RNA–Protein interactions for RNA: ENST00000495288.5

PSMB4-206, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 986 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-206ENST00000495288 VSIG2Q96IQ7 327 aa12.29□□□□□ -0.44
PSMB4-206ENST00000495288 PACRGQ96M98 296 aaPredicted RBP12.29□□□□□ -0.44
PSMB4-206ENST00000495288 DAZ3Q9NR90 486 aaKnown RBP12.29□□□□□ -0.44
PSMB4-206ENST00000495288 LEPROTL1O95214 131 aa12.28□□□□□ -0.44
PSMB4-206ENST00000495288 DNHD1Q96M86 4753 aa12.27□□□□□ -0.44
PSMB4-206ENST00000495288 A0A096LNJ9 63 aa12.27□□□□□ -0.45
PSMB4-206ENST00000495288 DEFB131BA0A096LNP1 70 aa12.27□□□□□ -0.45
PSMB4-206ENST00000495288 A0A096LPF7 62 aa12.26□□□□□ -0.45
PSMB4-206ENST00000495288 G0S2P27469 103 aa12.26□□□□□ -0.45
PSMB4-206ENST00000495288 LINC00173Q6ZV60 143 aa12.26□□□□□ -0.45
PSMB4-206ENST00000495288 ATP6V0E2Q8NHE4 81 aa12.26□□□□□ -0.45
PSMB4-206ENST00000495288 HSPB8Q9UJY1 196 aa12.26□□□□□ -0.45
PSMB4-206ENST00000495288 KRTDAPP60985 99 aa12.25□□□□□ -0.45
PSMB4-206ENST00000495288 C2orf66Q6UXQ4 117 aa12.25□□□□□ -0.45
PSMB4-206ENST00000495288 TRAV10A0A0B4J240 114 aa12.24□□□□□ -0.45
PSMB4-206ENST00000495288 SCGB3A1Q96QR1 104 aa12.24□□□□□ -0.45
PSMB4-206ENST00000495288 TENM3Q9P273 2699 aa12.24□□□□□ -0.45
PSMB4-206ENST00000495288 CYSLTR1Q9Y271 337 aa12.24□□□□□ -0.45
PSMB4-206ENST00000495288 ICOSQ9Y6W8 199 aa12.24□□□□□ -0.45
PSMB4-206ENST00000495288 LINC00694P0DN24 101 aa12.23□□□□□ -0.45
PSMB4-206ENST00000495288 RPL39P62891 51 aaKnown RBP12.23□□□□□ -0.45
PSMB4-206ENST00000495288 MRPL23Q16540 153 aaKnown RBP12.23□□□□□ -0.45
PSMB4-206ENST00000495288 TOMM6Q96B49 74 aa12.23□□□□□ -0.45
PSMB4-206ENST00000495288 NTM-AS1Q6ZSK4 140 aa12.22□□□□□ -0.45
PSMB4-206ENST00000495288 C20orf203Q8NBC4 194 aa12.22□□□□□ -0.45
PSMB4-206ENST00000495288 CHCHD7Q9BUK0 85 aa12.22□□□□□ -0.45
PSMB4-206ENST00000495288 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.21□□□□□ -0.45
PSMB4-206ENST00000495288 IGKV2-29A2NJV5 120 aaPredicted RBP12.21□□□□□ -0.45
PSMB4-206ENST00000495288 H0Y8G0 127 aa12.21□□□□□ -0.45
PSMB4-206ENST00000495288 C3orf79P0CE67 100 aa12.21□□□□□ -0.45
PSMB4-206ENST00000495288 MAP1LC3CQ9BXW4 147 aa12.21□□□□□ -0.45
PSMB4-206ENST00000495288 ATP5LO75964 103 aa12.2□□□□□ -0.46
PSMB4-206ENST00000495288 TMEM97Q5BJF2 176 aa12.2□□□□□ -0.46
PSMB4-206ENST00000495288 IFI27L1Q96BM0 104 aa12.2□□□□□ -0.46
PSMB4-206ENST00000495288 GTSF1LQ9H1H1 148 aa12.2□□□□□ -0.46
PSMB4-206ENST00000495288 SCGB1D1O95968 90 aa12.19□□□□□ -0.46
PSMB4-206ENST00000495288 SH2D6Q7Z4S9 175 aa12.19□□□□□ -0.46
PSMB4-206ENST00000495288 TMEM243Q9BU79 118 aa12.19□□□□□ -0.46
PSMB4-206ENST00000495288 TRBV25-1A0A075B6N4 114 aa12.18□□□□□ -0.46
PSMB4-206ENST00000495288 TRBV6-8A0A0A6YYG3 113 aa12.18□□□□□ -0.46
PSMB4-206ENST00000495288 LINC01549A6NIU2 74 aa12.18□□□□□ -0.46
PSMB4-206ENST00000495288 H3BNG1 76 aa12.18□□□□□ -0.46
PSMB4-206ENST00000495288 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.18□□□□□ -0.46
PSMB4-206ENST00000495288 PRSS1P07477 247 aa12.18□□□□□ -0.46
PSMB4-206ENST00000495288 ERASQ7Z444 233 aa12.18□□□□□ -0.46
PSMB4-206ENST00000495288 SYS1-DBNDD2H3BUS1 97 aa12.17□□□□□ -0.46
PSMB4-206ENST00000495288 UBE2L6O14933 153 aa12.17□□□□□ -0.46
PSMB4-206ENST00000495288 Q6ZN92 141 aa12.17□□□□□ -0.46
PSMB4-206ENST00000495288 CHCHD5Q9BSY4 110 aa12.17□□□□□ -0.46
PSMB4-206ENST00000495288 MEGF8Q7Z7M0 2845 aa12.16□□□□□ -0.46
PSMB4-206ENST00000495288 GAGE6Q13070 117 aa12.16□□□□□ -0.46
PSMB4-206ENST00000495288 TMEM141Q96I45 108 aa12.16□□□□□ -0.46
PSMB4-206ENST00000495288 HUWE1Q7Z6Z7 4374 aaKnown RBP12.16□□□□□ -0.46
PSMB4-206ENST00000495288 IGIPA6NJ69 53 aa12.15□□□□□ -0.46
PSMB4-206ENST00000495288 DGAT2L7PQ6IED9 249 aa12.15□□□□□ -0.46
PSMB4-206ENST00000495288 CEMP1Q6PRD7 247 aaPredicted RBP12.15□□□□□ -0.46
PSMB4-206ENST00000495288 OPRPNQ99935 248 aaPredicted RBP12.15□□□□□ -0.46
PSMB4-206ENST00000495288 IGLL5B9A064 214 aa12.14□□□□□ -0.47
PSMB4-206ENST00000495288 JOSD1Q15040 202 aaPredicted RBP12.14□□□□□ -0.47
PSMB4-206ENST00000495288 AMMECR1LQ6DCA0 310 aa12.14□□□□□ -0.47
PSMB4-206ENST00000495288 PET117Q6UWS5 81 aa12.14□□□□□ -0.47
PSMB4-206ENST00000495288 TMEM262E9PQX1 116 aa12.13□□□□□ -0.47
PSMB4-206ENST00000495288 FGF6P10767 208 aa12.13□□□□□ -0.47
PSMB4-206ENST00000495288 LYPD5Q6UWN5 251 aa12.13□□□□□ -0.47
PSMB4-206ENST00000495288 TIMM17AQ99595 171 aa12.13□□□□□ -0.47
PSMB4-206ENST00000495288 SPANXA1Q9NS26 97 aa12.13□□□□□ -0.47
PSMB4-206ENST00000495288 UBE2D4Q9Y2X8 147 aa12.13□□□□□ -0.47
PSMB4-206ENST00000495288 DNAH9Q9NYC9 4486 aa12.12□□□□□ -0.47
PSMB4-206ENST00000495288 C20orf202A1L168 122 aa12.12□□□□□ -0.47
PSMB4-206ENST00000495288 SMAGPQ0VAQ4 97 aa12.12□□□□□ -0.47
PSMB4-206ENST00000495288 PYY3Q5JQD4 70 aa12.12□□□□□ -0.47
PSMB4-206ENST00000495288 ZC2HC1BQ5TFG8 222 aa12.12□□□□□ -0.47
PSMB4-206ENST00000495288 SPATA12Q7Z6I5 190 aa12.12□□□□□ -0.47
PSMB4-206ENST00000495288 PMCHL2Q9BQD1 86 aa12.12□□□□□ -0.47
PSMB4-206ENST00000495288 PYGO1Q9Y3Y4 419 aa12.12□□□□□ -0.47
PSMB4-206ENST00000495288 H7C423 109 aa12.11□□□□□ -0.47
PSMB4-206ENST00000495288 BAALCQ8WXS3 180 aa12.11□□□□□ -0.47
PSMB4-206ENST00000495288 TMEM101Q96IK0 257 aa12.11□□□□□ -0.47
PSMB4-206ENST00000495288 TIMM21Q9BVV7 248 aa12.11□□□□□ -0.47
PSMB4-206ENST00000495288 IGLV4-3A0A075B6K6 122 aa12.1□□□□□ -0.47
PSMB4-206ENST00000495288 LELP1Q5T871 98 aa12.1□□□□□ -0.47
PSMB4-206ENST00000495288 Q8N976 141 aa12.1□□□□□ -0.47
PSMB4-206ENST00000495288 C15orf53Q8NAA6 179 aa12.1□□□□□ -0.47
PSMB4-206ENST00000495288 OR5A1Q8NGJ0 315 aa12.1□□□□□ -0.47
PSMB4-206ENST00000495288 VCX2Q9H322 139 aa12.1□□□□□ -0.47
PSMB4-206ENST00000495288 PRSS29PA6NIE9 313 aa12.09□□□□□ -0.47
PSMB4-206ENST00000495288 PMVKQ15126 192 aa12.09□□□□□ -0.47
PSMB4-206ENST00000495288 RNASE13Q5GAN3 156 aaKnown RBP12.09□□□□□ -0.47
PSMB4-206ENST00000495288 PAPPA-AS1Q5QFB9 102 aa12.09□□□□□ -0.47
PSMB4-206ENST00000495288 TRAV8-6A0A0B4J262 113 aa12.08□□□□□ -0.48
PSMB4-206ENST00000495288 TIRAPP58753 221 aa12.08□□□□□ -0.48
PSMB4-206ENST00000495288 ESRGQ1W209 222 aa12.08□□□□□ -0.48
PSMB4-206ENST00000495288 LINC01545Q5VT33 79 aa12.08□□□□□ -0.48
PSMB4-206ENST00000495288 MRPL52Q86TS9 123 aaKnown RBP12.08□□□□□ -0.48
PSMB4-206ENST00000495288 CST9LQ9H4G1 147 aa12.08□□□□□ -0.48
PSMB4-206ENST00000495288 A0A087WX48 190 aa12.07□□□□□ -0.48
PSMB4-206ENST00000495288 TRAV12-1A0A0B4J245 112 aa12.07□□□□□ -0.48
PSMB4-206ENST00000495288 SMIM6P0DI80 62 aa12.07□□□□□ -0.48
PSMB4-206ENST00000495288 LGALS9CQ6DKI2 356 aa12.07□□□□□ -0.48
PSMB4-206ENST00000495288 Q6ZUT4 128 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms