RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 I3L3M4 83 aa5.59□□□□□ -1.52
CDC42SE2-208ENST00000505065 SMIM2Q9BVW6 85 aa5.59□□□□□ -1.52
CDC42SE2-208ENST00000505065 IBA57-AS1B1ANH7 110 aa5.58□□□□□ -1.52
CDC42SE2-208ENST00000505065 S100PP25815 95 aa5.58□□□□□ -1.52
CDC42SE2-208ENST00000505065 PKIAP61925 76 aa5.58□□□□□ -1.52
CDC42SE2-208ENST00000505065 Q8N8P6 123 aa5.58□□□□□ -1.52
CDC42SE2-208ENST00000505065 LINC00310P59036 64 aa5.58□□□□□ -1.52
CDC42SE2-208ENST00000505065 SMIM15Q7Z3B0 74 aa5.58□□□□□ -1.52
CDC42SE2-208ENST00000505065 PYGO1Q9Y3Y4 419 aa5.58□□□□□ -1.52
CDC42SE2-208ENST00000505065 A0A1B0GVY2 172 aa5.58□□□□□ -1.52
CDC42SE2-208ENST00000505065 OR10J3Q5JRS4 329 aa5.58□□□□□ -1.52
CDC42SE2-208ENST00000505065 FAM74A4Q5TZK3 123 aa5.58□□□□□ -1.52
CDC42SE2-208ENST00000505065 VPS13BQ7Z7G8 4022 aa5.58□□□□□ -1.52
CDC42SE2-208ENST00000505065 Q0VG73 95 aa5.58□□□□□ -1.52
CDC42SE2-208ENST00000505065 A0A096LNJ9 63 aa5.57□□□□□ -1.52
CDC42SE2-208ENST00000505065 SDHAF1A6NFY7 115 aa5.57□□□□□ -1.52
CDC42SE2-208ENST00000505065 MRPS36P82909 103 aaKnown RBP5.57□□□□□ -1.52
CDC42SE2-208ENST00000505065 TPPP3Q9BW30 176 aa5.57□□□□□ -1.52
CDC42SE2-208ENST00000505065 MRPL18Q9H0U6 180 aaKnown RBP5.57□□□□□ -1.52
CDC42SE2-208ENST00000505065 ST20Q9HBF5 79 aa5.57□□□□□ -1.52
CDC42SE2-208ENST00000505065 NBDYA0A0U1RRE5 68 aa5.57□□□□□ -1.52
CDC42SE2-208ENST00000505065 GAGE12JA6NER3 117 aa5.57□□□□□ -1.52
CDC42SE2-208ENST00000505065 VCYO14598 125 aa5.57□□□□□ -1.52
CDC42SE2-208ENST00000505065 APCSP02743 223 aa5.57□□□□□ -1.52
CDC42SE2-208ENST00000505065 ZNF25P17030 456 aaPredicted RBP5.57□□□□□ -1.52
CDC42SE2-208ENST00000505065 GAGE1Q13065 139 aa5.57□□□□□ -1.52
CDC42SE2-208ENST00000505065 GAGE4Q13068 117 aa5.57□□□□□ -1.52
CDC42SE2-208ENST00000505065 GAGE5Q13069 117 aa5.57□□□□□ -1.52
CDC42SE2-208ENST00000505065 GAGE13Q4V321 117 aa5.57□□□□□ -1.52
CDC42SE2-208ENST00000505065 COA6Q5JTJ3 125 aaKnown RBP5.57□□□□□ -1.52
CDC42SE2-208ENST00000505065 WFDC10BQ8IUB3 73 aa5.57□□□□□ -1.52
CDC42SE2-208ENST00000505065 LOC105371267A0A1B0GV96 52 aa5.56□□□□□ -1.52
CDC42SE2-208ENST00000505065 SMKR1H3BMG3 65 aa5.56□□□□□ -1.52
CDC42SE2-208ENST00000505065 PDZD11Q5EBL8 140 aa5.56□□□□□ -1.52
CDC42SE2-208ENST00000505065 IGHV1-24A0A0C4DH33 117 aa5.56□□□□□ -1.52
CDC42SE2-208ENST00000505065 CCL18P55774 89 aa5.56□□□□□ -1.52
CDC42SE2-208ENST00000505065 UBE2D4Q9Y2X8 147 aa5.56□□□□□ -1.52
CDC42SE2-208ENST00000505065 MGPP08493 103 aa5.56□□□□□ -1.52
CDC42SE2-208ENST00000505065 C18orf32Q8TCD1 76 aa5.56□□□□□ -1.52
CDC42SE2-208ENST00000505065 PRELID3AQ96N28 172 aa5.56□□□□□ -1.52
CDC42SE2-208ENST00000505065 Q9H8V8 135 aa5.56□□□□□ -1.52
CDC42SE2-208ENST00000505065 RAB5AP20339 215 aa5.55□□□□□ -1.52
CDC42SE2-208ENST00000505065 CAMPP49913 170 aa5.55□□□□□ -1.52
CDC42SE2-208ENST00000505065 HTN3P15516 51 aa5.55□□□□□ -1.52
CDC42SE2-208ENST00000505065 C20orf203Q8NBC4 194 aa5.55□□□□□ -1.52
CDC42SE2-208ENST00000505065 TNFRSF18Q9Y5U5 241 aa5.55□□□□□ -1.52
CDC42SE2-208ENST00000505065 APOBP04114 4563 aaKnown RBP5.55□□□□□ -1.52
CDC42SE2-208ENST00000505065 IGIPA6NJ69 53 aa5.55□□□□□ -1.52
CDC42SE2-208ENST00000505065 NXT2Q9NPJ8 142 aaKnown RBP5.55□□□□□ -1.52
CDC42SE2-208ENST00000505065 RTL8CO15255 209 aa5.54□□□□□ -1.52
CDC42SE2-208ENST00000505065 SIVA1O15304 175 aa5.54□□□□□ -1.52
CDC42SE2-208ENST00000505065 NUDT3O95989 172 aa5.54□□□□□ -1.52
CDC42SE2-208ENST00000505065 CKS2P33552 79 aa5.54□□□□□ -1.52
CDC42SE2-208ENST00000505065 ENHOQ6UWT2 76 aa5.54□□□□□ -1.52
CDC42SE2-208ENST00000505065 TOMM6Q96B49 74 aa5.54□□□□□ -1.52
CDC42SE2-208ENST00000505065 AMELXQ99217 191 aa5.54□□□□□ -1.52
CDC42SE2-208ENST00000505065 TTC32Q5I0X7 151 aa5.53□□□□□ -1.52
CDC42SE2-208ENST00000505065 LINC00173Q6ZV60 143 aa5.53□□□□□ -1.52
CDC42SE2-208ENST00000505065 PACRGQ96M98 296 aaPredicted RBP5.53□□□□□ -1.52
CDC42SE2-208ENST00000505065 URGCP-MRPS24S4R325 110 aa5.53□□□□□ -1.52
CDC42SE2-208ENST00000505065 TRBV25-1A0A075B6N4 114 aa5.53□□□□□ -1.52
CDC42SE2-208ENST00000505065 LINC01549A6NIU2 74 aa5.53□□□□□ -1.52
CDC42SE2-208ENST00000505065 LRCOL1A6NCL2 159 aa5.53□□□□□ -1.52
CDC42SE2-208ENST00000505065 EPPK1P58107 5090 aaKnown RBP5.53□□□□□ -1.52
CDC42SE2-208ENST00000505065 CTAG1AP78358 180 aa5.53□□□□□ -1.52
CDC42SE2-208ENST00000505065 CDC42SE2Q9NRR3 84 aa5.53□□□□□ -1.52
CDC42SE2-208ENST00000505065 TRAPPC1Q9Y5R8 145 aa5.53□□□□□ -1.52
CDC42SE2-208ENST00000505065 Q8N3U1 123 aa5.52□□□□□ -1.53
CDC42SE2-208ENST00000505065 C10orf126Q8N4M7 172 aa5.52□□□□□ -1.53
CDC42SE2-208ENST00000505065 CHCHD1Q96BP2 118 aaKnown RBP5.52□□□□□ -1.53
CDC42SE2-208ENST00000505065 TMEM243Q9BU79 118 aa5.52□□□□□ -1.53
CDC42SE2-208ENST00000505065 MAP1LC3AQ9H492 121 aa5.52□□□□□ -1.53
CDC42SE2-208ENST00000505065 TRAV8-6A0A0B4J262 113 aa5.52□□□□□ -1.53
CDC42SE2-208ENST00000505065 IGHV3-38A0A0C4DH36 116 aa5.52□□□□□ -1.53
CDC42SE2-208ENST00000505065 CCL25O15444 150 aa5.52□□□□□ -1.53
CDC42SE2-208ENST00000505065 MPV17L2Q567V2 206 aa5.52□□□□□ -1.53
CDC42SE2-208ENST00000505065 SPANXA1Q9NS26 97 aa5.52□□□□□ -1.53
CDC42SE2-208ENST00000505065 F5H697 171 aa5.52□□□□□ -1.53
CDC42SE2-208ENST00000505065 SCO1O75880 301 aa5.52□□□□□ -1.53
CDC42SE2-208ENST00000505065 COTL1Q14019 142 aa5.52□□□□□ -1.53
CDC42SE2-208ENST00000505065 TIMM17AQ99595 171 aa5.52□□□□□ -1.53
CDC42SE2-208ENST00000505065 FABP9Q0Z7S8 132 aa5.51□□□□□ -1.53
CDC42SE2-208ENST00000505065 IFI27P40305 119 aaPredicted RBP5.51□□□□□ -1.53
CDC42SE2-208ENST00000505065 RBX1P62877 108 aa5.51□□□□□ -1.53
CDC42SE2-208ENST00000505065 LINC01561Q8N1V8 128 aa5.51□□□□□ -1.53
CDC42SE2-208ENST00000505065 LRP1BQ9NZR2 4599 aa5.51□□□□□ -1.53
CDC42SE2-208ENST00000505065 IGLV4-60A0A075B6I1 120 aa5.51□□□□□ -1.53
CDC42SE2-208ENST00000505065 PMCHP20382 165 aa5.51□□□□□ -1.53
CDC42SE2-208ENST00000505065 ORMDL2Q53FV1 153 aa5.51□□□□□ -1.53
CDC42SE2-208ENST00000505065 IGLV5-45A0A087WSX0 123 aa5.5□□□□□ -1.53
CDC42SE2-208ENST00000505065 TRGC2P03986 189 aa5.5□□□□□ -1.53
CDC42SE2-208ENST00000505065 OR5A1Q8NGJ0 315 aa5.5□□□□□ -1.53
CDC42SE2-208ENST00000505065 FCER1GP30273 86 aa5.5□□□□□ -1.53
CDC42SE2-208ENST00000505065 AMTP48728 403 aa5.49□□□□□ -1.53
CDC42SE2-208ENST00000505065 MAPKAPK5-AS1Q8N8E1 139 aa5.49□□□□□ -1.53
CDC42SE2-208ENST00000505065 HIST1H2BKO60814 126 aa5.49□□□□□ -1.53
CDC42SE2-208ENST00000505065 HIST1H2BJP06899 126 aa5.49□□□□□ -1.53
CDC42SE2-208ENST00000505065 FGF6P10767 208 aa5.49□□□□□ -1.53
CDC42SE2-208ENST00000505065 HIST1H2BOP23527 126 aa5.49□□□□□ -1.53
CDC42SE2-208ENST00000505065 HIST1H2BBP33778 126 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms