RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 I3L3M4 83 aa6.58□□□□□ -1.36
TPM3-218ENST00000505010 FCER1GP30273 86 aa6.58□□□□□ -1.36
TPM3-218ENST00000505010 AKR1D1P51857 326 aa6.58□□□□□ -1.36
TPM3-218ENST00000505010 POLR2KP53803 58 aaKnown RBP6.58□□□□□ -1.36
TPM3-218ENST00000505010 RPL36AP83881 106 aaKnown RBP6.58□□□□□ -1.36
TPM3-218ENST00000505010 LAGE3Q14657 143 aa6.58□□□□□ -1.36
TPM3-218ENST00000505010 C12orf74Q32Q52 190 aa6.58□□□□□ -1.36
TPM3-218ENST00000505010 ZNRF2Q8NHG8 242 aa6.58□□□□□ -1.36
TPM3-218ENST00000505010 PHLDA1Q8WV24 401 aaPredicted RBP6.58□□□□□ -1.36
TPM3-218ENST00000505010 RPL36ALQ969Q0 106 aaKnown RBP6.58□□□□□ -1.36
TPM3-218ENST00000505010 PACRGQ96M98 296 aaPredicted RBP6.58□□□□□ -1.36
TPM3-218ENST00000505010 KIR2DL4Q99706 377 aa6.58□□□□□ -1.36
TPM3-218ENST00000505010 PRADC1Q9BSG0 188 aa6.58□□□□□ -1.36
TPM3-218ENST00000505010 HHLA3Q9XRX5 114 aa6.58□□□□□ -1.36
TPM3-218ENST00000505010 TRBV7-3A0A075B6L6 115 aa6.57□□□□□ -1.36
TPM3-218ENST00000505010 IGHV3-38A0A0C4DH36 116 aa6.57□□□□□ -1.36
TPM3-218ENST00000505010 TRBV27A0A0K0K1C4 114 aa6.57□□□□□ -1.36
TPM3-218ENST00000505010 LINC01546A6NGU7 62 aa6.57□□□□□ -1.36
TPM3-218ENST00000505010 NUDT3O95989 172 aa6.57□□□□□ -1.36
TPM3-218ENST00000505010 HBDP02042 147 aa6.57□□□□□ -1.36
TPM3-218ENST00000505010 CRYBA4P53673 196 aa6.57□□□□□ -1.36
TPM3-218ENST00000505010 NANOS2P60321 138 aaKnown RBP6.57□□□□□ -1.36
TPM3-218ENST00000505010 ORMDL2Q53FV1 153 aa6.57□□□□□ -1.36
TPM3-218ENST00000505010 OR10D4PQ8NGN7 298 aa6.57□□□□□ -1.36
TPM3-218ENST00000505010 C11orf45Q8TAV5 145 aa6.57□□□□□ -1.36
TPM3-218ENST00000505010 PRO0255Q9UI72 69 aa6.57□□□□□ -1.36
TPM3-218ENST00000505010 A0A0J9YY99 117 aa6.56□□□□□ -1.36
TPM3-218ENST00000505010 K7EMI3 77 aa6.56□□□□□ -1.36
TPM3-218ENST00000505010 PAX4O43316 350 aa6.56□□□□□ -1.36
TPM3-218ENST00000505010 TSHBP01222 138 aa6.56□□□□□ -1.36
TPM3-218ENST00000505010 GYPEP15421 78 aa6.56□□□□□ -1.36
TPM3-218ENST00000505010 BTF3P20290 206 aaKnown RBP6.56□□□□□ -1.36
TPM3-218ENST00000505010 UBE2D3P61077 147 aa6.56□□□□□ -1.36
TPM3-218ENST00000505010 UBE2D2P62837 147 aa6.56□□□□□ -1.36
TPM3-218ENST00000505010 Q6ZTC4 211 aa6.56□□□□□ -1.36
TPM3-218ENST00000505010 KIAA1109Q2LD37 5005 aa6.55□□□□□ -1.36
TPM3-218ENST00000505010 TRAV26-1A0A087WT03 109 aa6.55□□□□□ -1.36
TPM3-218ENST00000505010 A0A096LNJ9 63 aa6.55□□□□□ -1.36
TPM3-218ENST00000505010 LEPROTL1O95214 131 aa6.55□□□□□ -1.36
TPM3-218ENST00000505010 COTL1Q14019 142 aa6.55□□□□□ -1.36
TPM3-218ENST00000505010 LINC00694P0DN24 101 aa6.54□□□□□ -1.36
TPM3-218ENST00000505010 KRTDAPP60985 99 aa6.54□□□□□ -1.36
TPM3-218ENST00000505010 LINC00173Q6ZV60 143 aa6.54□□□□□ -1.36
TPM3-218ENST00000505010 DAZ4Q86SG3 579 aaKnown RBP6.54□□□□□ -1.36
TPM3-218ENST00000505010 VSIG2Q96IQ7 327 aa6.54□□□□□ -1.36
TPM3-218ENST00000505010 DAZ3Q9NR90 486 aaKnown RBP6.54□□□□□ -1.36
TPM3-218ENST00000505010 HSPB8Q9UJY1 196 aa6.54□□□□□ -1.36
TPM3-218ENST00000505010 KMT2AQ03164 3969 aa6.54□□□□□ -1.36
TPM3-218ENST00000505010 DNAH10Q8IVF4 4471 aa6.53□□□□□ -1.36
TPM3-218ENST00000505010 C2orf66Q6UXQ4 117 aa6.53□□□□□ -1.36
TPM3-218ENST00000505010 CYSLTR1Q9Y271 337 aa6.53□□□□□ -1.36
TPM3-218ENST00000505010 HECTD4Q9Y4D8 3996 aa6.52□□□□□ -1.37
TPM3-218ENST00000505010 DEFB131BA0A096LNP1 70 aa6.52□□□□□ -1.37
TPM3-218ENST00000505010 A0A096LPF7 62 aa6.52□□□□□ -1.37
TPM3-218ENST00000505010 H0Y8G0 127 aa6.52□□□□□ -1.37
TPM3-218ENST00000505010 G0S2P27469 103 aa6.52□□□□□ -1.37
TPM3-218ENST00000505010 RPL39P62891 51 aaKnown RBP6.52□□□□□ -1.37
TPM3-218ENST00000505010 TOMM6Q96B49 74 aa6.52□□□□□ -1.37
TPM3-218ENST00000505010 MAP1LC3CQ9BXW4 147 aa6.52□□□□□ -1.37
TPM3-218ENST00000505010 ICOSQ9Y6W8 199 aa6.52□□□□□ -1.37
TPM3-218ENST00000505010 TRAV10A0A0B4J240 114 aa6.51□□□□□ -1.37
TPM3-218ENST00000505010 ATP5LO75964 103 aa6.51□□□□□ -1.37
TPM3-218ENST00000505010 C3orf79P0CE67 100 aa6.51□□□□□ -1.37
TPM3-218ENST00000505010 C20orf203Q8NBC4 194 aa6.51□□□□□ -1.37
TPM3-218ENST00000505010 ATP6V0E2Q8NHE4 81 aa6.51□□□□□ -1.37
TPM3-218ENST00000505010 SCGB3A1Q96QR1 104 aa6.51□□□□□ -1.37
TPM3-218ENST00000505010 CHCHD7Q9BUK0 85 aa6.51□□□□□ -1.37
TPM3-218ENST00000505010 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.5□□□□□ -1.37
TPM3-218ENST00000505010 IGKV2-29A2NJV5 120 aaPredicted RBP6.5□□□□□ -1.37
TPM3-218ENST00000505010 SCGB1D1O95968 90 aa6.5□□□□□ -1.37
TPM3-218ENST00000505010 MRPL23Q16540 153 aaKnown RBP6.5□□□□□ -1.37
TPM3-218ENST00000505010 TMEM97Q5BJF2 176 aa6.5□□□□□ -1.37
TPM3-218ENST00000505010 NTM-AS1Q6ZSK4 140 aa6.5□□□□□ -1.37
TPM3-218ENST00000505010 IFI27L1Q96BM0 104 aa6.5□□□□□ -1.37
TPM3-218ENST00000505010 TMEM243Q9BU79 118 aa6.5□□□□□ -1.37
TPM3-218ENST00000505010 TRBV25-1A0A075B6N4 114 aa6.49□□□□□ -1.37
TPM3-218ENST00000505010 LINC01549A6NIU2 74 aa6.49□□□□□ -1.37
TPM3-218ENST00000505010 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.49□□□□□ -1.37
TPM3-218ENST00000505010 SYS1-DBNDD2H3BUS1 97 aa6.49□□□□□ -1.37
TPM3-218ENST00000505010 UBE2L6O14933 153 aa6.49□□□□□ -1.37
TPM3-218ENST00000505010 LY6G6CO95867 125 aa6.49□□□□□ -1.37
TPM3-218ENST00000505010 Q6ZN92 141 aa6.49□□□□□ -1.37
TPM3-218ENST00000505010 LINC00476Q8WZB0 136 aa6.49□□□□□ -1.37
TPM3-218ENST00000505010 GTSF1LQ9H1H1 148 aa6.49□□□□□ -1.37
TPM3-218ENST00000505010 TRBV6-8A0A0A6YYG3 113 aa6.48□□□□□ -1.37
TPM3-218ENST00000505010 C20orf202A1L168 122 aa6.48□□□□□ -1.37
TPM3-218ENST00000505010 H3BNG1 76 aa6.48□□□□□ -1.37
TPM3-218ENST00000505010 PRSS1P07477 247 aa6.48□□□□□ -1.37
TPM3-218ENST00000505010 SMIM6P0DI80 62 aa6.48□□□□□ -1.37
TPM3-218ENST00000505010 JOSD1Q15040 202 aaPredicted RBP6.48□□□□□ -1.37
TPM3-218ENST00000505010 ERASQ7Z444 233 aa6.48□□□□□ -1.37
TPM3-218ENST00000505010 SH2D6Q7Z4S9 175 aa6.48□□□□□ -1.37
TPM3-218ENST00000505010 SPATA12Q7Z6I5 190 aa6.48□□□□□ -1.37
TPM3-218ENST00000505010 TMEM141Q96I45 108 aa6.48□□□□□ -1.37
TPM3-218ENST00000505010 TIMM17AQ99595 171 aa6.48□□□□□ -1.37
TPM3-218ENST00000505010 CHCHD5Q9BSY4 110 aa6.48□□□□□ -1.37
TPM3-218ENST00000505010 IGIPA6NJ69 53 aa6.47□□□□□ -1.37
TPM3-218ENST00000505010 SMAGPQ0VAQ4 97 aa6.47□□□□□ -1.37
TPM3-218ENST00000505010 GAGE6Q13070 117 aa6.47□□□□□ -1.37
TPM3-218ENST00000505010 PYY3Q5JQD4 70 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms