RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 DEFB4AO15263 64 aa9.95□□□□□ -0.82
GPC1-209ENST00000495100 RNASE1P07998 156 aaKnown RBP9.95□□□□□ -0.82
GPC1-209ENST00000495100 UNC79Q9P2D8 2635 aa9.95□□□□□ -0.82
GPC1-209ENST00000495100 PSMB8P28062 276 aa9.95□□□□□ -0.82
GPC1-209ENST00000495100 NOP10Q9NPE3 64 aaKnown RBP9.95□□□□□ -0.82
GPC1-209ENST00000495100 E9PLD3 99 aa9.94□□□□□ -0.82
GPC1-209ENST00000495100 TSHBP01222 138 aa9.94□□□□□ -0.82
GPC1-209ENST00000495100 TRGV11A0A075B6L2 103 aa9.94□□□□□ -0.82
GPC1-209ENST00000495100 G3V4G9 280 aa9.94□□□□□ -0.82
GPC1-209ENST00000495100 SOCS3O14543 225 aa9.94□□□□□ -0.82
GPC1-209ENST00000495100 NDUFA12Q9UI09 145 aa9.94□□□□□ -0.82
GPC1-209ENST00000495100 TSPAN13O95857 204 aa9.94□□□□□ -0.82
GPC1-209ENST00000495100 LENEPQ9Y5L5 61 aa9.94□□□□□ -0.82
GPC1-209ENST00000495100 M0QY20 66 aa9.93□□□□□ -0.82
GPC1-209ENST00000495100 UBE2L6O14933 153 aa9.93□□□□□ -0.82
GPC1-209ENST00000495100 CRYGDP07320 174 aa9.93□□□□□ -0.82
GPC1-209ENST00000495100 UFSP1Q6NVU6 142 aa9.93□□□□□ -0.82
GPC1-209ENST00000495100 Q6ZSN1 163 aa9.93□□□□□ -0.82
GPC1-209ENST00000495100 K7EQG2 157 aa9.93□□□□□ -0.82
GPC1-209ENST00000495100 HIVEP1P15822 2718 aa9.93□□□□□ -0.82
GPC1-209ENST00000495100 LINC01619G3V211 115 aa9.93□□□□□ -0.82
GPC1-209ENST00000495100 RBMY1A1P0DJD3 496 aaKnown RBP9.93□□□□□ -0.82
GPC1-209ENST00000495100 RBMY1CP0DJD4 496 aa9.93□□□□□ -0.82
GPC1-209ENST00000495100 RBMY1FQ15415 496 aaKnown RBP9.93□□□□□ -0.82
GPC1-209ENST00000495100 NBPF19A0A087WUL8 3843 aa9.92□□□□□ -0.82
GPC1-209ENST00000495100 Q6ZUT4 128 aa9.92□□□□□ -0.82
GPC1-209ENST00000495100 A8MWV9 139 aa9.92□□□□□ -0.82
GPC1-209ENST00000495100 TMEM238C9JI98 176 aa9.92□□□□□ -0.82
GPC1-209ENST00000495100 RS1O15537 224 aa9.92□□□□□ -0.82
GPC1-209ENST00000495100 PRO1854Q9UHT4 67 aa9.92□□□□□ -0.82
GPC1-209ENST00000495100 TCL1BO95988 128 aa9.91□□□□□ -0.82
GPC1-209ENST00000495100 IGLV1-40P01703 118 aa9.91□□□□□ -0.82
GPC1-209ENST00000495100 PSMG3-AS1Q96PY0 264 aa9.91□□□□□ -0.82
GPC1-209ENST00000495100 A0A0J9YY99 117 aa9.91□□□□□ -0.82
GPC1-209ENST00000495100 TM2D2Q9BX73 214 aa9.91□□□□□ -0.82
GPC1-209ENST00000495100 PEMTQ9UBM1 199 aa9.91□□□□□ -0.82
GPC1-209ENST00000495100 OR13C6PQ8NH95 151 aa9.91□□□□□ -0.82
GPC1-209ENST00000495100 CLEC2BQ92478 149 aa9.91□□□□□ -0.82
GPC1-209ENST00000495100 CHCHD5Q9BSY4 110 aa9.91□□□□□ -0.82
GPC1-209ENST00000495100 HIGD1BQ9P298 99 aa9.91□□□□□ -0.82
GPC1-209ENST00000495100 TRGV4A0A0C4DH28 118 aa9.9□□□□□ -0.82
GPC1-209ENST00000495100 KLLNB2CW77 178 aa9.9□□□□□ -0.82
GPC1-209ENST00000495100 GAGE6Q13070 117 aa9.9□□□□□ -0.82
GPC1-209ENST00000495100 Q6ZTI0 123 aa9.9□□□□□ -0.82
GPC1-209ENST00000495100 SVIPQ8NHG7 77 aa9.9□□□□□ -0.82
GPC1-209ENST00000495100 ZNF415Q09FC8 603 aa9.9□□□□□ -0.82
GPC1-209ENST00000495100 C20orf203Q8NBC4 194 aa9.9□□□□□ -0.82
GPC1-209ENST00000495100 TMEM141Q96I45 108 aa9.9□□□□□ -0.82
GPC1-209ENST00000495100 PFN2P35080 140 aa9.9□□□□□ -0.83
GPC1-209ENST00000495100 POLR2KP53803 58 aaKnown RBP9.9□□□□□ -0.83
GPC1-209ENST00000495100 C19orf54Q5BKX5 351 aa9.9□□□□□ -0.83
GPC1-209ENST00000495100 NTN5Q8WTR8 489 aaPredicted RBP9.9□□□□□ -0.83
GPC1-209ENST00000495100 SMR3AQ99954 134 aa9.9□□□□□ -0.83
GPC1-209ENST00000495100 CITED2Q99967 270 aaPredicted RBP9.9□□□□□ -0.83
GPC1-209ENST00000495100 LINC00467Q9BRT7 94 aa9.9□□□□□ -0.83
GPC1-209ENST00000495100 ZMAT4Q9H898 229 aa9.9□□□□□ -0.83
GPC1-209ENST00000495100 IGHV3-30-3P0DP02 117 aa9.89□□□□□ -0.83
GPC1-209ENST00000495100 PAPPA-AS1Q5QFB9 102 aa9.89□□□□□ -0.83
GPC1-209ENST00000495100 IGLV4-69A0A075B6H9 119 aa9.89□□□□□ -0.83
GPC1-209ENST00000495100 TRBV7-3A0A075B6L6 115 aa9.89□□□□□ -0.83
GPC1-209ENST00000495100 COX8CQ7Z4L0 72 aa9.89□□□□□ -0.83
GPC1-209ENST00000495100 CFC1BP0CG36 223 aa9.89□□□□□ -0.83
GPC1-209ENST00000495100 CFC1P0CG37 223 aa9.89□□□□□ -0.83
GPC1-209ENST00000495100 MORN3Q6PF18 240 aaPredicted RBP9.89□□□□□ -0.83
GPC1-209ENST00000495100 PRIMA1Q86XR5 153 aa9.89□□□□□ -0.83
GPC1-209ENST00000495100 NDUFA11Q86Y39 141 aa9.89□□□□□ -0.83
GPC1-209ENST00000495100 ATP6V0BQ99437 205 aa9.89□□□□□ -0.83
GPC1-209ENST00000495100 TRAV12-1A0A0B4J245 112 aa9.88□□□□□ -0.83
GPC1-209ENST00000495100 F8W1H4 67 aa9.88□□□□□ -0.83
GPC1-209ENST00000495100 SPANXB1Q9NS25 103 aaPredicted RBP9.88□□□□□ -0.83
GPC1-209ENST00000495100 CDKN2A-AS1Q9UH64 79 aa9.88□□□□□ -0.83
GPC1-209ENST00000495100 LOC100131303A0A0U1RQF7 123 aa9.88□□□□□ -0.83
GPC1-209ENST00000495100 INSP01308 110 aa9.88□□□□□ -0.83
GPC1-209ENST00000495100 IGLV4-3A0A075B6K6 122 aa9.87□□□□□ -0.83
GPC1-209ENST00000495100 IGIPA6NJ69 53 aa9.87□□□□□ -0.83
GPC1-209ENST00000495100 H3BMM0 161 aa9.87□□□□□ -0.83
GPC1-209ENST00000495100 RHODO00212 210 aa9.87□□□□□ -0.83
GPC1-209ENST00000495100 IGHV4-31P0DP07 118 aa9.87□□□□□ -0.83
GPC1-209ENST00000495100 LINC00315P59091 139 aa9.87□□□□□ -0.83
GPC1-209ENST00000495100 LYRM7Q5U5X0 104 aa9.87□□□□□ -0.83
GPC1-209ENST00000495100 M0R2P5 195 aa9.87□□□□□ -0.83
GPC1-209ENST00000495100 ZNF22P17026 224 aaPredicted RBP9.87□□□□□ -0.83
GPC1-209ENST00000495100 ZNF702PQ9H963 129 aa9.87□□□□□ -0.83
GPC1-209ENST00000495100 Q9H8V8 135 aa9.87□□□□□ -0.83
GPC1-209ENST00000495100 MAP6D1Q9H9H5 199 aa9.87□□□□□ -0.83
GPC1-209ENST00000495100 ELANEP08246 267 aa9.86□□□□□ -0.83
GPC1-209ENST00000495100 TRBV20-1A0A075B6N2 111 aa9.86□□□□□ -0.83
GPC1-209ENST00000495100 SLC25A20O43772 301 aa9.86□□□□□ -0.83
GPC1-209ENST00000495100 PF4P02776 101 aa9.86□□□□□ -0.83
GPC1-209ENST00000495100 C3orf56Q8N813 242 aa9.86□□□□□ -0.83
GPC1-209ENST00000495100 STAB1Q9NY15 2570 aa9.86□□□□□ -0.83
GPC1-209ENST00000495100 H3BUA1 57 aa9.86□□□□□ -0.83
GPC1-209ENST00000495100 ANKRD29Q8N6D5 301 aa9.86□□□□□ -0.83
GPC1-209ENST00000495100 RBMY1BA6NDE4 496 aaKnown RBP9.85□□□□□ -0.83
GPC1-209ENST00000495100 RBMY1EA6NEQ0 496 aaKnown RBP9.85□□□□□ -0.83
GPC1-209ENST00000495100 CCL24O00175 119 aa9.85□□□□□ -0.83
GPC1-209ENST00000495100 RBMY1DP0C7P1 496 aaKnown RBP9.85□□□□□ -0.83
GPC1-209ENST00000495100 C5orf38Q86SI9 138 aa9.85□□□□□ -0.83
GPC1-209ENST00000495100 IGHV4-4A0A075B6R2 117 aa9.85□□□□□ -0.83
GPC1-209ENST00000495100 K7EMT4 169 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms