RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 GAGE12JA6NER3 117 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 I3L3M4 83 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 K7EMI3 77 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 LEPROTL1O95214 131 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 CRYBA4P53673 196 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 KRTDAPP60985 99 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 DAD1P61803 113 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 GAGE1Q13065 139 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 GAGE4Q13068 117 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 GAGE5Q13069 117 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 JOSD1Q15040 202 aaPredicted RBP4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 GAGE13Q4V321 117 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 DEFB121Q5J5C9 76 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 NTM-AS1Q6ZSK4 140 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 ZNRF2Q8NHG8 242 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 PHLDA1Q8WV24 401 aaPredicted RBP4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 TOMM6Q96B49 74 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 VSIG2Q96IQ7 327 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 SPATA25Q9BR10 227 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 CHCHD7Q9BUK0 85 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 TNFRSF18Q9Y5U5 241 aa4.83□□□□□ -1.64
TOPBP1-203ENST00000503464 COL7A1Q02388 2944 aa4.82□□□□□ -1.64
TOPBP1-203ENST00000503464 TRBV7-3A0A075B6L6 115 aa4.82□□□□□ -1.64
TOPBP1-203ENST00000503464 NUDT3O95989 172 aa4.82□□□□□ -1.64
TOPBP1-203ENST00000503464 SMIM6P0DI80 62 aa4.82□□□□□ -1.64
TOPBP1-203ENST00000503464 BTF3P20290 206 aaKnown RBP4.82□□□□□ -1.64
TOPBP1-203ENST00000503464 RPL39P62891 51 aaKnown RBP4.82□□□□□ -1.64
TOPBP1-203ENST00000503464 RHOHQ15669 191 aa4.82□□□□□ -1.64
TOPBP1-203ENST00000503464 ORMDL2Q53FV1 153 aa4.82□□□□□ -1.64
TOPBP1-203ENST00000503464 C2orf66Q6UXQ4 117 aa4.82□□□□□ -1.64
TOPBP1-203ENST00000503464 LINC00518Q8N0U6 118 aa4.82□□□□□ -1.64
TOPBP1-203ENST00000503464 FAM104AQ969W3 186 aa4.82□□□□□ -1.64
TOPBP1-203ENST00000503464 KIR2DL4Q99706 377 aa4.82□□□□□ -1.64
TOPBP1-203ENST00000503464 HHLA3Q9XRX5 114 aa4.82□□□□□ -1.64
TOPBP1-203ENST00000503464 IGIPA6NJ69 53 aa4.81□□□□□ -1.64
TOPBP1-203ENST00000503464 SYS1-DBNDD2H3BUS1 97 aa4.81□□□□□ -1.64
TOPBP1-203ENST00000503464 ATP5G1P05496 136 aa4.81□□□□□ -1.64
TOPBP1-203ENST00000503464 NANOS2P60321 138 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-203ENST00000503464 RPL36AP83881 106 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-203ENST00000503464 Q6ZTC4 211 aa4.81□□□□□ -1.64
TOPBP1-203ENST00000503464 C20orf203Q8NBC4 194 aa4.81□□□□□ -1.64
TOPBP1-203ENST00000503464 RPL36ALQ969Q0 106 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-203ENST00000503464 IFI27L1Q96BM0 104 aa4.81□□□□□ -1.64
TOPBP1-203ENST00000503464 B9D2Q9BPU9 175 aa4.81□□□□□ -1.64
TOPBP1-203ENST00000503464 KRTAP4-9Q9BYQ8 210 aa4.81□□□□□ -1.64
TOPBP1-203ENST00000503464 PRO0255Q9UI72 69 aa4.81□□□□□ -1.64
TOPBP1-203ENST00000503464 HSPB8Q9UJY1 196 aa4.81□□□□□ -1.64
TOPBP1-203ENST00000503464 TRAV26-1A0A087WT03 109 aa4.8□□□□□ -1.64
TOPBP1-203ENST00000503464 A0A0J9YY99 117 aa4.8□□□□□ -1.64
TOPBP1-203ENST00000503464 TEX48A0A1B0GUV7 120 aa4.8□□□□□ -1.64
TOPBP1-203ENST00000503464 F5H768 121 aa4.8□□□□□ -1.64
TOPBP1-203ENST00000503464 GYPEP15421 78 aa4.8□□□□□ -1.64
TOPBP1-203ENST00000503464 HTN3P15516 51 aa4.8□□□□□ -1.64
TOPBP1-203ENST00000503464 ZC2HC1BQ5TFG8 222 aa4.8□□□□□ -1.64
TOPBP1-203ENST00000503464 C12orf57Q99622 126 aa4.8□□□□□ -1.64
TOPBP1-203ENST00000503464 OPRPNQ99935 248 aaPredicted RBP4.8□□□□□ -1.64
TOPBP1-203ENST00000503464 PRADC1Q9BSG0 188 aa4.8□□□□□ -1.64
TOPBP1-203ENST00000503464 ZMAT4Q9H898 229 aa4.8□□□□□ -1.64
TOPBP1-203ENST00000503464 DYNC2H1Q8NCM8 4307 aaKnown RBP4.8□□□□□ -1.64
TOPBP1-203ENST00000503464 MEGF8Q7Z7M0 2845 aa4.8□□□□□ -1.64
TOPBP1-203ENST00000503464 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.79□□□□□ -1.64
TOPBP1-203ENST00000503464 IGKV2-29A2NJV5 120 aaPredicted RBP4.79□□□□□ -1.64
TOPBP1-203ENST00000503464 PAX4O43316 350 aa4.79□□□□□ -1.64
TOPBP1-203ENST00000503464 ODF1Q14990 250 aa4.79□□□□□ -1.64
TOPBP1-203ENST00000503464 LINC01545Q5VT33 79 aa4.79□□□□□ -1.64
TOPBP1-203ENST00000503464 CEMP1Q6PRD7 247 aaPredicted RBP4.79□□□□□ -1.64
TOPBP1-203ENST00000503464 TEX43Q6ZNM6 134 aa4.79□□□□□ -1.64
TOPBP1-203ENST00000503464 DAZ4Q86SG3 579 aaKnown RBP4.79□□□□□ -1.64
TOPBP1-203ENST00000503464 BAALCQ8WXS3 180 aa4.79□□□□□ -1.64
TOPBP1-203ENST00000503464 SCGB3A1Q96QR1 104 aa4.79□□□□□ -1.64
TOPBP1-203ENST00000503464 PMCHL2Q9BQD1 86 aa4.79□□□□□ -1.64
TOPBP1-203ENST00000503464 MAP1LC3CQ9BXW4 147 aa4.79□□□□□ -1.64
TOPBP1-203ENST00000503464 DAZ3Q9NR90 486 aaKnown RBP4.79□□□□□ -1.64
TOPBP1-203ENST00000503464 CYSLTR1Q9Y271 337 aa4.79□□□□□ -1.64
TOPBP1-203ENST00000503464 IGLV4-3A0A075B6K6 122 aa4.78□□□□□ -1.64
TOPBP1-203ENST00000503464 A0A096LPF7 62 aa4.78□□□□□ -1.64
TOPBP1-203ENST00000503464 H0Y8G0 127 aa4.78□□□□□ -1.64
TOPBP1-203ENST00000503464 ATP5LO75964 103 aa4.78□□□□□ -1.64
TOPBP1-203ENST00000503464 SCGB1D1O95968 90 aa4.78□□□□□ -1.64
TOPBP1-203ENST00000503464 COTL1Q14019 142 aa4.78□□□□□ -1.64
TOPBP1-203ENST00000503464 MAJINQ3KP22 176 aa4.78□□□□□ -1.64
TOPBP1-203ENST00000503464 PET117Q6UWS5 81 aa4.78□□□□□ -1.64
TOPBP1-203ENST00000503464 ERASQ7Z444 233 aa4.78□□□□□ -1.64
TOPBP1-203ENST00000503464 ATOH7Q8N100 152 aa4.78□□□□□ -1.64
TOPBP1-203ENST00000503464 C11orf45Q8TAV5 145 aa4.78□□□□□ -1.64
TOPBP1-203ENST00000503464 TIMM17AQ99595 171 aa4.78□□□□□ -1.64
TOPBP1-203ENST00000503464 KRTAP4-2Q9BYR5 136 aa4.78□□□□□ -1.64
TOPBP1-203ENST00000503464 GTSF1LQ9H1H1 148 aa4.78□□□□□ -1.64
TOPBP1-203ENST00000503464 UBE2D4Q9Y2X8 147 aa4.78□□□□□ -1.64
TOPBP1-203ENST00000503464 STAB2Q8WWQ8 2551 aa4.78□□□□□ -1.64
TOPBP1-203ENST00000503464 TRBV6-8A0A0A6YYG3 113 aa4.77□□□□□ -1.65
TOPBP1-203ENST00000503464 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.77□□□□□ -1.65
TOPBP1-203ENST00000503464 DEFA6Q01524 100 aa4.77□□□□□ -1.65
TOPBP1-203ENST00000503464 LGALS9CQ6DKI2 356 aa4.77□□□□□ -1.65
TOPBP1-203ENST00000503464 Q6ZUT4 128 aa4.77□□□□□ -1.65
TOPBP1-203ENST00000503464 ATP6V0E2Q8NHE4 81 aa4.77□□□□□ -1.65
TOPBP1-203ENST00000503464 PYGO1Q9Y3Y4 419 aa4.77□□□□□ -1.65
TOPBP1-203ENST00000503464 DNAH7Q8WXX0 4024 aa4.77□□□□□ -1.65
TOPBP1-203ENST00000503464 IGLV4-69A0A075B6H9 119 aa4.76□□□□□ -1.65
TOPBP1-203ENST00000503464 A0A087WX48 190 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms