505207 CCL20P78556 96 aa7.09□□□□□ -1.27
UBE2D3-219ENST00000505207 LRP1Q07954 4544 aaKnown RBP7.08□□□□□ -1.28
UBE2D3-219ENST00000505207 IGLV4-60A0A075B6I1 120 aa7.08□□□□□ -1.28
UBE2D3-219ENST00000505207 TRAV1-1A0A0B4J248 108 aa7.08□□□□□ -1.28
UBE2D3-219ENST00000505207 SMLR1H3BR10 107 aa7.08□□□□□ -1.28
UBE2D3-219ENST00000505207 PDE6DO43924 150 aa7.08□□□□□ -1.28
UBE2D3-219ENST00000505207 PKIGQ9Y2B9 76 aa7.08□□□□□ -1.28
UBE2D3-219ENST00000505207 C19orf71A6NCJ1 209 aa7.07□□□□□ -1.28
UBE2D3-219ENST00000505207 NTF3P20783 257 aa7.07□□□□□ -1.28
UBE2D3-219ENST00000505207 RPS10P46783 165 aaKnown RBP7.07□□□□□ -1.28
UBE2D3-219ENST00000505207 AMMECR1LQ6DCA0 310 aa7.07□□□□□ -1.28
UBE2D3-219ENST00000505207 LYZL1Q6UWQ5 148 aa7.07□□□□□ -1.28
UBE2D3-219ENST00000505207 SMIM15Q7Z3B0 74 aa7.07□□□□□ -1.28
UBE2D3-219ENST00000505207 C9orf62Q8N4C0 152 aa7.07□□□□□ -1.28
UBE2D3-219ENST00000505207 SPACA4Q8TDM5 124 aa7.07□□□□□ -1.28
UBE2D3-219ENST00000505207 PLAC8Q9NZF1 115 aa7.07□□□□□ -1.28
UBE2D3-219ENST00000505207 GAGE12HA6NDE8 117 aa7.06□□□□□ -1.28
UBE2D3-219ENST00000505207 TWIST1Q15672 202 aa7.06□□□□□ -1.28
UBE2D3-219ENST00000505207 MED9Q9NWA0 146 aa7.06□□□□□ -1.28
UBE2D3-219ENST00000505207 RAB19A4D1S5 217 aa7.05□□□□□ -1.28
UBE2D3-219ENST00000505207 H7C423 109 aa7.05□□□□□ -1.28
UBE2D3-219ENST00000505207 NDUFS6O75380 124 aaKnown RBP7.05□□□□□ -1.28
UBE2D3-219ENST00000505207 NCR2O95944 276 aa7.05□□□□□ -1.28
UBE2D3-219ENST00000505207 SLPIP03973 132 aa7.05□□□□□ -1.28
UBE2D3-219ENST00000505207 CHTF8P0CG12 524 aa7.05□□□□□ -1.28
UBE2D3-219ENST00000505207 MT1HL1P0DM35 61 aa7.05□□□□□ -1.28
UBE2D3-219ENST00000505207 MEF2BQ02080 365 aaPredicted RBP7.05□□□□□ -1.28
UBE2D3-219ENST00000505207 TEX261Q6UWH6 196 aa7.05□□□□□ -1.28
UBE2D3-219ENST00000505207 GTSF1Q8WW33 167 aa7.05□□□□□ -1.28
UBE2D3-219ENST00000505207 LINC00474Q9P2X8 69 aa7.05□□□□□ -1.28
UBE2D3-219ENST00000505207 HMCN2Q8NDA2 5059 aa7.05□□□□□ -1.28
UBE2D3-219ENST00000505207 IGKV3OR2-268A0A0C4DH90 116 aa7.04□□□□□ -1.28
UBE2D3-219ENST00000505207 PHOX2AO14813 284 aa7.04□□□□□ -1.28
UBE2D3-219ENST00000505207 TAGLN2P37802 199 aaKnown RBP7.04□□□□□ -1.28
UBE2D3-219ENST00000505207 COX6A2Q02221 97 aa7.04□□□□□ -1.28
UBE2D3-219ENST00000505207 MAJINQ3KP22 176 aa7.04□□□□□ -1.28
UBE2D3-219ENST00000505207 RNASEKQ6P5S7 137 aaKnown RBP7.04□□□□□ -1.28
UBE2D3-219ENST00000505207 BTF3L4Q96K17 158 aa7.04□□□□□ -1.28
UBE2D3-219ENST00000505207 GFRA4Q9GZZ7 299 aa7.04□□□□□ -1.28
UBE2D3-219ENST00000505207 APCSP02743 223 aa7.03□□□□□ -1.28
UBE2D3-219ENST00000505207 CTRLP40313 264 aa7.03□□□□□ -1.28
UBE2D3-219ENST00000505207 C15orf56Q8N910 161 aa7.03□□□□□ -1.28
UBE2D3-219ENST00000505207 NUDT10Q8NFP7 164 aa7.03□□□□□ -1.28
UBE2D3-219ENST00000505207 CHCHD10Q8WYQ3 142 aaPredicted RBP7.03□□□□□ -1.28
UBE2D3-219ENST00000505207 NUDT11Q96G61 164 aa7.03□□□□□ -1.28
UBE2D3-219ENST00000505207 TMEM101Q96IK0 257 aa7.03□□□□□ -1.28
UBE2D3-219ENST00000505207 FAM210AQ96ND0 272 aa7.03□□□□□ -1.28
UBE2D3-219ENST00000505207 FAT3Q8TDW7 4589 aa7.02□□□□□ -1.29
UBE2D3-219ENST00000505207 ZNF25P17030 456 aaPredicted RBP7.02□□□□□ -1.29
UBE2D3-219ENST00000505207 HIGD2BQ4VC39 106 aa7.02□□□□□ -1.29
UBE2D3-219ENST00000505207 STPG4Q8N801 248 aa7.02□□□□□ -1.29
UBE2D3-219ENST00000505207 GATD1Q8NB37 220 aa7.02□□□□□ -1.29
UBE2D3-219ENST00000505207 CNFNQ9BYD5 112 aa7.02□□□□□ -1.29
UBE2D3-219ENST00000505207 RPP21Q9H633 154 aaKnown RBP7.02□□□□□ -1.29
UBE2D3-219ENST00000505207 GVQW2A0A096LPI5 108 aaPredicted RBP7.01□□□□□ -1.29
UBE2D3-219ENST00000505207 IGKV2-24A0A0C4DH68 120 aa7.01□□□□□ -1.29
UBE2D3-219ENST00000505207 BCL2P10415 239 aa7.01□□□□□ -1.29
UBE2D3-219ENST00000505207 FGF6P10767 208 aa7.01□□□□□ -1.29
UBE2D3-219ENST00000505207 PMCHP20382 165 aa7.01□□□□□ -1.29
UBE2D3-219ENST00000505207 PRSS3P2Q8NHM4 247 aa7.01□□□□□ -1.29
UBE2D3-219ENST00000505207 REG3GQ6UW15 175 aa7□□□□□ -1.29
UBE2D3-219ENST00000505207 OR5A1Q8NGJ0 315 aa7□□□□□ -1.29
UBE2D3-219ENST00000505207 LINC01600Q96MT4 127 aa7□□□□□ -1.29
UBE2D3-219ENST00000505207 UBR4Q5T4S7 5183 aa7□□□□□ -1.29
UBE2D3-219ENST00000505207 TRBV20OR9-2A0A075B6H5 130 aa6.99□□□□□ -1.29
UBE2D3-219ENST00000505207 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.99□□□□□ -1.29
UBE2D3-219ENST00000505207 TRAV26-2A0A0B4J265 109 aa6.99□□□□□ -1.29
UBE2D3-219ENST00000505207 IGHV1-58A0A0C4DH39 117 aa6.99□□□□□ -1.29
UBE2D3-219ENST00000505207 IGKV2-29A2NJV5 120 aaPredicted RBP6.99□□□□□ -1.29
UBE2D3-219ENST00000505207 SDHAF1A6NFY7 115 aa6.99□□□□□ -1.29
UBE2D3-219ENST00000505207 I3L3M4 83 aa6.99□□□□□ -1.29
UBE2D3-219ENST00000505207 PRR3P79522 188 aaKnown RBP6.99□□□□□ -1.29
UBE2D3-219ENST00000505207 SS18Q15532 418 aa6.99□□□□□ -1.29
UBE2D3-219ENST00000505207 SPINK6Q6UWN8 80 aa6.99□□□□□ -1.29
UBE2D3-219ENST00000505207 LYPD6BQ8NI32 183 aa6.99□□□□□ -1.29
UBE2D3-219ENST00000505207 BORCS7Q96B45 105 aa6.99□□□□□ -1.29
UBE2D3-219ENST00000505207 A8MWL6 223 aa6.98□□□□□ -1.29
UBE2D3-219ENST00000505207 XCL1P47992 114 aa6.98□□□□□ -1.29
UBE2D3-219ENST00000505207 SMAGPQ0VAQ4 97 aa6.98□□□□□ -1.29
UBE2D3-219ENST00000505207 FOXI1Q12951 378 aa6.98□□□□□ -1.29
UBE2D3-219ENST00000505207 Q6ZNX1 250 aa6.98□□□□□ -1.29
UBE2D3-219ENST00000505207 OCC1Q8TAD7 63 aa6.98□□□□□ -1.29
UBE2D3-219ENST00000505207 RPL39LQ96EH5 51 aaKnown RBP6.98□□□□□ -1.29
UBE2D3-219ENST00000505207 RNASE7Q9H1E1 156 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms