RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 TOMM6Q96B49 74 aa6.55□□□□□ -1.36
FN1-227ENST00000498719 SETD2Q9BYW2 2564 aaPredicted RBP6.54□□□□□ -1.36
FN1-227ENST00000498719 EPG5Q9HCE0 2579 aa6.54□□□□□ -1.36
FN1-227ENST00000498719 NIPBLQ6KC79 2804 aaeCLIP6.54□□□□□ -1.36
FN1-227ENST00000498719 TRAV12-3A0A0B4J271 114 aa6.54□□□□□ -1.36
FN1-227ENST00000498719 F8VRH5 84 aa6.54□□□□□ -1.36
FN1-227ENST00000498719 H3BUA1 57 aa6.54□□□□□ -1.36
FN1-227ENST00000498719 ORMDL2Q53FV1 153 aa6.54□□□□□ -1.36
FN1-227ENST00000498719 CEND1Q8N111 149 aa6.54□□□□□ -1.36
FN1-227ENST00000498719 DCANP1Q8TF63 244 aa6.54□□□□□ -1.36
FN1-227ENST00000498719 TMEM126AQ9H061 195 aa6.54□□□□□ -1.36
FN1-227ENST00000498719 NAV2Q8IVL1 2488 aa6.54□□□□□ -1.36
FN1-227ENST00000498719 USP24Q9UPU5 2620 aa6.54□□□□□ -1.36
FN1-227ENST00000498719 TRAV12-2A0A075B6T6 113 aa6.54□□□□□ -1.36
FN1-227ENST00000498719 ZNF688P0C7X2 276 aa6.54□□□□□ -1.36
FN1-227ENST00000498719 PLNP26678 52 aa6.54□□□□□ -1.36
FN1-227ENST00000498719 LINC00315P59091 139 aa6.54□□□□□ -1.36
FN1-227ENST00000498719 SONP18583 2426 aaKnown RBP6.53□□□□□ -1.36
FN1-227ENST00000498719 NBPF19A0A087WUL8 3843 aa6.53□□□□□ -1.36
FN1-227ENST00000498719 J3KT08 172 aa6.53□□□□□ -1.36
FN1-227ENST00000498719 DUSP14O95147 198 aaKnown RBP6.53□□□□□ -1.36
FN1-227ENST00000498719 AZU1P20160 251 aa6.53□□□□□ -1.36
FN1-227ENST00000498719 PMVKQ15126 192 aa6.53□□□□□ -1.36
FN1-227ENST00000498719 C6orf223Q8N319 242 aa6.53□□□□□ -1.36
FN1-227ENST00000498719 C20orf78Q9BR46 151 aa6.53□□□□□ -1.36
FN1-227ENST00000498719 KIF25-AS1Q9Y6Z4 181 aa6.53□□□□□ -1.36
FN1-227ENST00000498719 AKAP9Q99996 3911 aa6.53□□□□□ -1.36
FN1-227ENST00000498719 WNK1Q9H4A3 2382 aa6.53□□□□□ -1.36
FN1-227ENST00000498719 KLLNB2CW77 178 aa6.52□□□□□ -1.36
FN1-227ENST00000498719 CD7P09564 240 aa6.52□□□□□ -1.36
FN1-227ENST00000498719 FABP2P12104 132 aa6.52□□□□□ -1.36
FN1-227ENST00000498719 HLA-DRB4P13762 266 aa6.52□□□□□ -1.36
FN1-227ENST00000498719 DEFB112Q30KQ8 113 aa6.52□□□□□ -1.36
FN1-227ENST00000498719 TTC32Q5I0X7 151 aa6.52□□□□□ -1.36
FN1-227ENST00000498719 LINC00242Q5T6M2 205 aa6.52□□□□□ -1.36
FN1-227ENST00000498719 C9orf85Q96MD7 179 aa6.52□□□□□ -1.36
FN1-227ENST00000498719 HLA-DRB4X5D2U9 266 aa6.52□□□□□ -1.36
FN1-227ENST00000498719 TRAV12-1A0A0B4J245 112 aa6.52□□□□□ -1.37
FN1-227ENST00000498719 A0A0U1RQV1 116 aa6.52□□□□□ -1.37
FN1-227ENST00000498719 PSMB8P28062 276 aa6.52□□□□□ -1.37
FN1-227ENST00000498719 RPL39P62891 51 aaKnown RBP6.52□□□□□ -1.37
FN1-227ENST00000498719 PSMG4Q5JS54 123 aa6.52□□□□□ -1.37
FN1-227ENST00000498719 FAM74A4Q5TZK3 123 aa6.52□□□□□ -1.37
FN1-227ENST00000498719 HIST1H4GQ99525 98 aa6.52□□□□□ -1.37
FN1-227ENST00000498719 NOTCH3Q9UM47 2321 aa6.52□□□□□ -1.37
FN1-227ENST00000498719 B4DSR2 109 aa6.51□□□□□ -1.37
FN1-227ENST00000498719 CHCHD10Q8WYQ3 142 aaPredicted RBP6.51□□□□□ -1.37
FN1-227ENST00000498719 MDFICQ9P1T7 246 aa6.51□□□□□ -1.37
FN1-227ENST00000498719 GAGE12JA6NER3 117 aa6.51□□□□□ -1.37
FN1-227ENST00000498719 TSHBP01222 138 aa6.51□□□□□ -1.37
FN1-227ENST00000498719 SUMO4Q6EEV6 95 aa6.51□□□□□ -1.37
FN1-227ENST00000498719 C11orf72Q8NBR9 251 aa6.51□□□□□ -1.37
FN1-227ENST00000498719 PLAC8L1A1L4L8 177 aa6.5□□□□□ -1.37
FN1-227ENST00000498719 NXPH4O95158 308 aa6.5□□□□□ -1.37
FN1-227ENST00000498719 SLC25A16P16260 332 aa6.5□□□□□ -1.37
FN1-227ENST00000498719 KLHL30-AS1Q8NEE0 82 aa6.5□□□□□ -1.37
FN1-227ENST00000498719 PRADC1Q9BSG0 188 aa6.5□□□□□ -1.37
FN1-227ENST00000498719 CYSLTR1Q9Y271 337 aa6.5□□□□□ -1.37
FN1-227ENST00000498719 MYMXA0A1B0GTQ4 84 aa6.5□□□□□ -1.37
FN1-227ENST00000498719 KRTAP23-1A1A580 65 aa6.5□□□□□ -1.37
FN1-227ENST00000498719 E9PLD3 99 aa6.5□□□□□ -1.37
FN1-227ENST00000498719 GAGE7O76087 117 aa6.5□□□□□ -1.37
FN1-227ENST00000498719 GAGE12FP0CL80 117 aa6.5□□□□□ -1.37
FN1-227ENST00000498719 GAGE12GP0CL81 117 aa6.5□□□□□ -1.37
FN1-227ENST00000498719 GAGE12IP0CL82 117 aa6.5□□□□□ -1.37
FN1-227ENST00000498719 SYNJ2BPP57105 145 aa6.5□□□□□ -1.37
FN1-227ENST00000498719 GAGE4Q13068 117 aa6.5□□□□□ -1.37
FN1-227ENST00000498719 SPINK13Q1W4C9 94 aa6.5□□□□□ -1.37
FN1-227ENST00000498719 C12orf74Q32Q52 190 aa6.5□□□□□ -1.37
FN1-227ENST00000498719 HRCT1Q6UXD1 115 aa6.5□□□□□ -1.37
FN1-227ENST00000498719 UBR5O95071 2799 aaPredicted RBP6.49□□□□□ -1.37
FN1-227ENST00000498719 TRBV7-3A0A075B6L6 115 aa6.49□□□□□ -1.37
FN1-227ENST00000498719 IGLL5B9A064 214 aa6.49□□□□□ -1.37
FN1-227ENST00000498719 LGALS1P09382 135 aaKnown RBP6.49□□□□□ -1.37
FN1-227ENST00000498719 ZFP2Q6ZN57 461 aa6.49□□□□□ -1.37
FN1-227ENST00000498719 OR5A1Q8NGJ0 315 aa6.49□□□□□ -1.37
FN1-227ENST00000498719 PLEKHB2Q96CS7 222 aa6.49□□□□□ -1.37
FN1-227ENST00000498719 APCP25054 2843 aa6.49□□□□□ -1.37
FN1-227ENST00000498719 A0A1B0GX51 115 aa6.49□□□□□ -1.37
FN1-227ENST00000498719 SDHAF1A6NFY7 115 aa6.49□□□□□ -1.37
FN1-227ENST00000498719 C11orf86A6NJI1 115 aa6.49□□□□□ -1.37
FN1-227ENST00000498719 POLR2KP53803 58 aaKnown RBP6.49□□□□□ -1.37
FN1-227ENST00000498719 AMTNQ6UX39 209 aa6.49□□□□□ -1.37
FN1-227ENST00000498719 POM121L12Q8N7R1 296 aa6.49□□□□□ -1.37
FN1-227ENST00000498719 CCDC168Q8NDH2 2452 aa6.49□□□□□ -1.37
FN1-227ENST00000498719 IGLV4-69A0A075B6H9 119 aa6.48□□□□□ -1.37
FN1-227ENST00000498719 IGHV4OR15-8A0A075B7B6 117 aa6.48□□□□□ -1.37
FN1-227ENST00000498719 A0A087WW49 117 aa6.48□□□□□ -1.37
FN1-227ENST00000498719 RPS28P62857 69 aaKnown RBP6.48□□□□□ -1.37
FN1-227ENST00000498719 NACAE9PAV3 2078 aa6.48□□□□□ -1.37
FN1-227ENST00000498719 IGHV3-16A0A0C4DH30 117 aa6.48□□□□□ -1.37
FN1-227ENST00000498719 A0A0J9YX75 114 aa6.48□□□□□ -1.37
FN1-227ENST00000498719 IGIPA6NJ69 53 aa6.48□□□□□ -1.37
FN1-227ENST00000498719 ZNF815PA8K554 130 aa6.48□□□□□ -1.37
FN1-227ENST00000498719 H3BMG7 143 aa6.48□□□□□ -1.37
FN1-227ENST00000498719 CARD19Q96LW7 228 aa6.48□□□□□ -1.37
FN1-227ENST00000498719 OPRPNQ99935 248 aaPredicted RBP6.48□□□□□ -1.37
FN1-227ENST00000498719 RBM12B-AS1Q9P1G2 102 aa6.48□□□□□ -1.37
FN1-227ENST00000498719 CR1P17927 2039 aa6.48□□□□□ -1.37
FN1-227ENST00000498719 PPP1R17O96001 155 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms