RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 TMEM141Q96I45 108 aa11.25□□□□□ -0.61
SHISA5-216ENST00000494854 TIMM17AQ99595 171 aa11.25□□□□□ -0.61
SHISA5-216ENST00000494854 RHODO00212 210 aa11.25□□□□□ -0.61
SHISA5-216ENST00000494854 P0DMU3 169 aa11.25□□□□□ -0.61
SHISA5-216ENST00000494854 FAM231AP0DMU4 169 aa11.25□□□□□ -0.61
SHISA5-216ENST00000494854 FAM231CP0DMU5 169 aa11.25□□□□□ -0.61
SHISA5-216ENST00000494854 INSL3P51460 131 aa11.24□□□□□ -0.61
SHISA5-216ENST00000494854 LINC00469Q8N7U9 141 aa11.24□□□□□ -0.61
SHISA5-216ENST00000494854 IL17DQ8TAD2 202 aa11.24□□□□□ -0.61
SHISA5-216ENST00000494854 RS1O15537 224 aa11.23□□□□□ -0.61
SHISA5-216ENST00000494854 ZNF25P17030 456 aaPredicted RBP11.23□□□□□ -0.61
SHISA5-216ENST00000494854 RNASE8Q8TDE3 154 aaKnown RBP11.23□□□□□ -0.61
SHISA5-216ENST00000494854 GIG44P09565 113 aaPredicted RBP11.23□□□□□ -0.61
SHISA5-216ENST00000494854 PMVKQ15126 192 aa11.23□□□□□ -0.61
SHISA5-216ENST00000494854 TMEM97Q5BJF2 176 aa11.23□□□□□ -0.61
SHISA5-216ENST00000494854 Q6ZSN1 163 aa11.23□□□□□ -0.61
SHISA5-216ENST00000494854 TTTY13Q9BZ97 58 aa11.23□□□□□ -0.61
SHISA5-216ENST00000494854 TNFRSF18Q9Y5U5 241 aa11.23□□□□□ -0.61
SHISA5-216ENST00000494854 RPL35AP18077 110 aaKnown RBP11.22□□□□□ -0.61
SHISA5-216ENST00000494854 C20orf203Q8NBC4 194 aa11.22□□□□□ -0.61
SHISA5-216ENST00000494854 TMEM263Q8WUH6 116 aaKnown RBP11.22□□□□□ -0.61
SHISA5-216ENST00000494854 IGHV3-53P01767 116 aa11.21□□□□□ -0.61
SHISA5-216ENST00000494854 TRGV1A0A0A0MS02 117 aa11.2□□□□□ -0.62
SHISA5-216ENST00000494854 HSD52Q0P140 79 aa11.2□□□□□ -0.62
SHISA5-216ENST00000494854 C1QTNF4Q9BXJ3 329 aa11.2□□□□□ -0.62
SHISA5-216ENST00000494854 CST9LQ9H4G1 147 aa11.2□□□□□ -0.62
SHISA5-216ENST00000494854 Q9UF83 564 aa11.2□□□□□ -0.62
SHISA5-216ENST00000494854 IGLV4-69A0A075B6H9 119 aa11.19□□□□□ -0.62
SHISA5-216ENST00000494854 DEFB121Q5J5C9 76 aa11.19□□□□□ -0.62
SHISA5-216ENST00000494854 DNAJC30Q96LL9 226 aa11.19□□□□□ -0.62
SHISA5-216ENST00000494854 HIGD1BQ9P298 99 aa11.19□□□□□ -0.62
SHISA5-216ENST00000494854 TRAV8-6A0A0B4J262 113 aa11.19□□□□□ -0.62
SHISA5-216ENST00000494854 PAPPA-AS1Q5QFB9 102 aa11.19□□□□□ -0.62
SHISA5-216ENST00000494854 Q6ZVH6 145 aa11.19□□□□□ -0.62
SHISA5-216ENST00000494854 OR4C5Q8NGB2 326 aa11.19□□□□□ -0.62
SHISA5-216ENST00000494854 COX11Q9Y6N1 276 aa11.19□□□□□ -0.62
SHISA5-216ENST00000494854 TRBV25-1A0A075B6N4 114 aa11.18□□□□□ -0.62
SHISA5-216ENST00000494854 MAPKAPK5-AS1Q8N8E1 139 aa11.18□□□□□ -0.62
SHISA5-216ENST00000494854 C11orf86A6NJI1 115 aa11.17□□□□□ -0.62
SHISA5-216ENST00000494854 SEC11AP67812 179 aa11.17□□□□□ -0.62
SHISA5-216ENST00000494854 CSNK1G2-AS1Q8NCQ2 148 aa11.17□□□□□ -0.62
SHISA5-216ENST00000494854 E9PLD3 99 aa11.17□□□□□ -0.62
SHISA5-216ENST00000494854 EMP1P54849 157 aa11.17□□□□□ -0.62
SHISA5-216ENST00000494854 GAGE1Q13065 139 aa11.17□□□□□ -0.62
SHISA5-216ENST00000494854 Q6ZTI0 123 aa11.17□□□□□ -0.62
SHISA5-216ENST00000494854 OR11H2Q8NH07 326 aa11.17□□□□□ -0.62
SHISA5-216ENST00000494854 ORAOV1Q8WV07 137 aa11.17□□□□□ -0.62
SHISA5-216ENST00000494854 C16orf74Q96GX8 76 aa11.17□□□□□ -0.62
SHISA5-216ENST00000494854 OPRPNQ99935 248 aaPredicted RBP11.17□□□□□ -0.62
SHISA5-216ENST00000494854 TAX1BP3O14907 124 aa11.16□□□□□ -0.62
SHISA5-216ENST00000494854 DAZ2Q13117 558 aaKnown RBP11.16□□□□□ -0.62
SHISA5-216ENST00000494854 CHAC1Q9BUX1 264 aa11.16□□□□□ -0.62
SHISA5-216ENST00000494854 COL7A1Q02388 2944 aa11.16□□□□□ -0.62
SHISA5-216ENST00000494854 ZNF479Q96JC4 524 aa11.15□□□□□ -0.62
SHISA5-216ENST00000494854 B9D2Q9BPU9 175 aa11.15□□□□□ -0.62
SHISA5-216ENST00000494854 NOP10Q9NPE3 64 aaKnown RBP11.15□□□□□ -0.62
SHISA5-216ENST00000494854 IGLV4-3A0A075B6K6 122 aa11.15□□□□□ -0.62
SHISA5-216ENST00000494854 TRAV4A0A0B4J268 109 aa11.15□□□□□ -0.62
SHISA5-216ENST00000494854 PLAC8L1A1L4L8 177 aa11.15□□□□□ -0.62
SHISA5-216ENST00000494854 PYGO1Q9Y3Y4 419 aa11.15□□□□□ -0.62
SHISA5-216ENST00000494854 PRADC1Q9BSG0 188 aa11.14□□□□□ -0.63
SHISA5-216ENST00000494854 A6NDN8 102 aa11.13□□□□□ -0.63
SHISA5-216ENST00000494854 RRN3P1Q2M238 152 aa11.13□□□□□ -0.63
SHISA5-216ENST00000494854 ZNRF2Q8NHG8 242 aa11.13□□□□□ -0.63
SHISA5-216ENST00000494854 PHLDA1Q8WV24 401 aaPredicted RBP11.13□□□□□ -0.63
SHISA5-216ENST00000494854 CHCHD7Q9BUK0 85 aa11.13□□□□□ -0.63
SHISA5-216ENST00000494854 IGHV3-38A0A0C4DH36 116 aa11.13□□□□□ -0.63
SHISA5-216ENST00000494854 MYMXA0A1B0GTQ4 84 aa11.13□□□□□ -0.63
SHISA5-216ENST00000494854 HERVK_113P61574 105 aa11.13□□□□□ -0.63
SHISA5-216ENST00000494854 COTL1Q14019 142 aa11.13□□□□□ -0.63
SHISA5-216ENST00000494854 VCX2Q9H322 139 aa11.13□□□□□ -0.63
SHISA5-216ENST00000494854 NFE4Q86UQ8 179 aa11.12□□□□□ -0.63
SHISA5-216ENST00000494854 K7EQD1 137 aa11.11□□□□□ -0.63
SHISA5-216ENST00000494854 NPSP0C0P6 89 aa11.11□□□□□ -0.63
SHISA5-216ENST00000494854 TMEM170BQ5T4T1 132 aa11.11□□□□□ -0.63
SHISA5-216ENST00000494854 OVOL2Q9BRP0 275 aa11.11□□□□□ -0.63
SHISA5-216ENST00000494854 DNAH9Q9NYC9 4486 aa11.11□□□□□ -0.63
SHISA5-216ENST00000494854 TRBV7-3A0A075B6L6 115 aa11.11□□□□□ -0.63
SHISA5-216ENST00000494854 TRBV10-1A0A0K0K1A3 114 aa11.11□□□□□ -0.63
SHISA5-216ENST00000494854 FAM104AQ969W3 186 aa11.11□□□□□ -0.63
SHISA5-216ENST00000494854 GCSHP23434 173 aa11.1□□□□□ -0.63
SHISA5-216ENST00000494854 CRYBA4P53673 196 aa11.1□□□□□ -0.63
SHISA5-216ENST00000494854 AMELXQ99217 191 aa11.1□□□□□ -0.63
SHISA5-216ENST00000494854 UBE2D4Q9Y2X8 147 aa11.1□□□□□ -0.63
SHISA5-216ENST00000494854 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.09□□□□□ -0.63
SHISA5-216ENST00000494854 GAGE12BA1L429 117 aa11.09□□□□□ -0.63
SHISA5-216ENST00000494854 IGKV2-29A2NJV5 120 aaPredicted RBP11.09□□□□□ -0.63
SHISA5-216ENST00000494854 GAGE7O76087 117 aa11.09□□□□□ -0.63
SHISA5-216ENST00000494854 NHLRC4P0CG21 123 aaPredicted RBP11.09□□□□□ -0.63
SHISA5-216ENST00000494854 GAGE12FP0CL80 117 aa11.09□□□□□ -0.63
SHISA5-216ENST00000494854 GAGE12GP0CL81 117 aa11.09□□□□□ -0.63
SHISA5-216ENST00000494854 GAGE12IP0CL82 117 aa11.09□□□□□ -0.63
SHISA5-216ENST00000494854 RPL36AP83881 106 aaKnown RBP11.09□□□□□ -0.63
SHISA5-216ENST00000494854 CEMP1Q6PRD7 247 aaPredicted RBP11.09□□□□□ -0.63
SHISA5-216ENST00000494854 RPL36ALQ969Q0 106 aaKnown RBP11.09□□□□□ -0.63
SHISA5-216ENST00000494854 SPANXA1Q9NS26 97 aa11.09□□□□□ -0.63
SHISA5-216ENST00000494854 TRGV2A0A075B6R0 118 aa11.09□□□□□ -0.63
SHISA5-216ENST00000494854 ZNF815PA8K554 130 aa11.09□□□□□ -0.63
SHISA5-216ENST00000494854 TAL2Q16559 108 aa11.09□□□□□ -0.63
SHISA5-216ENST00000494854 CEND1Q8N111 149 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms