RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 GAGE12GP0CL81 117 aa14.27□□□□□ -0.12
LINC01558-202ENST00000495520 GAGE12IP0CL82 117 aa14.27□□□□□ -0.12
LINC01558-202ENST00000495520 STPG4Q8N801 248 aa14.27□□□□□ -0.12
LINC01558-202ENST00000495520 PRSS29PA6NIE9 313 aa14.26□□□□□ -0.13
LINC01558-202ENST00000495520 K7EQD1 137 aa14.26□□□□□ -0.13
LINC01558-202ENST00000495520 COX8AP10176 69 aa14.26□□□□□ -0.13
LINC01558-202ENST00000495520 PRB2P02812 416 aaPredicted RBP14.25□□□□□ -0.13
LINC01558-202ENST00000495520 PLNP26678 52 aa14.25□□□□□ -0.13
LINC01558-202ENST00000495520 MRPS16Q9Y3D3 137 aaKnown RBP14.25□□□□□ -0.13
LINC01558-202ENST00000495520 CHTOPQ9Y3Y2 248 aaKnown RBP14.25□□□□□ -0.13
LINC01558-202ENST00000495520 TRBV7-3A0A075B6L6 115 aa14.24□□□□□ -0.13
LINC01558-202ENST00000495520 TRGV2A0A075B6R0 118 aa14.24□□□□□ -0.13
LINC01558-202ENST00000495520 SLC25A34Q6PIV7 304 aa14.24□□□□□ -0.13
LINC01558-202ENST00000495520 SLC25A29Q8N8R3 303 aa14.24□□□□□ -0.13
LINC01558-202ENST00000495520 CHCHD7Q9BUK0 85 aa14.24□□□□□ -0.13
LINC01558-202ENST00000495520 PYGO1Q9Y3Y4 419 aa14.24□□□□□ -0.13
LINC01558-202ENST00000495520 TRBV6-4A0A1B0GX49 114 aa14.23□□□□□ -0.13
LINC01558-202ENST00000495520 NPSP0C0P6 89 aa14.23□□□□□ -0.13
LINC01558-202ENST00000495520 HNRNPA3P51991 378 aaKnown RBP14.23□□□□□ -0.13
LINC01558-202ENST00000495520 PMVKQ15126 192 aa14.23□□□□□ -0.13
LINC01558-202ENST00000495520 KPRPQ5T749 579 aaPredicted RBP14.23□□□□□ -0.13
LINC01558-202ENST00000495520 CST9LQ9H4G1 147 aa14.23□□□□□ -0.13
LINC01558-202ENST00000495520 FGF6P10767 208 aa14.22□□□□□ -0.13
LINC01558-202ENST00000495520 RPL36AP83881 106 aaKnown RBP14.22□□□□□ -0.13
LINC01558-202ENST00000495520 FHL2Q14192 279 aa14.22□□□□□ -0.13
LINC01558-202ENST00000495520 ZNRF2Q8NHG8 242 aa14.22□□□□□ -0.13
LINC01558-202ENST00000495520 RPL36ALQ969Q0 106 aaKnown RBP14.22□□□□□ -0.13
LINC01558-202ENST00000495520 SNHG12Q9BXW3 62 aa14.22□□□□□ -0.13
LINC01558-202ENST00000495520 A8MZ25 164 aa14.21□□□□□ -0.13
LINC01558-202ENST00000495520 M0R143 59 aa14.21□□□□□ -0.13
LINC01558-202ENST00000495520 UBE2D3P61077 147 aa14.21□□□□□ -0.13
LINC01558-202ENST00000495520 UBE2D2P62837 147 aa14.21□□□□□ -0.13
LINC01558-202ENST00000495520 LBHQ53QV2 105 aaPredicted RBP14.21□□□□□ -0.13
LINC01558-202ENST00000495520 MGAM2Q2M2H8 2515 aa14.21□□□□□ -0.14
LINC01558-202ENST00000495520 DLEU1O43261 78 aa14.2□□□□□ -0.14
LINC01558-202ENST00000495520 EMP1P54849 157 aa14.2□□□□□ -0.14
LINC01558-202ENST00000495520 COTL1Q14019 142 aa14.2□□□□□ -0.14
LINC01558-202ENST00000495520 DEFB135Q30KP9 77 aa14.2□□□□□ -0.14
LINC01558-202ENST00000495520 DAZ4Q86SG3 579 aaKnown RBP14.2□□□□□ -0.14
LINC01558-202ENST00000495520 FAM104AQ969W3 186 aa14.2□□□□□ -0.14
LINC01558-202ENST00000495520 DAZ3Q9NR90 486 aaKnown RBP14.2□□□□□ -0.14
LINC01558-202ENST00000495520 CRYBA4P53673 196 aa14.2□□□□□ -0.14
LINC01558-202ENST00000495520 ZC2HC1BQ5TFG8 222 aa14.2□□□□□ -0.14
LINC01558-202ENST00000495520 BOD1L2Q8IYS8 172 aa14.2□□□□□ -0.14
LINC01558-202ENST00000495520 RNF183Q96D59 192 aa14.2□□□□□ -0.14
LINC01558-202ENST00000495520 IGLV4-69A0A075B6H9 119 aa14.19□□□□□ -0.14
LINC01558-202ENST00000495520 LYRM9A8MSI8 78 aa14.19□□□□□ -0.14
LINC01558-202ENST00000495520 EREGO14944 169 aa14.19□□□□□ -0.14
LINC01558-202ENST00000495520 OR11H2Q8NH07 326 aa14.19□□□□□ -0.14
LINC01558-202ENST00000495520 PHLDA1Q8WV24 401 aaPredicted RBP14.19□□□□□ -0.14
LINC01558-202ENST00000495520 IGLV4-3A0A075B6K6 122 aa14.18□□□□□ -0.14
LINC01558-202ENST00000495520 IGHV3-38A0A0C4DH36 116 aa14.18□□□□□ -0.14
LINC01558-202ENST00000495520 NOTCH1P46531 2555 aa14.18□□□□□ -0.14
LINC01558-202ENST00000495520 C2orf88Q9BSF0 95 aa14.17□□□□□ -0.14
LINC01558-202ENST00000495520 SPANXA1Q9NS26 97 aa14.17□□□□□ -0.14
LINC01558-202ENST00000495520 TP73-AS1Q9UF72 201 aa14.17□□□□□ -0.14
LINC01558-202ENST00000495520 IGKV2D-26A0A0A0MRZ7 120 aa14.17□□□□□ -0.14
LINC01558-202ENST00000495520 TRGV4A0A0C4DH28 118 aa14.17□□□□□ -0.14
LINC01558-202ENST00000495520 MIFP14174 115 aa14.17□□□□□ -0.14
LINC01558-202ENST00000495520 PAPPA-AS1Q5QFB9 102 aa14.17□□□□□ -0.14
LINC01558-202ENST00000495520 OPRPNQ99935 248 aaPredicted RBP14.17□□□□□ -0.14
LINC01558-202ENST00000495520 DNAH3Q8TD57 4116 aa14.16□□□□□ -0.14
LINC01558-202ENST00000495520 K7EIL1 84 aa14.16□□□□□ -0.14
LINC01558-202ENST00000495520 LINC00694P0DN24 101 aa14.16□□□□□ -0.14
LINC01558-202ENST00000495520 Q8NAQ8 132 aa14.16□□□□□ -0.14
LINC01558-202ENST00000495520 AMELXQ99217 191 aa14.16□□□□□ -0.14
LINC01558-202ENST00000495520 UBE2D4Q9Y2X8 147 aa14.16□□□□□ -0.14
LINC01558-202ENST00000495520 IGHV4-28A0A0C4DH34 117 aa14.15□□□□□ -0.14
LINC01558-202ENST00000495520 GAGE12JA6NER3 117 aa14.15□□□□□ -0.14
LINC01558-202ENST00000495520 DEFB130BP0DP73 79 aa14.15□□□□□ -0.14
LINC01558-202ENST00000495520 DEFB130AP0DP74 79 aa14.15□□□□□ -0.14
LINC01558-202ENST00000495520 GAGE1Q13065 139 aa14.15□□□□□ -0.14
LINC01558-202ENST00000495520 GAGE4Q13068 117 aa14.15□□□□□ -0.14
LINC01558-202ENST00000495520 GAGE5Q13069 117 aa14.15□□□□□ -0.14
LINC01558-202ENST00000495520 GAGE13Q4V321 117 aa14.15□□□□□ -0.14
LINC01558-202ENST00000495520 C2orf91Q6ZV80 131 aa14.15□□□□□ -0.14
LINC01558-202ENST00000495520 TIMM21Q9BVV7 248 aa14.15□□□□□ -0.14
LINC01558-202ENST00000495520 NBEAL1Q6ZS30 2694 aa14.15□□□□□ -0.14
LINC01558-202ENST00000495520 FAM222AQ5U5X8 452 aa14.14□□□□□ -0.15
LINC01558-202ENST00000495520 NTM-AS1Q6ZSK4 140 aa14.14□□□□□ -0.15
LINC01558-202ENST00000495520 PCP2Q8IVA1 136 aa14.14□□□□□ -0.15
LINC01558-202ENST00000495520 GTSF1LQ9H1H1 148 aa14.14□□□□□ -0.15
LINC01558-202ENST00000495520 SIVA1O15304 175 aa14.14□□□□□ -0.15
LINC01558-202ENST00000495520 DEFB121Q5J5C9 76 aa14.14□□□□□ -0.15
LINC01558-202ENST00000495520 NFE4Q86UQ8 179 aa14.14□□□□□ -0.15
LINC01558-202ENST00000495520 PRADC1Q9BSG0 188 aa14.14□□□□□ -0.15
LINC01558-202ENST00000495520 VCX2Q9H322 139 aa14.14□□□□□ -0.15
LINC01558-202ENST00000495520 C11orf86A6NJI1 115 aa14.13□□□□□ -0.15
LINC01558-202ENST00000495520 NMUP48645 174 aa14.13□□□□□ -0.15
LINC01558-202ENST00000495520 SBSPONQ8IVN8 264 aa14.13□□□□□ -0.15
LINC01558-202ENST00000495520 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.12□□□□□ -0.15
LINC01558-202ENST00000495520 IGKV2-29A2NJV5 120 aaPredicted RBP14.12□□□□□ -0.15
LINC01558-202ENST00000495520 LOC100131303A0A0U1RQF7 123 aa14.11□□□□□ -0.15
LINC01558-202ENST00000495520 TCTAP57738 103 aa14.11□□□□□ -0.15
LINC01558-202ENST00000495520 MRPS36P82909 103 aaKnown RBP14.11□□□□□ -0.15
LINC01558-202ENST00000495520 NBEAL2Q6ZNJ1 2754 aa14.1□□□□□ -0.15
LINC01558-202ENST00000495520 E9PLD3 99 aa14.1□□□□□ -0.15
LINC01558-202ENST00000495520 CEMP1Q6PRD7 247 aaPredicted RBP14.1□□□□□ -0.15
LINC01558-202ENST00000495520 CSDC2Q9Y534 153 aaKnown RBP14.1□□□□□ -0.15
LINC01558-202ENST00000495520 PRO0255Q9UI72 69 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms