RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 LGALS9O00182 355 aa3.26□□□□□ -1.89
UBE2D3-217ENST00000504211 CRXO43186 299 aaPredicted RBP3.26□□□□□ -1.89
UBE2D3-217ENST00000504211 ZNF207O43670 478 aaKnown RBP3.26□□□□□ -1.89
UBE2D3-217ENST00000504211 TRBV12-3P01733 135 aa3.26□□□□□ -1.89
UBE2D3-217ENST00000504211 IGHV3-11P01762 117 aa3.26□□□□□ -1.89
UBE2D3-217ENST00000504211 ORM1P02763 201 aa3.26□□□□□ -1.89
UBE2D3-217ENST00000504211 PPBPP02775 128 aa3.26□□□□□ -1.89
UBE2D3-217ENST00000504211 LGALS1P09382 135 aaKnown RBP3.26□□□□□ -1.89
UBE2D3-217ENST00000504211 C3orf79P0CE67 100 aa3.26□□□□□ -1.89
UBE2D3-217ENST00000504211 CACNG7P62955 275 aa3.26□□□□□ -1.89
UBE2D3-217ENST00000504211 ERCC8Q13216 396 aa3.26□□□□□ -1.89
UBE2D3-217ENST00000504211 FAM104BQ5XKR9 115 aa3.26□□□□□ -1.89
UBE2D3-217ENST00000504211 RNASEKQ6P5S7 137 aaKnown RBP3.26□□□□□ -1.89
UBE2D3-217ENST00000504211 MRPL52Q86TS9 123 aaKnown RBP3.26□□□□□ -1.89
UBE2D3-217ENST00000504211 ORMDL3Q8N138 153 aa3.26□□□□□ -1.89
UBE2D3-217ENST00000504211 ZNF738Q8NE65 137 aa3.26□□□□□ -1.89
UBE2D3-217ENST00000504211 OR10J6PQ8NGY7 276 aa3.26□□□□□ -1.89
UBE2D3-217ENST00000504211 Q8TAT8 98 aa3.26□□□□□ -1.89
UBE2D3-217ENST00000504211 RHPN1-AS1Q9BWJ2 59 aa3.26□□□□□ -1.89
UBE2D3-217ENST00000504211 TMSB15BA0A087X1C1 80 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 IGHV3-49A0A0A0MS15 119 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 TRAV21A0A0B4J279 112 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 IGHV1-24A0A0C4DH33 117 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 C20orf202A1L168 122 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 LINC01546A6NGU7 62 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 C2orf70A6NJV1 201 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 LEPROTL1O95214 131 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 NTF3P20783 257 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 KRTDAPP60985 99 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 SPATA12Q7Z6I5 190 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 FAM19A2Q8N3H0 131 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 DEFB125Q8N687 156 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 OR8A1Q8NGG7 326 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 C14orf144Q96I85 54 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 ODF3Q96PU9 254 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 TMEM70Q9BUB7 260 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 VAMP8Q9BV40 100 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 PRO1933Q9H354 126 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 HSPB8Q9UJY1 196 aa3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 HELZ2Q9BYK8 2649 aaKnown RBP3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 USP9XQ93008 2570 aaPredicted RBP3.25□□□□□ -1.89
UBE2D3-217ENST00000504211 MUC4Q99102 2169 aa3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 TRAV2A0A0B4J234 112 aa3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 TMEM213A2RRL7 107 aa3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 D6R8Y8 96 aa3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 TCF21O43680 179 aa3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 CKS2P33552 79 aa3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 KRTAP10-1P60331 282 aa3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 MRPL51Q4U2R6 128 aaKnown RBP3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 EBLN2Q6P2I7 272 aa3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 FA2HQ7L5A8 372 aa3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 SMIM15Q7Z3B0 74 aa3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 AMN1Q8IY45 258 aa3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 ZFAND2AQ8N6M9 145 aa3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 OR10AG1Q8NH19 301 aa3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 DCANP1Q8TF63 244 aa3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 PRELID3AQ96N28 172 aa3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 FOXC2Q99958 501 aa3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 MIEN1Q9BRT3 115 aa3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 MAP1LC3CQ9BXW4 147 aa3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 FBN2P35556 2912 aa3.24□□□□□ -1.89
UBE2D3-217ENST00000504211 SYS1-DBNDD2H3BUS1 97 aa3.23□□□□□ -1.89
UBE2D3-217ENST00000504211 CDKN1BP46527 198 aa3.23□□□□□ -1.89
UBE2D3-217ENST00000504211 SNRPD3P62318 126 aaKnown RBP3.23□□□□□ -1.89
UBE2D3-217ENST00000504211 TDRG1Q3Y452 100 aa3.23□□□□□ -1.89
UBE2D3-217ENST00000504211 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
UBE2D3-217ENST00000504211 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
UBE2D3-217ENST00000504211 PRR9Q5T870 116 aa3.23□□□□□ -1.89
UBE2D3-217ENST00000504211 MRAP2Q96G30 205 aa3.23□□□□□ -1.89
UBE2D3-217ENST00000504211 MS4A6AQ9H2W1 248 aa3.23□□□□□ -1.89
UBE2D3-217ENST00000504211 MAP1LC3AQ9H492 121 aa3.23□□□□□ -1.89
UBE2D3-217ENST00000504211 NXT2Q9NPJ8 142 aaKnown RBP3.23□□□□□ -1.89
UBE2D3-217ENST00000504211 UQCR10Q9UDW1 63 aa3.23□□□□□ -1.89
UBE2D3-217ENST00000504211 MYO18BQ8IUG5 2567 aa3.23□□□□□ -1.89
UBE2D3-217ENST00000504211 COL12A1Q99715 3063 aa3.23□□□□□ -1.89
UBE2D3-217ENST00000504211 SPTAN1Q13813 2472 aaKnown RBP3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 SVEP1Q4LDE5 3571 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 A0A0J9YX75 114 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 A8MTW9 85 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 K7EMI3 77 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 M0R143 59 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 M0R381 172 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 PPP1R17O96001 155 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 NPYP01303 97 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 HBDP02042 147 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 IGLC3P0DOY3 106 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 PRB4P10163 310 aaPredicted RBP3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 IFI27P40305 119 aaPredicted RBP3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 ASIPP42127 132 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 SYCNQ0VAF6 134 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 SPATA45Q537H7 98 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 PSMG4Q5JS54 123 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 SPANXN1Q5VSR9 72 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 LINC01545Q5VT33 79 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 IGFL1Q6UW32 110 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 C10orf99Q6UWK7 81 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 ZNF705AQ6ZN79 300 aaPredicted RBP3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 Q8N8P6 123 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 C4orf3Q8WVX3 66 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 C2orf88Q9BSF0 95 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms