RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 CELA1Q9UNI1 258 aa3.38□□□□□ -1.87
CMSS1-209ENST00000497345 A0A096LPF7 62 aa3.37□□□□□ -1.87
CMSS1-209ENST00000497345 IGHV1-24A0A0C4DH33 117 aa3.37□□□□□ -1.87
CMSS1-209ENST00000497345 SMIM9A6NGZ8 99 aa3.37□□□□□ -1.87
CMSS1-209ENST00000497345 F5H768 121 aa3.37□□□□□ -1.87
CMSS1-209ENST00000497345 M0QY20 66 aa3.37□□□□□ -1.87
CMSS1-209ENST00000497345 FCER1GP30273 86 aa3.37□□□□□ -1.87
CMSS1-209ENST00000497345 TIRAPP58753 221 aa3.37□□□□□ -1.87
CMSS1-209ENST00000497345 KRTAP10-6P60371 365 aaPredicted RBP3.37□□□□□ -1.87
CMSS1-209ENST00000497345 DAD1P61803 113 aa3.37□□□□□ -1.87
CMSS1-209ENST00000497345 DAZ2Q13117 558 aaKnown RBP3.37□□□□□ -1.87
CMSS1-209ENST00000497345 COA6Q5JTJ3 125 aaKnown RBP3.37□□□□□ -1.87
CMSS1-209ENST00000497345 Q8N8P6 123 aa3.37□□□□□ -1.87
CMSS1-209ENST00000497345 ZNRF2Q8NHG8 242 aa3.37□□□□□ -1.87
CMSS1-209ENST00000497345 SMIM2Q9BVW6 85 aa3.37□□□□□ -1.87
CMSS1-209ENST00000497345 NOTCH1P46531 2555 aa3.36□□□□□ -1.87
CMSS1-209ENST00000497345 TRAV4A0A0B4J268 109 aa3.36□□□□□ -1.87
CMSS1-209ENST00000497345 A0A0J9YWU9 116 aa3.36□□□□□ -1.87
CMSS1-209ENST00000497345 SDHAF1A6NFY7 115 aa3.36□□□□□ -1.87
CMSS1-209ENST00000497345 H7C1H1 209 aa3.36□□□□□ -1.87
CMSS1-209ENST00000497345 RHODO00212 210 aa3.36□□□□□ -1.87
CMSS1-209ENST00000497345 VCYO14598 125 aa3.36□□□□□ -1.87
CMSS1-209ENST00000497345 SPART-AS1P0CW21 52 aa3.36□□□□□ -1.87
CMSS1-209ENST00000497345 MIFP14174 115 aa3.36□□□□□ -1.87
CMSS1-209ENST00000497345 LAGE3Q14657 143 aa3.36□□□□□ -1.87
CMSS1-209ENST00000497345 LGALS9BQ3B8N2 356 aa3.36□□□□□ -1.87
CMSS1-209ENST00000497345 UFSP1Q6NVU6 142 aa3.36□□□□□ -1.87
CMSS1-209ENST00000497345 ATOH7Q8N100 152 aa3.36□□□□□ -1.87
CMSS1-209ENST00000497345 SLC25A29Q8N8R3 303 aa3.36□□□□□ -1.87
CMSS1-209ENST00000497345 Q8NAQ8 132 aa3.36□□□□□ -1.87
CMSS1-209ENST00000497345 NEXN-AS1Q8NBZ9 246 aa3.36□□□□□ -1.87
CMSS1-209ENST00000497345 CHCHD1Q96BP2 118 aaKnown RBP3.36□□□□□ -1.87
CMSS1-209ENST00000497345 PMCHL2Q9BQD1 86 aa3.36□□□□□ -1.87
CMSS1-209ENST00000497345 NXT2Q9NPJ8 142 aaKnown RBP3.36□□□□□ -1.87
CMSS1-209ENST00000497345 NIT2Q9NQR4 276 aa3.36□□□□□ -1.87
CMSS1-209ENST00000497345 NBEAL2Q6ZNJ1 2754 aa3.36□□□□□ -1.87
CMSS1-209ENST00000497345 PKD1L1Q8TDX9 2849 aa3.35□□□□□ -1.87
CMSS1-209ENST00000497345 K7EQD1 137 aa3.35□□□□□ -1.87
CMSS1-209ENST00000497345 LEPROTL1O95214 131 aa3.35□□□□□ -1.87
CMSS1-209ENST00000497345 PPP1R17O96001 155 aa3.35□□□□□ -1.87
CMSS1-209ENST00000497345 C3orf79P0CE67 100 aa3.35□□□□□ -1.87
CMSS1-209ENST00000497345 TCTAP57738 103 aa3.35□□□□□ -1.87
CMSS1-209ENST00000497345 NANOS2P60321 138 aaKnown RBP3.35□□□□□ -1.87
CMSS1-209ENST00000497345 SPATA12Q7Z6I5 190 aa3.35□□□□□ -1.87
CMSS1-209ENST00000497345 PTH2Q96A98 100 aa3.35□□□□□ -1.87
CMSS1-209ENST00000497345 KIR2DL4Q99706 377 aa3.35□□□□□ -1.87
CMSS1-209ENST00000497345 C20orf78Q9BR46 151 aa3.35□□□□□ -1.87
CMSS1-209ENST00000497345 TMEM70Q9BUB7 260 aa3.35□□□□□ -1.87
CMSS1-209ENST00000497345 HHLA3Q9XRX5 114 aa3.35□□□□□ -1.87
CMSS1-209ENST00000497345 LAMTOR2Q9Y2Q5 125 aa3.35□□□□□ -1.87
CMSS1-209ENST00000497345 IGLV2-18A0A075B6J9 118 aa3.34□□□□□ -1.87
CMSS1-209ENST00000497345 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.34□□□□□ -1.87
CMSS1-209ENST00000497345 A0A096LNJ9 63 aa3.34□□□□□ -1.87
CMSS1-209ENST00000497345 IGKV2-29A2NJV5 120 aaPredicted RBP3.34□□□□□ -1.87
CMSS1-209ENST00000497345 PCP4L1A6NKN8 68 aa3.34□□□□□ -1.87
CMSS1-209ENST00000497345 LYRM9A8MSI8 78 aa3.34□□□□□ -1.87
CMSS1-209ENST00000497345 I3L3M4 83 aa3.34□□□□□ -1.87
CMSS1-209ENST00000497345 TSHBP01222 138 aa3.34□□□□□ -1.87
CMSS1-209ENST00000497345 HBDP02042 147 aa3.34□□□□□ -1.87
CMSS1-209ENST00000497345 PRSS1P07477 247 aa3.34□□□□□ -1.87
CMSS1-209ENST00000497345 ESDP10768 282 aa3.34□□□□□ -1.87
CMSS1-209ENST00000497345 POLR2KP53803 58 aaKnown RBP3.34□□□□□ -1.87
CMSS1-209ENST00000497345 RPL39P62891 51 aaKnown RBP3.34□□□□□ -1.87
CMSS1-209ENST00000497345 RPL36AP83881 106 aaKnown RBP3.34□□□□□ -1.87
CMSS1-209ENST00000497345 DEFA6Q01524 100 aa3.34□□□□□ -1.87
CMSS1-209ENST00000497345 C12orf74Q32Q52 190 aa3.34□□□□□ -1.87
CMSS1-209ENST00000497345 RNASE13Q5GAN3 156 aaKnown RBP3.34□□□□□ -1.87
CMSS1-209ENST00000497345 ZC2HC1BQ5TFG8 222 aa3.34□□□□□ -1.87
CMSS1-209ENST00000497345 CEMP1Q6PRD7 247 aaPredicted RBP3.34□□□□□ -1.87
CMSS1-209ENST00000497345 ZFP2Q6ZN57 461 aa3.34□□□□□ -1.87
CMSS1-209ENST00000497345 SCGB3A1Q96QR1 104 aa3.34□□□□□ -1.87
CMSS1-209ENST00000497345 C12orf57Q99622 126 aa3.34□□□□□ -1.87
CMSS1-209ENST00000497345 OPRPNQ99935 248 aaPredicted RBP3.34□□□□□ -1.87
CMSS1-209ENST00000497345 PRADC1Q9BSG0 188 aa3.34□□□□□ -1.87
CMSS1-209ENST00000497345 MAP1LC3CQ9BXW4 147 aa3.34□□□□□ -1.87
CMSS1-209ENST00000497345 HSPB8Q9UJY1 196 aa3.34□□□□□ -1.87
CMSS1-209ENST00000497345 TP53TG1Q9Y2A0 90 aa3.34□□□□□ -1.87
CMSS1-209ENST00000497345 MGAM2Q2M2H8 2515 aa3.33□□□□□ -1.88
CMSS1-209ENST00000497345 TRBV7-3A0A075B6L6 115 aa3.33□□□□□ -1.88
CMSS1-209ENST00000497345 TRAV26-1A0A087WT03 109 aa3.33□□□□□ -1.88
CMSS1-209ENST00000497345 IGKV3OR2-268A0A0C4DH90 116 aa3.33□□□□□ -1.88
CMSS1-209ENST00000497345 TRBV6-5A0A0K0K1A5 114 aa3.33□□□□□ -1.88
CMSS1-209ENST00000497345 A8MZ25 164 aa3.33□□□□□ -1.88
CMSS1-209ENST00000497345 ATP5G1P05496 136 aa3.33□□□□□ -1.88
CMSS1-209ENST00000497345 GAGE6Q13070 117 aa3.33□□□□□ -1.88
CMSS1-209ENST00000497345 COTL1Q14019 142 aa3.33□□□□□ -1.88
CMSS1-209ENST00000497345 RHOHQ15669 191 aa3.33□□□□□ -1.88
CMSS1-209ENST00000497345 ORMDL2Q53FV1 153 aa3.33□□□□□ -1.88
CMSS1-209ENST00000497345 PYY3Q5JQD4 70 aa3.33□□□□□ -1.88
CMSS1-209ENST00000497345 PIK3CD-AS1Q5SR53 167 aa3.33□□□□□ -1.88
CMSS1-209ENST00000497345 KPRPQ5T749 579 aaPredicted RBP3.33□□□□□ -1.88
CMSS1-209ENST00000497345 C2orf66Q6UXQ4 117 aa3.33□□□□□ -1.88
CMSS1-209ENST00000497345 Q6ZTC4 211 aa3.33□□□□□ -1.88
CMSS1-209ENST00000497345 C11orf45Q8TAV5 145 aa3.33□□□□□ -1.88
CMSS1-209ENST00000497345 IFI27L1Q96BM0 104 aa3.33□□□□□ -1.88
CMSS1-209ENST00000497345 DNAJC30Q96LL9 226 aa3.33□□□□□ -1.88
CMSS1-209ENST00000497345 PRO1933Q9H354 126 aa3.33□□□□□ -1.88
CMSS1-209ENST00000497345 TRBV6-4A0A1B0GX49 114 aa3.32□□□□□ -1.88
CMSS1-209ENST00000497345 PRSS47A8MTI9 375 aa3.32□□□□□ -1.88
CMSS1-209ENST00000497345 SYS1-DBNDD2H3BUS1 97 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 261.2 ms